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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • peroxisome 1
  • mitochondrion 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, peroxisome
MultiLoc:peroxisome
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G363300.1 Wheat cytosol 75.81 82.7
TraesCS5A01G539900.1 Wheat cytosol 69.35 81.13
TraesCS4B01G374100.2 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 80.65 74.63
Os01t0351800-01 Rice cytosol 63.44 68.6
EER95699 Sorghum cytosol 60.22 63.1
Zm00001d048547_P001 Maize cytosol, peroxisome, plastid 60.48 63.03
Os01t0352100-01 Rice cytosol 58.87 62.57
GSMUA_Achr11P... Banana plastid 53.23 57.56
VIT_02s0012g00440.t01 Wine grape extracellular 18.55 52.67
VIT_02s0012g00390.t01 Wine grape cytosol 46.51 49.01
VIT_02s0012g00450.t01 Wine grape cytosol, nucleus, peroxisome 46.24 48.73
VIT_02s0012g00320.t01 Wine grape cytosol 35.75 48.72
VIT_02s0012g00360.t01 Wine grape cytosol 43.55 48.21
VIT_02s0012g00400.t01 Wine grape cytosol, peroxisome, plastid 44.62 47.98
Bra010470.1-P Field mustard cytosol 33.6 46.82
Bra026693.1-P Field mustard cytosol 44.62 46.37
AT4G25310.1 Thale cress cytosol 43.82 46.18
KRH13456 Soybean cytosol 43.01 45.33
Bra026695.1-P Field mustard cytosol, nucleus, peroxisome 41.4 45.29
Bra035046.1-P Field mustard cytosol 43.55 45.25
AT4G25300.1 Thale cress cytosol 43.01 44.94
AT1G17010.1 Thale cress cytosol 43.55 44.88
HORVU3Hr1G091210.2 Barley cytosol 44.62 44.62
AT1G17020.1 Thale cress cytosol 42.74 44.41
AT1G78550.1 Thale cress cytosol, nucleus, peroxisome 42.47 44.38
Bra019177.1-P Field mustard cytosol 42.2 44.35
HORVU2Hr1G010960.1 Barley cytosol, mitochondrion, peroxisome 42.47 44.13
HORVU1Hr1G056210.5 Barley cytosol 41.94 43.94
VIT_02s0012g00350.t01 Wine grape cytosol 40.86 43.93
HORVU2Hr1G010950.3 Barley cytoskeleton, cytosol, peroxisome 42.47 43.77
Bra010469.1-P Field mustard cytosol 40.59 43.14
KRH71023 Soybean cytosol 41.4 43.02
PGSC0003DMT400018663 Potato cytosol 41.67 42.94
Solyc02g071490.2.1 Tomato cytosol 41.67 42.94
KRH27439 Soybean cytosol 41.4 42.9
KRH27437 Soybean cytosol 41.13 42.74
HORVU4Hr1G080610.2 Barley cytosol 41.67 42.7
PGSC0003DMT400007989 Potato cytosol 41.67 42.7
HORVU2Hr1G010930.2 Barley cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 41.4 42.66
KRH58590 Soybean cytosol 41.13 42.62
Bra026008.1-P Field mustard cytosol, nucleus, peroxisome 39.52 42.61
KRH75001 Soybean cytosol 40.05 42.57
KRH21858 Soybean cytosol 40.59 42.3
PGSC0003DMT400008001 Potato cytosol 40.59 42.18
Solyc02g071360.2.1 Tomato cytosol 41.13 42.15
KRH42495 Soybean cytosol 40.32 42.13
Solyc02g071500.2.1 Tomato cytosol 39.78 41.81
Solyc02g071380.2.1 Tomato cytosol, nucleus, peroxisome 40.32 41.78
PGSC0003DMT400007963 Potato cytosol 40.86 41.53
Solyc02g071430.2.1 Tomato cytosol 40.59 41.48
PGSC0003DMT400007992 Potato cytosol, nucleus, peroxisome 40.32 41.44
KRH71025 Soybean cytosol 39.25 41.01
PGSC0003DMT400018670 Potato cytosol 38.44 40.97
KRH43438 Soybean nucleus 29.57 40.74
PGSC0003DMT400007999 Potato cytosol 38.71 40.56
KRH75184 Soybean cytosol 27.15 40.56
Solyc02g071450.2.1 Tomato cytosol 39.25 40.56
Bra010472.1-P Field mustard cytosol 38.98 40.5
VIT_02s0012g00410.t01 Wine grape plastid 37.63 40.46
KRH71028 Soybean cytosol 39.52 40.38
PGSC0003DMT400018673 Potato cytosol 30.38 40.36
