Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031281.1-P | Field mustard | cytosol | 92.58 | 92.84 |
| CDY38615 | Canola | cytosol | 92.58 | 92.84 |
| CDY44337 | Canola | cytosol | 92.03 | 92.29 |
| Bra023884.1-P | Field mustard | cytosol, nucleus, peroxisome | 90.93 | 91.18 |
| CDY19267 | Canola | cytosol | 90.66 | 90.91 |
| CDY37294 | Canola | cytosol, nucleus, peroxisome | 90.38 | 90.63 |
| Solyc01g067620.2.1 | Tomato | nucleus | 69.78 | 69.97 |
| PGSC0003DMT400027666 | Potato | cytosol, nucleus, peroxisome | 69.78 | 69.97 |
| VIT_05s0020g01310.t01 | Wine grape | cytosol | 69.23 | 69.04 |
| KRH37129 | Soybean | cytosol | 67.31 | 67.12 |
| KRH12130 | Soybean | cytosol | 66.76 | 66.58 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, peroxisome | 62.64 | 64.59 |
| GSMUA_Achr11P... | Banana | cytosol | 55.77 | 61.33 |
| KRH02234 | Soybean | cytosol | 60.16 | 60.83 |
| TraesCS3D01G450500.1 | Wheat | cytosol | 57.69 | 56.91 |
| TraesCS3B01G497900.1 | Wheat | cytosol | 57.97 | 56.87 |
| Os01t0935400-00 | Rice | cytosol | 57.14 | 56.83 |
| Zm00001d042192_P001 | Maize | extracellular | 57.14 | 56.83 |
| TraesCS3A01G457700.1 | Wheat | cytosol | 56.87 | 55.95 |
| EES04177 | Sorghum | cytosol | 56.32 | 55.41 |
| HORVU3Hr1G098580.2 | Barley | plastid | 57.69 | 45.85 |
| AT4G25310.1 | Thale cress | cytosol | 40.38 | 41.64 |
| AT1G17020.1 | Thale cress | cytosol | 40.66 | 41.34 |
| AT1G17010.1 | Thale cress | cytosol | 40.11 | 40.44 |
| AT4G25300.1 | Thale cress | cytosol | 39.29 | 40.17 |
| AT1G78550.1 | Thale cress | cytosol, nucleus, peroxisome | 39.01 | 39.89 |
| AT5G20400.1 | Thale cress | cytosol | 35.16 | 36.78 |
| AT1G49390.1 | Thale cress | cytosol | 35.16 | 36.78 |
| AT5G54000.2 | Thale cress | cytosol | 34.34 | 35.82 |
| AT5G20550.1 | Thale cress | cytosol | 34.34 | 35.82 |
Protein Annotations
| MapMan:11.9.1.5 | Gene3D:2.60.120.330 | EntrezGene:821696 | ProteinID:AEE76507.1 | EMBL:AK227427 | ArrayExpress:AT3G21420 |
| EnsemblPlantsGene:AT3G21420 | RefSeq:AT3G21420 | TAIR:AT3G21420 | RefSeq:AT3G21420-TAIR-G | EnsemblPlants:AT3G21420.1 | TAIR:AT3G21420.1 |
| EMBL:AY084795 | Unigene:At.38063 | ProteinID:BAB03055.1 | EMBL:BT005988 | InterPro:DIOX_N | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | GO:GO:1901601 | InterPro:IPNS-like |
| InterPro:IPR005123 | InterPro:IPR027443 | RefSeq:NP_566685.1 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF169 | UniProt:Q9LIF4 | SUPFAM:SSF51197 |
| UniParc:UPI000004874C | SEG:seg | : | : | : | : |
Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LIF4]
Coordinates
chr3:+:7541384..7543560
Molecular Weight (calculated)
41690.8 Da
IEP (calculated)
5.484
GRAVY (calculated)
-0.416
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPLPISSIR VGKIDDVQEL IKSKPNKVPE RFIREEYERG VVVSSLKTHH LHHQIPVIDL SKLSKPDNDD FFFEILKLSQ ACEDWGFFQV INHGIEVEVV
101: EDIEEVASEF FDMPLEEKKK YPMEPGTVQG YGQAFIFSED QKLDWCNMFA LGVHPPQIRN PKLWPSKPAR FSESLEGYSK EIRELCKRLL KYIAISLGLK
201: EERFEEMFGE AVQAVRMNYY PPCSSPDLVL GLSPHSDGSA LTVLQQSKNS CVGLQILKDN TWVPVKPLPN ALVINIGDTI EVLSNGKYKS VEHRAVTNRE
301: KERLTIVTFY APNYEVEIEP MSELVDDETN PCKYRSYNHG DYSYHYVSNK LQGKKSLDFA KILN
101: EDIEEVASEF FDMPLEEKKK YPMEPGTVQG YGQAFIFSED QKLDWCNMFA LGVHPPQIRN PKLWPSKPAR FSESLEGYSK EIRELCKRLL KYIAISLGLK
201: EERFEEMFGE AVQAVRMNYY PPCSSPDLVL GLSPHSDGSA LTVLQQSKNS CVGLQILKDN TWVPVKPLPN ALVINIGDTI EVLSNGKYKS VEHRAVTNRE
301: KERLTIVTFY APNYEVEIEP MSELVDDETN PCKYRSYNHG DYSYHYVSNK LQGKKSLDFA KILN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.