Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G403600.1 | Wheat | endoplasmic reticulum, extracellular | 97.96 | 97.96 |
| TraesCS5A01G398700.1 | Wheat | endoplasmic reticulum, extracellular | 94.9 | 94.9 |
| TraesCS5D01G408000.1 | Wheat | extracellular | 82.65 | 86.17 |
| Os03t0760800-01 | Rice | extracellular | 81.63 | 86.02 |
| EER90847 | Sorghum | extracellular | 80.61 | 84.95 |
| Zm00001d013222_P001 | Maize | extracellular | 76.53 | 78.12 |
| Solyc04g078200.2.1 | Tomato | extracellular | 48.98 | 73.85 |
| GSMUA_Achr6P11160_001 | Banana | extracellular | 64.29 | 69.23 |
| GSMUA_Achr6P02260_001 | Banana | extracellular | 62.24 | 67.03 |
| GSMUA_Achr10P... | Banana | extracellular | 61.22 | 65.93 |
| Solyc12g042500.1.1 | Tomato | extracellular | 59.18 | 65.91 |
| PGSC0003DMT400037423 | Potato | extracellular | 58.16 | 64.77 |
| Solyc12g042520.1.1 | Tomato | extracellular | 57.14 | 63.64 |
| GSMUA_Achr10P... | Banana | extracellular | 59.18 | 63.04 |
| Bra019917.1-P | Field mustard | cytosol | 41.84 | 62.12 |
| PGSC0003DMT400055426 | Potato | extracellular | 55.1 | 61.36 |
| VIT_18s0001g09460.t01 | Wine grape | extracellular | 55.1 | 61.36 |
| KRH52061 | Soybean | extracellular | 54.08 | 60.23 |
| KRH05612 | Soybean | extracellular | 52.04 | 57.95 |
| KRG91068 | Soybean | extracellular | 53.06 | 57.78 |
| KRH15429 | Soybean | extracellular | 51.02 | 56.82 |
| VIT_03s0091g00390.t01 | Wine grape | extracellular | 51.02 | 56.82 |
| KRH35705 | Soybean | extracellular | 52.04 | 56.67 |
| PGSC0003DMT400047535 | Potato | extracellular | 51.02 | 56.18 |
| CDY20617 | Canola | extracellular | 50.0 | 55.68 |
| CDY20958 | Canola | extracellular | 50.0 | 55.68 |
| Solyc08g005620.2.1 | Tomato | extracellular | 50.0 | 55.06 |
| AT2G39540.1 | Thale cress | extracellular | 47.96 | 54.02 |
| AT5G59845.1 | Thale cress | extracellular | 47.96 | 52.81 |
| CDX71072 | Canola | extracellular | 48.98 | 52.75 |
| CDX88727 | Canola | extracellular | 48.98 | 52.75 |
| Bra002526.1-P | Field mustard | extracellular | 48.98 | 52.17 |
| CDY31591 | Canola | extracellular | 48.98 | 52.17 |
| Bra002525.1-P | Field mustard | extracellular | 48.98 | 52.17 |
| CDX80223 | Canola | extracellular | 48.98 | 52.17 |
| Bra020281.1-P | Field mustard | extracellular | 45.92 | 51.72 |
| PGSC0003DMT400066182 | Potato | extracellular | 46.94 | 51.69 |
| Solyc01g107370.2.1 | Tomato | extracellular | 46.94 | 51.69 |
| CDY72009 | Canola | extracellular | 45.92 | 51.14 |
| CDX80222 | Canola | extracellular | 47.96 | 51.09 |
| CDY31590 | Canola | extracellular | 47.96 | 51.09 |
| CDY09248 | Canola | extracellular | 45.92 | 50.56 |
| AT1G10588.1 | Thale cress | extracellular | 45.92 | 50.0 |
| CDX93402 | Canola | endoplasmic reticulum, extracellular | 45.92 | 47.87 |
| CDY50148 | Canola | extracellular | 44.9 | 45.83 |
| CDY22975 | Canola | extracellular | 43.88 | 44.33 |
| TraesCS7D01G210500.1 | Wheat | extracellular | 41.84 | 43.62 |
| VIT_07s0129g00580.t01 | Wine grape | extracellular | 56.12 | 43.31 |
| AT2G14900.1 | Thale cress | extracellular | 46.94 | 42.59 |
| Bra013115.1-P | Field mustard | extracellular | 45.92 | 42.45 |
| CDX93153 | Canola | extracellular | 45.92 | 42.45 |
| CDX89647 | Canola | extracellular | 45.92 | 42.45 |
| Bra039830.1-P | Field mustard | extracellular | 44.9 | 41.12 |
| CDY54472 | Canola | extracellular | 44.9 | 40.37 |
| CDY52417 | Canola | extracellular | 43.88 | 39.81 |
| TraesCS1D01G389400.1 | Wheat | extracellular | 41.84 | 39.81 |
| TraesCS5D01G234400.1 | Wheat | extracellular | 39.8 | 35.14 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G408100.1 | EnsemblPlantsGene:TraesCS5D01G408100 | InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF10 | PFAM:PF02704 |
| SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:11.10.2.1.1 | : | : |
Description
No Description!
Coordinates
chr5D:-:472768198..472768936
Molecular Weight (calculated)
10386.7 Da
IEP (calculated)
8.564
GRAVY (calculated)
-0.042
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MKKLHTTTAT TTLALLLLLV LLAATSLRVA MAGSAFCDSK CGVRCSKASR HDDCLKYCGI CCAECNCVPS GTAGNKDECP CYRDKTTGHG ARTRPKCP
001: MKIIVSILVL ASLLLISSSL ASATISDAFG SGAVAPAPQS KDGPALEKWC GQKCEGRCKE AGMKDRCLKY CGICCKDCQC VPSGTYGNKH ECACYRDKLS
101: SKGTPKCP
101: SKGTPKCP
Arabidopsis Description
GASA7Gibberellin-regulated protein 7 [Source:UniProtKB/Swiss-Prot;Acc:O82328]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.