CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20958	Canola	extracellular	100.0	100.0
CDY72009	Canola	extracellular	84.09	84.09
AT2G39540.1	Thale cress	extracellular	82.95	83.91
CDX93402	Canola	endoplasmic reticulum, extracellular	82.95	77.66
AT1G10588.1	Thale cress	extracellular	78.41	76.67
CDX88727	Canola	extracellular	77.27	74.73
CDY31591	Canola	extracellular	77.27	73.91
CDX80223	Canola	extracellular	76.14	72.83
CDX71072	Canola	extracellular	75.0	72.53
CDY09248	Canola	extracellular	71.59	70.79
CDX80222	Canola	extracellular	73.86	70.65
CDY31590	Canola	extracellular	73.86	70.65
GSMUA_Achr6P07810_001	Banana	cytosol	35.23	65.96
VIT_03s0091g00390.t01	Wine grape	extracellular	56.82	56.82
KRH35705	Soybean	extracellular	57.95	56.67
KRG91068	Soybean	extracellular	57.95	56.67
TraesCS5A01G398500.1	Wheat	extracellular	60.23	56.38
TraesCS5B01G403500.1	Wheat	extracellular	60.23	56.38
GSMUA_Achr6P02260_001	Banana	extracellular	57.95	56.04
Os03t0760800-01	Rice	extracellular	59.09	55.91
TraesCS5D01G408000.1	Wheat	extracellular	59.09	55.32
GSMUA_Achr10P...	Banana	extracellular	56.82	54.95
GSMUA_Achr5P16080_001	Banana	extracellular	47.73	53.85
EER90847	Sorghum	extracellular	56.82	53.76
GSMUA_Achr6P11160_001	Banana	extracellular	54.55	52.75
CDY14668	Canola	cytosol	44.32	52.7
GSMUA_Achr10P...	Banana	extracellular	54.55	52.17
TraesCS5A01G398600.1	Wheat	endoplasmic reticulum, extracellular	56.82	52.08
Zm00001d013222_P001	Maize	extracellular	56.82	52.08
TraesCS5B01G403600.1	Wheat	endoplasmic reticulum, extracellular	56.82	51.02
TraesCS5D01G408100.1	Wheat	endoplasmic reticulum, extracellular	55.68	50.0
TraesCS5A01G398700.1	Wheat	endoplasmic reticulum, extracellular	52.27	46.94
CDX89647	Canola	extracellular	53.41	44.34
CDX93153	Canola	extracellular	53.41	44.34
CDY54472	Canola	extracellular	54.55	44.04
CDY52417	Canola	extracellular	53.41	43.52
CDY50148	Canola	extracellular	46.59	42.71
CDY46336	Canola	extracellular	50.0	42.31
CDY18069	Canola	extracellular	50.0	42.31
CDY22975	Canola	extracellular	45.45	41.24
CDY71845	Canola	extracellular	45.45	39.6
CDY27104	Canola	extracellular	45.45	38.1
CDY60168	Canola	extracellular	45.45	33.33
CDY41324	Canola	cytosol	42.05	33.33
CDX91001	Canola	extracellular	38.64	32.08
CDX85557	Canola	extracellular	38.64	32.08
CDX70601	Canola	extracellular	38.64	32.08
CDY00909	Canola	extracellular	43.18	31.93
CDY22221	Canola	extracellular	45.45	31.25
CDX78620	Canola	cytosol	38.64	24.29

Protein Annotations

EnsemblPlants:CDY20617	EnsemblPlantsGene:GSBRNA2T00012792001	InterPro:GASA	PANTHER:PTHR23201	PANTHER:PTHR23201:SF10	PFAM:PF02704
ProteinID:CDY20617	ProteinID:CDY20617.1	ProteinID:CDY20958.1	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EAF74A
UniProt:A0A078G6M2	MapMan:11.10.2.1.1	:	:	:	:

Description

BnaC08g14410DBnaA08g25670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G6M2]

Coordinates

chrLK032110:-:267123..267722

Molecular Weight (calculated)

9653.7 Da

IEP (calculated)

8.105

GRAVY (calculated)

-0.139

Length

88 amino acids

Sequence
(BLAST)

1: MKLMVVQFCI IFFLLTSSFF VPSTADSSCG GKCNVRCSKA SQHEECLKYC NICCEKCNGC VPSGTYGNKD ECPCYRDIKN SKGGPKCP

Best Arabidopsis Sequence Match ( AT2G39540.1 )
(BLAST)

1: MKLVVVQFFI ISLLLTSSFS VLSSADSSCG GKCNVRCSKA GQHEECLKYC NICCQKCNCV PSGTFGHKDE CPCYRDMKNS KGGSKCP

Arabidopsis Description

Gibberellin-regulated protein 8 [Source:UniProtKB/Swiss-Prot;Acc:O80641]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.