CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
peroxisome 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048547_P001	Maize	cytosol, peroxisome, plastid	88.17	87.68
TraesCS4B01G374200.1	Wheat	cytosol	64.51	65.8
TraesCS4D01G363200.1	Wheat	cytosol	64.51	65.8
TraesCS5A01G539800.1	Wheat	cytosol	64.51	65.8
TraesCS4D01G363300.1	Wheat	cytosol	61.13	63.64
TraesCS5A01G539900.1	Wheat	cytosol	56.9	63.52
TraesCS4B01G374300.1	Wheat	cytosol	62.25	63.32
TraesCS4D01G363100.1	Wheat	cytosol	61.97	63.04
TraesCS3D01G529900.1	Wheat	cytosol	61.69	62.39
TraesCS4D01G363000.1	Wheat	cytosol	62.25	61.73
TraesCS5A01G539700.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	59.44	61.34
Os01t0351800-01	Rice	cytosol	59.15	61.05
HORVU4Hr1G088340.42	Barley	cytosol	63.1	60.22
TraesCS3A01G524700.1	Wheat	cytosol	59.44	60.11
Os01t0352100-01	Rice	cytosol	57.46	58.29
TraesCS3B01G592000.1	Wheat	cytosol	61.41	57.52
GSMUA_Achr11P...	Banana	plastid	55.49	57.27
TraesCS4B01G374100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	62.25	54.98
VIT_02s0012g00440.t01	Wine grape	extracellular	18.59	50.38
VIT_02s0012g00390.t01	Wine grape	cytosol	48.45	48.73
VIT_02s0012g00450.t01	Wine grape	cytosol, nucleus, peroxisome	48.45	48.73
KXG37090	Sorghum	cytosol	49.3	48.34
VIT_02s0012g00320.t01	Wine grape	cytosol	36.62	47.62
VIT_02s0012g00400.t01	Wine grape	cytosol, peroxisome, plastid	45.63	46.82
KXG37089	Sorghum	cytosol	47.32	46.8
EES08209	Sorghum	cytosol	48.17	46.72
EER91935	Sorghum	cytosol	47.32	46.67
VIT_02s0012g00360.t01	Wine grape	cytosol	43.66	46.13
EES02838	Sorghum	cytosol	45.35	45.61
OQU92563	Sorghum	cytosol	46.76	44.62
KXG32356	Sorghum	plastid	42.82	43.8
EER91934	Sorghum	cytosol	44.23	43.73
Bra026693.1-P	Field mustard	cytosol	43.94	43.58
Bra026695.1-P	Field mustard	cytosol, nucleus, peroxisome	41.69	43.53
Bra010470.1-P	Field mustard	cytosol	32.68	43.45
VIT_02s0012g00350.t01	Wine grape	cytosol	42.25	43.35
Bra035046.1-P	Field mustard	cytosol	43.66	43.3
AT4G25310.1	Thale cress	cytosol	42.82	43.06
KRH75184	Soybean	cytosol	30.14	42.97
KRH13456	Soybean	cytosol	42.54	42.78
KRH21858	Soybean	cytosol	42.82	42.58
AT1G17020.1	Thale cress	cytosol	42.82	42.46
AT1G17010.1	Thale cress	cytosol	43.1	42.38
KRH71023	Soybean	cytosol	42.54	42.18
AT1G78550.1	Thale cress	cytosol, nucleus, peroxisome	41.97	41.85
Solyc02g071380.2.1	Tomato	cytosol, nucleus, peroxisome	42.25	41.78
PGSC0003DMT400007999	Potato	cytosol	41.69	41.69
PGSC0003DMT400007989	Potato	cytosol	42.54	41.6
AT4G25300.1	Thale cress	cytosol	41.69	41.57
Bra019177.1-P	Field mustard	cytosol	41.13	41.24
PGSC0003DMT400007992	Potato	cytosol, nucleus, peroxisome	41.97	41.16
Bra010469.1-P	Field mustard	cytosol	40.56	41.14
Solyc02g071360.2.1	Tomato	cytosol	41.97	41.05
PGSC0003DMT400007963	Potato	cytosol	42.25	40.98
KRH58590	Soybean	cytosol	41.41	40.95
Solyc02g071430.2.1	Tomato	cytosol	41.97	40.93
EES15940	Sorghum	cytosol	41.13	40.78
KRH27437	Soybean	cytosol	41.13	40.78
