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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • peroxisome 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, peroxisome, plastid
BaCelLo:cytosol
MultiLoc:peroxisome
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT4G25310.1 Thale cress cytosol 85.11 85.84
CDY52350 Canola cytosol 60.67 80.9
CDY08973 Canola cytosol 59.83 79.78
Bra010470.1-P Field mustard cytosol 59.55 79.4
CDY24860 Canola cytosol 59.55 79.4
CDY08970 Canola cytosol 79.78 79.33
Bra010472.1-P Field mustard cytosol 78.37 77.93
CDY24858 Canola cytosol, peroxisome, plastid 78.37 77.93
Bra010469.1-P Field mustard cytosol 76.4 77.71
CDX94459 Canola cytosol 53.37 76.92
CDY11068 Canola cytosol 76.4 76.84
Bra019177.1-P Field mustard cytosol 76.12 76.55
CDX89424 Canola cytosol 61.8 75.86
CDX92691 Canola cytosol 30.9 75.34
AT1G17020.1 Thale cress cytosol 75.28 74.86
CDX92689 Canola cytosol 74.44 73.82
AT1G17010.1 Thale cress cytosol 72.75 71.75
AT1G78550.1 Thale cress cytosol, nucleus, peroxisome 64.89 64.89
CDX89425 Canola cytosol, peroxisome, plastid 33.99 59.02
KRH21858 Soybean cytosol 57.87 57.7
VIT_15s0021g00950.t01 Wine grape cytosol 55.34 56.61
VIT_15s0021g00960.t01 Wine grape cytosol 57.58 56.32
KRH13456 Soybean cytosol 55.62 56.09
KRH27439 Soybean cytosol 56.18 55.71
KRH27437 Soybean cytosol 55.9 55.59
VIT_10s0003g02450.t01 Wine grape cytosol 57.02 55.46
VIT_10s0003g02470.t01 Wine grape cytosol, mitochondrion, peroxisome, plastid 33.15 55.14
Bra013884.1-P Field mustard cytosol 64.61 52.39
GSMUA_AchrUn_... Banana cytosol, peroxisome 37.92 47.54
GSMUA_AchrUn_... Banana cytosol, peroxisome 28.09 46.73
Os01t0351800-01 Rice cytosol 44.66 46.22
TraesCS4B01G374200.1 Wheat cytosol 44.94 45.98
TraesCS4D01G363200.1 Wheat cytosol 44.94 45.98
TraesCS5A01G539800.1 Wheat cytosol 44.94 45.98
TraesCS4B01G374300.1 Wheat cytosol 44.94 45.85
TraesCS4D01G363000.1 Wheat cytosol 46.07 45.81
GSMUA_Achr5P20940_001 Banana cytosol 46.07 45.68
TraesCS4D01G363100.1 Wheat cytosol 44.66 45.56
GSMUA_Achr11P... Banana cytosol 32.87 45.53
TraesCS3D01G013500.1 Wheat mitochondrion 21.35 44.97
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 44.38 44.63
TraesCS5A01G539700.2 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole 42.98 44.48
TraesCS3B01G440500.1 Wheat cytosol 46.07 44.44
TraesCS5A01G539900.1 Wheat cytosol 39.04 43.71
TraesCS1A01G221200.1 Wheat cytosol 43.26 43.5
TraesCS3A01G407800.1 Wheat cytosol 44.94 43.36
TraesCS3D01G403000.1 Wheat cytosol 44.94 43.36
GSMUA_Achr11P... Banana plastid 41.85 43.31
TraesCS3D01G529900.1 Wheat cytosol 42.7 43.3
TraesCS1D01G222800.1 Wheat cytosol 42.98 43.22
Zm00001d048547_P001 Maize cytosol, peroxisome, plastid 43.26 43.14
TraesCS4D01G363300.1 Wheat cytosol 41.29 43.11
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 42.98 43.1
