Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G408000.1 | Wheat | extracellular | 96.81 | 96.81 |
| TraesCS5A01G398500.1 | Wheat | extracellular | 94.68 | 94.68 |
| TraesCS5A01G398600.1 | Wheat | endoplasmic reticulum, extracellular | 93.62 | 91.67 |
| EER90847 | Sorghum | extracellular | 84.04 | 84.95 |
| Os03t0760800-01 | Rice | extracellular | 84.04 | 84.95 |
| TraesCS5B01G403600.1 | Wheat | endoplasmic reticulum, extracellular | 88.3 | 84.69 |
| Zm00001d013222_P001 | Maize | extracellular | 79.79 | 78.12 |
| Solyc04g078200.2.1 | Tomato | extracellular | 50.0 | 72.31 |
| GSMUA_Achr6P11160_001 | Banana | extracellular | 65.96 | 68.13 |
| Solyc12g042500.1.1 | Tomato | extracellular | 62.77 | 67.05 |
| GSMUA_Achr6P02260_001 | Banana | extracellular | 64.89 | 67.03 |
| GSMUA_Achr10P... | Banana | extracellular | 63.83 | 65.93 |
| PGSC0003DMT400037423 | Potato | extracellular | 61.7 | 65.91 |
| Bra019917.1-P | Field mustard | cytosol | 44.68 | 63.64 |
| Solyc12g042520.1.1 | Tomato | extracellular | 59.57 | 63.64 |
| VIT_18s0001g09460.t01 | Wine grape | extracellular | 59.57 | 63.64 |
| PGSC0003DMT400055426 | Potato | extracellular | 57.45 | 61.36 |
| KRH52061 | Soybean | extracellular | 57.45 | 61.36 |
| GSMUA_Achr10P... | Banana | extracellular | 59.57 | 60.87 |
| CDY20958 | Canola | extracellular | 56.38 | 60.23 |
| CDY20617 | Canola | extracellular | 56.38 | 60.23 |
| KRH35705 | Soybean | extracellular | 56.38 | 58.89 |
| KRG91068 | Soybean | extracellular | 56.38 | 58.89 |
| AT2G39540.1 | Thale cress | extracellular | 54.26 | 58.62 |
| VIT_03s0091g00390.t01 | Wine grape | extracellular | 54.26 | 57.95 |
| KRH05612 | Soybean | extracellular | 54.26 | 57.95 |
| PGSC0003DMT400047535 | Potato | extracellular | 54.26 | 57.3 |
| AT5G59845.1 | Thale cress | extracellular | 54.26 | 57.3 |
| CDX71072 | Canola | extracellular | 55.32 | 57.14 |
| CDX88727 | Canola | extracellular | 55.32 | 57.14 |
| KRH15429 | Soybean | extracellular | 53.19 | 56.82 |
| CDY72009 | Canola | extracellular | 53.19 | 56.82 |
| Bra002526.1-P | Field mustard | extracellular | 55.32 | 56.52 |
| CDX80223 | Canola | extracellular | 55.32 | 56.52 |
| CDY31591 | Canola | extracellular | 55.32 | 56.52 |
| Bra020281.1-P | Field mustard | extracellular | 52.13 | 56.32 |
| Solyc08g005620.2.1 | Tomato | extracellular | 53.19 | 56.18 |
| Bra002525.1-P | Field mustard | extracellular | 54.26 | 55.43 |
| CDX80222 | Canola | extracellular | 54.26 | 55.43 |
| CDY31590 | Canola | extracellular | 54.26 | 55.43 |
| CDY09248 | Canola | extracellular | 52.13 | 55.06 |
| AT1G10588.1 | Thale cress | extracellular | 52.13 | 54.44 |
| PGSC0003DMT400066182 | Potato | extracellular | 51.06 | 53.93 |
| Solyc01g107370.2.1 | Tomato | extracellular | 51.06 | 53.93 |
| CDX93402 | Canola | endoplasmic reticulum, extracellular | 52.13 | 52.13 |
| CDX89647 | Canola | extracellular | 53.19 | 47.17 |
| CDX93153 | Canola | extracellular | 53.19 | 47.17 |
| Bra013115.1-P | Field mustard | extracellular | 53.19 | 47.17 |
| AT2G14900.1 | Thale cress | extracellular | 52.13 | 45.37 |
| Bra039830.1-P | Field mustard | extracellular | 51.06 | 44.86 |
| CDY50148 | Canola | extracellular | 45.74 | 44.79 |
| CDY22975 | Canola | extracellular | 45.74 | 44.33 |
| CDY54472 | Canola | extracellular | 51.06 | 44.04 |
| CDY52417 | Canola | extracellular | 50.0 | 43.52 |
| VIT_07s0129g00580.t01 | Wine grape | extracellular | 58.51 | 43.31 |
| TraesCS7B01G115300.1 | Wheat | extracellular | 41.49 | 39.39 |
| TraesCS1B01G404100.1 | Wheat | extracellular | 42.55 | 38.84 |
| TraesCS5B01G225600.1 | Wheat | extracellular | 37.23 | 31.25 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G403500.1 | EnsemblPlantsGene:TraesCS5B01G403500 | InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF10 | PFAM:PF02704 |
| SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:11.10.2.1.1 | : | : |
Description
No Description!
Coordinates
chr5B:-:580115344..580115739
Molecular Weight (calculated)
9924.1 Da
IEP (calculated)
8.693
GRAVY (calculated)
-0.122
Length
94 amino acids
Sequence
(BLAST)
(BLAST)
1: MKLRPTAATV ALLLFLLLAS SSLRAAMAGS AFCDGKCGVR CSKASRHDDC LKYCGICCAE CNCVPSGTAG NKDECPCYRD KTTGQGARKR PKCP
1: MKLVVVQFFI ISLLLTSSFS VLSSADSSCG GKCNVRCSKA GQHEECLKYC NICCQKCNCV PSGTFGHKDE CPCYRDMKNS KGGSKCP
Arabidopsis Description
Gibberellin-regulated protein 8 [Source:UniProtKB/Swiss-Prot;Acc:O80641]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.