Solyc02g071440.2.1 Tomato cytosol 37.63 40.0
Solyc02g071470.2.1 Tomato cytosol 38.44 39.72
Solyc02g071410.2.1 Tomato cytosol 38.17 39.44
Solyc02g071400.2.1 Tomato cytosol 35.75 39.12
Solyc08g062370.2.1 Tomato cytoskeleton, cytosol, peroxisome 18.55 38.76
PGSC0003DMT400007990 Potato nucleus 22.31 38.43
VIT_02s0012g00380.t01 Wine grape cytosol 27.42 38.2
Solyc02g071480.2.1 Tomato cytosol, nucleus, peroxisome 34.95 38.01
PGSC0003DMT400055956 Potato cytosol 17.74 37.08
KRH11118 Soybean cytosol, nucleus, peroxisome, plastid 36.83 36.83
KRH49748 Soybean cytosol 36.02 36.61
KRG89247 Soybean cytosol, peroxisome, plastid 22.85 36.02
KRH21128 Soybean cytosol 26.61 36.0
KRH49750 Soybean cytosol 33.87 35.9
PGSC0003DMT400059406 Potato peroxisome 23.39 35.66
KRG89246 Soybean cytosol 34.41 35.46
KRH58593 Soybean cytosol, peroxisome, plastid 34.41 35.26
HORVU7Hr1G009320.1 Barley cytosol 24.46 33.58
HORVU3Hr1G104290.2 Barley plastid 37.9 33.1
HORVU7Hr1G028850.1 Barley cytosol 31.18 32.49
HORVU7Hr1G009310.3 Barley cytosol 30.11 32.28
HORVU3Hr1G098580.2 Barley plastid 38.98 31.66
Bra013884.1-P Field mustard cytosol 37.1 31.44
HORVU1Hr1G077370.1 Barley plastid 35.48 31.28
HORVU1Hr1G066370.1 Barley cytosol, peroxisome 27.69 31.12
HORVU7Hr1G028880.10 Barley plastid 32.26 30.93
HORVU7Hr1G009140.4 Barley cytosol, peroxisome 29.84 30.92
HORVU7Hr1G028870.3 Barley cytosol 29.57 30.81
HORVU7Hr1G028840.5 Barley cytosol 29.3 30.7
HORVU6Hr1G078640.9 Barley cytosol, peroxisome 27.69 30.56
HORVU7Hr1G010150.1 Barley cytosol, endoplasmic reticulum, peroxisome 28.76 30.06
HORVU7Hr1G028710.2 Barley cytosol 29.3 29.14
HORVU7Hr1G009200.1 Barley cytosol, peroxisome 14.52 28.88
HORVU6Hr1G088420.2 Barley cytosol, peroxisome 27.69 28.85
HORVU6Hr1G088440.1 Barley cytosol 27.42 28.65
HORVU6Hr1G088470.1 Barley cytosol 27.42 28.57
HORVU6Hr1G088540.1 Barley cytosol 27.42 28.57
HORVU5Hr1G075760.1 Barley cytosol 28.23 28.53
HORVU7Hr1G021490.3 Barley cytosol, peroxisome 24.19 28.48
HORVU0Hr1G019590.1 Barley peroxisome 19.09 28.29
HORVU5Hr1G065620.7 Barley plastid 26.88 27.25
HORVU5Hr1G124390.1 Barley cytosol 22.04 27.06
HORVU2Hr1G096500.1 Barley cytosol 12.63 22.93
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13UniProt:A0A287Q2E9InterPro:DIOX_NGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114
EnsemblPlantsGene:HORVU4Hr1G088340EnsemblPlants:HORVU4Hr1G088340.42InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171PFAM:PF14226PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF360SUPFAM:SSF51197
UniParc:UPI000B47C80B:::::
Description
No Description!
Coordinates
chrchr4H:-:640426461..640430497
Molecular Weight (calculated)
42382.8 Da
IEP (calculated)
5.977
GRAVY (calculated)
-0.385
Length
372 amino acids
Sequence
(BLAST)
001: MLYMCQKTRG RLKTEASQEK QQEMQSLTVP SVQAMVAATG RATVPPRYLR PAEVVAGDSE AQIPIIDYQR LLLELELDHC GEESARLHRA CQDWGFFQLI
101: NHSVPDDVVE GMKISIQQFF QLPMETKKQF ALERGQQEGY GQHFVFSEDQ KLDWADMLYL YTQPHESRNT KLWPDQPANF RSMLDRYSGA VKEITDTLLA
201: TMSENLGLKQ EVIADRCVGG VQSVRMNYYP PCAQADKVIG FSPHSDADLL TLVLQVNHVQ GLQIKRNGSW FPVKPVEGAL IVNIGDIFEI FTNGWYRSIE
301: HRAVVNPKEE RLSVAAFHSP NIHAMIGPLK EITAREGGEE EAYKTLDHEN FMRLFFATKL EGKSFLDRMK LN
Best Arabidopsis Sequence Match ( AT1G17010.1 )
(BLAST)
001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.