HORVU3Hr1G091210.2 Barley cytosol 44.94 43.01
HORVU4Hr1G088340.42 Barley cytosol 44.94 43.01
TraesCS3A01G407900.1 Wheat cytosol 44.38 42.93
GSMUA_Achr11P... Banana cytosol 42.7 42.7
GSMUA_Achr11P... Banana cytosol 42.42 42.54
TraesCS3A01G524700.1 Wheat cytosol 41.85 42.45
TraesCS1B01G234500.1 Wheat plastid 31.46 42.42
Os01t0352100-01 Rice cytosol 41.57 42.29
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 42.13 42.25
HORVU2Hr1G010950.3 Barley cytoskeleton, cytosol, peroxisome 42.7 42.11
TraesCS2D01G063800.1 Wheat cytoskeleton, cytosol, peroxisome 43.26 42.08
HORVU1Hr1G056210.5 Barley cytosol 41.85 41.97
EER91934 Sorghum cytosol 42.13 41.78
Os10t0558900-01 Rice cytosol 32.58 41.73
EER95699 Sorghum cytosol 41.57 41.69
TraesCS3B01G592000.1 Wheat cytosol 44.38 41.69
Zm00001d029218_P001 Maize cytosol, peroxisome, plastid 35.96 41.56
KXG37090 Sorghum cytosol 42.13 41.44
Zm00001d040597_P001 Maize cytosol 41.29 41.29
TraesCS2B01G077800.1 Wheat cytosol 42.42 41.26
KXG37089 Sorghum cytosol 41.57 41.23
Os10t0558750-01 Rice cytosol, nucleus, peroxisome 32.3 41.22
TraesCS2D01G063700.1 Wheat cytoskeleton, cytosol, peroxisome 42.13 41.21
Zm00001d012819_P001 Maize cytosol 42.13 41.21
EER91935 Sorghum cytosol 41.57 41.11
EES15940 Sorghum cytosol 41.29 41.06
EES08209 Sorghum cytosol 42.13 40.98
Os10t0558200-00 Rice cytosol 40.17 40.86
Os10t0559500-01 Rice cytosol 41.29 40.83
TraesCSU01G044600.1 Wheat mitochondrion 23.6 40.78
TraesCS2B01G077500.1 Wheat cytoskeleton, cytosol, peroxisome 41.57 40.77
HORVU2Hr1G010930.2 Barley cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 41.29 40.72
TraesCS2A01G065800.1 Wheat cytosol 41.85 40.71
TraesCS2D01G064100.1 Wheat cytosol 41.85 40.71
KXG34760 Sorghum cytosol 41.01 40.67
TraesCS2A01G065600.1 Wheat cytoskeleton, cytosol, peroxisome 41.57 40.44
TraesCSU01G175100.1 Wheat cytosol 36.52 40.12
Zm00001d041086_P001 Maize cytosol 40.17 40.06
Os03t0856000-01 Rice cytosol 40.73 40.06
TraesCS2A01G065500.1 Wheat cytosol 41.29 40.05
TraesCS2D01G064000.1 Wheat cytosol 30.34 39.85
TraesCS2D01G063600.1 Wheat cytosol 41.01 39.78
HORVU2Hr1G010960.1 Barley cytosol, mitochondrion, peroxisome 39.89 39.66
Os10t0558700-02 Rice cytosol, nucleus, peroxisome 39.61 39.5
AT3G21420.1 Thale cress cytosol 40.17 39.29
TraesCS2D01G063400.1 Wheat cytosol 40.17 38.86
HORVU4Hr1G080610.2 Barley cytosol 39.61 38.84
KXG32356 Sorghum plastid 37.64 38.62
TraesCS2A01G065300.1 Wheat cytosol 39.89 38.59
TraesCS2B01G077600.1 Wheat cytosol 39.89 38.59
TraesCS4B01G335300.2 Wheat cytosol 39.33 38.57
EES02838 Sorghum cytosol 38.2 38.53
TraesCS2A01G065400.1 Wheat cytosol 39.33 38.04
TraesCS2D01G063500.1 Wheat cytosol 39.33 38.04
EES02842 Sorghum cytosol 40.73 37.66
TraesCS3A01G477000.2 Wheat cytosol 37.08 37.5
TraesCS3D01G471500.2 Wheat cytosol 37.08 37.5
