Factsheet for Bra023884.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

plastid 1
peroxisome 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37294	Canola	cytosol, nucleus, peroxisome	99.45	99.45
Bra031281.1-P	Field mustard	cytosol	93.11	93.11
AT3G21420.1	Thale cress	cytosol	91.18	90.93
Solyc01g067620.2.1	Tomato	nucleus	69.7	69.7
PGSC0003DMT400027666	Potato	cytosol, nucleus, peroxisome	69.42	69.42
VIT_05s0020g01310.t01	Wine grape	cytosol	68.32	67.95
KRH37129	Soybean	cytosol	66.94	66.58
KRH12130	Soybean	cytosol	66.39	66.03
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	62.53	64.31
GSMUA_Achr11P...	Banana	cytosol	55.92	61.33
KRH02234	Soybean	cytosol	60.61	61.11
TraesCS3D01G450500.1	Wheat	cytosol	57.58	56.64
TraesCS3B01G497900.1	Wheat	cytosol	57.85	56.6
Zm00001d042192_P001	Maize	extracellular	57.02	56.56
EES04177	Sorghum	cytosol	56.75	55.68
TraesCS3A01G457700.1	Wheat	cytosol	56.75	55.68
Os01t0935400-00	Rice	cytosol	55.92	55.46
HORVU3Hr1G098580.2	Barley	plastid	57.58	45.63
Bra026693.1-P	Field mustard	cytosol	41.32	41.9
Bra010470.1-P	Field mustard	cytosol	30.3	41.2
Bra002299.1-P	Field mustard	cytosol	17.08	40.52
Bra026695.1-P	Field mustard	cytosol, nucleus, peroxisome	37.47	40.0
Bra010472.1-P	Field mustard	cytosol	39.12	39.66
Bra019177.1-P	Field mustard	cytosol	38.29	39.27
Bra022690.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	24.24	39.11
Bra026008.1-P	Field mustard	cytosol, nucleus, peroxisome	36.91	38.84
Bra010469.1-P	Field mustard	cytosol	37.19	38.57
Bra035046.1-P	Field mustard	cytosol	38.02	38.55
Bra006559.1-P	Field mustard	cytosol	36.36	37.71
Bra002298.1-P	Field mustard	cytosol	34.99	36.49
Bra013884.1-P	Field mustard	cytosol	36.91	30.52

Protein Annotations

MapMan:11.9.1.5	Gene3D:2.60.120.330	EnsemblPlantsGene:Bra023884	EnsemblPlants:Bra023884.1	EnsemblPlants:Bra023884.1-P	InterPro:DIOX_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M4E530
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF169
SUPFAM:SSF51197	UniParc:UPI0002544548	:	:	:	:

Description

AT3G21420 (E=6e-193) | oxidoreductase, 2OG-Fe(II) oxygenase family protein

Coordinates

chrA01:-:20767015..20768761

Molecular Weight (calculated)

41195.5 Da

IEP (calculated)

6.253

GRAVY (calculated)

-0.360

Length

363 amino acids

Sequence
(BLAST)

001: MAPLPISSIR VGKIEDVQEL IKSKPNKVPE RFIRDANERG GLVSLKTHLH QPIPVIDLSK LSKPHTNDDF VFEILKLSQA CEDWGFFQVI NHGLEVDVVD
101: DIEKVAKEFF EMPLEEKQKY PMEPGTVQGY GQAFIFSEDQ KLDWCNMFAL GVHPPSIRNP KLWPSKPARF SESLKGYSKE ISKLCKRLLT YIAISLGLKK
201: ETFEEMFGEA VQAVRMNYYP PCSSPDLVLG LSPHSDGSAL TVLQQSKDSC VGLQILKDNT WVPVLPLPNA LVINIGDTVE VLTNGKYKSV EHRAVTNRER
301: ERLTIVTFYA PNYEVEIEPM GELVDDETNP CKYRSYNHGD YSYHYISNKL QGKKSLDFAK ILN

Best Arabidopsis Sequence Match ( AT3G21420.1 )
(BLAST)

001: MAPLPISSIR VGKIDDVQEL IKSKPNKVPE RFIREEYERG VVVSSLKTHH LHHQIPVIDL SKLSKPDNDD FFFEILKLSQ ACEDWGFFQV INHGIEVEVV
101: EDIEEVASEF FDMPLEEKKK YPMEPGTVQG YGQAFIFSED QKLDWCNMFA LGVHPPQIRN PKLWPSKPAR FSESLEGYSK EIRELCKRLL KYIAISLGLK
201: EERFEEMFGE AVQAVRMNYY PPCSSPDLVL GLSPHSDGSA LTVLQQSKNS CVGLQILKDN TWVPVKPLPN ALVINIGDTI EVLSNGKYKS VEHRAVTNRE
301: KERLTIVTFY APNYEVEIEP MSELVDDETN PCKYRSYNHG DYSYHYVSNK LQGKKSLDFA KILN

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LIF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.