OQU92563 Sorghum cytosol 38.76 37.1
TraesCS4B01G374100.2 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 41.57 36.82
Os10t0558400-00 Rice cytosol, peroxisome 41.01 36.78
Os09t0354100-00 Rice cytosol, peroxisome 29.49 36.59
Os03t0439500-01 Rice cytosol 37.64 36.02
TraesCS4D01G330600.1 Wheat cytosol 36.8 35.99
EES12050 Sorghum cytosol 35.67 35.88
OQU92296 Sorghum cytosol 35.96 35.65
TraesCS1A01G331300.1 Wheat cytosol 35.11 35.41
TraesCS5D01G468100.1 Wheat cytosol 34.55 34.75
AT5G20400.1 Thale cress cytosol 33.71 34.48
TraesCS5B01G466400.1 Wheat cytosol 34.27 34.46
TraesCS1B01G345200.1 Wheat cytosol 34.83 34.44
Zm00001d029636_P001 Maize extracellular 34.83 34.44
TraesCS5A01G457300.1 Wheat cytosol 33.43 34.29
AT1G49390.1 Thale cress cytosol 33.43 34.2
TraesCS3B01G520100.3 Wheat cytosol 37.08 34.02
KXG39676 Sorghum cytosol, endoplasmic reticulum, peroxisome 37.08 33.0
AT5G20550.1 Thale cress cytosol 32.3 32.95
TraesCS1A01G331400.1 Wheat cytosol, peroxisome, plastid 35.39 32.47
AT5G54000.2 Thale cress cytosol 31.74 32.38
OQU92565 Sorghum mitochondrion, plastid 25.0 32.01
HORVU3Hr1G104290.2 Barley plastid 37.36 31.22
KXG19500 Sorghum cytosol, endoplasmic reticulum, peroxisome 38.2 30.49
HORVU1Hr1G077370.1 Barley plastid 35.39 29.86
TraesCS1D01G333300.1 Wheat cytosol 26.69 28.96
Os09t0353700-00 Rice cytosol, peroxisome, plastid 31.74 27.83
Zm00001d041087_P001 Maize cytosol 35.96 26.78
GSMUA_AchrUn_... Banana mitochondrion 36.8 21.23
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13EntrezGene:828633ProteinID:AEE85036.1ArrayExpress:AT4G25300EnsemblPlantsGene:AT4G25300
RefSeq:AT4G25300TAIR:AT4G25300RefSeq:AT4G25300-TAIR-GEnsemblPlants:AT4G25300.1TAIR:AT4G25300.1Unigene:At.27751
ProteinID:CAA23071.1ProteinID:CAB81341.1InterPro:DIOX_NGO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114InterPro:IPNS-like
InterPro:IPR005123InterPro:IPR027443RefSeq:NP_194260.1InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226
PO:PO:0000293PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF168UniProt:Q9SB33SUPFAM:SSF51197
UniParc:UPI00000489E5SEG:seg::::
Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SB33]
Coordinates
chr4:+:12945120..12946778
Molecular Weight (calculated)
40411.0 Da
IEP (calculated)
5.761
GRAVY (calculated)
-0.230
Length
356 amino acids
Sequence
(BLAST)
001: MEVKGATRSS IIVPSVQEMV KEKMITTVPP RYVRSDQDVA EIAVDSGLRN QIPIIDMSLL CSSTSMDSEI DKLDSACKEW GFFQLVNHGM ESSFLNKVKS
101: EVQDFFNLPM EEKKNLWQQP DEIEGFGQVF VVSEEQKLDW ADMFFLTMQP VRLRKPHLFP KLPLPFRDTL DMYSAEVKSI AKILLGKIAV ALKIKPEEMD
201: KLFDDELGQR IRLNYYPRCP EPDKVIGLTP HSDSTGLTIL LQANEVEGLQ IKKNAKWVSV KPLPNALVVN VGDILEIITN GTYRSIEHRG VVNSEKERLS
301: VAAFHNIGLG KEIGPMRSLV ERHKAAFFKS VTTEEYFNGL FSRELDGKAY LDVMRL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.