PGSC0003DMT400008001	Potato	cytosol	41.13	40.78
EES02842	Sorghum	cytosol	44.23	40.78
VIT_02s0012g00410.t01	Wine grape	plastid	39.72	40.75
KRH42495	Soybean	cytosol	40.85	40.73
Bra026008.1-P	Field mustard	cytosol, nucleus, peroxisome	39.44	40.58
PGSC0003DMT400018663	Potato	cytosol	41.13	40.44
Solyc02g071490.2.1	Tomato	cytosol	41.13	40.44
KRH75001	Soybean	cytosol	39.72	40.29
KRH27439	Soybean	cytosol	40.28	39.83
Bra010472.1-P	Field mustard	cytosol	40.0	39.66
KRH71025	Soybean	cytosol	39.72	39.61
Solyc02g071450.2.1	Tomato	cytosol	40.0	39.44
KXG34760	Sorghum	cytosol	39.72	39.28
Solyc02g071500.2.1	Tomato	cytosol	39.15	39.27
PGSC0003DMT400018670	Potato	cytosol	38.31	38.97
VIT_02s0012g00380.t01	Wine grape	cytosol	29.3	38.95
Solyc08g062370.2.1	Tomato	cytoskeleton, cytosol, peroxisome	19.44	38.76
KRH71028	Soybean	cytosol	39.72	38.74
Solyc02g071470.2.1	Tomato	cytosol	39.15	38.61
PGSC0003DMT400018673	Potato	cytosol	30.42	38.57
Solyc02g071440.2.1	Tomato	cytosol	38.03	38.57
Solyc02g071400.2.1	Tomato	cytosol	36.62	38.24
Solyc02g071410.2.1	Tomato	cytosol	38.59	38.06
PGSC0003DMT400007990	Potato	nucleus	23.1	37.96
Solyc02g071480.2.1	Tomato	cytosol, nucleus, peroxisome	35.77	37.13
PGSC0003DMT400055956	Potato	cytosol	18.59	37.08
KRH43438	Soybean	nucleus	28.17	37.04
EES04177	Sorghum	cytosol	38.03	36.49
PGSC0003DMT400059406	Potato	peroxisome	24.51	35.66
OQU92296	Sorghum	cytosol	36.06	35.65
EES12050	Sorghum	cytosol	35.49	35.59
KXG29110	Sorghum	cytosol	36.34	35.44
OQU75951	Sorghum	cytosol	34.37	35.26
EER89306	Sorghum	cytosol	35.21	34.82
KRH11118	Soybean	cytosol, nucleus, peroxisome, plastid	36.06	34.41
KRG89247	Soybean	cytosol, peroxisome, plastid	22.82	34.32
KRH58593	Soybean	cytosol, peroxisome, plastid	34.93	34.16
KRH49748	Soybean	cytosol	35.21	34.15
EER88660	Sorghum	cytosol	35.21	34.06
KXG19500	Sorghum	cytosol, endoplasmic reticulum, peroxisome	42.54	33.86
KRH49750	Soybean	cytosol	33.24	33.62
KRG89246	Soybean	cytosol	34.08	33.52
OQU92565	Sorghum	mitochondrion, plastid	26.2	33.45
KRH21128	Soybean	cytosol	25.07	32.36
KXG39676	Sorghum	cytosol, endoplasmic reticulum, peroxisome	36.34	32.25
EER87956	Sorghum	peroxisome	32.96	32.23
EER87960	Sorghum	cytosol	15.49	31.25
KXG19442	Sorghum	cytosol	32.39	31.17
Bra013884.1-P	Field mustard	cytosol	37.46	30.3
EER87955	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	31.83	28.97

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	EntrezGene:8081558	UniProt:C5WMV9	InterPro:DIOX_N	EnsemblPlants:EER95699
ProteinID:EER95699	ProteinID:EER95699.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF360	EnsemblPlantsGene:SORBI_3001G542600	SUPFAM:SSF51197	UniParc:UPI0001A83394	RefSeq:XP_002468701.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:80649921..80651559

Molecular Weight (calculated)

39180.7 Da

IEP (calculated)

5.762

GRAVY (calculated)

-0.216

Length

355 amino acids

Sequence
(BLAST)

001: MEMAGSLPVP SVQAMVATGG GHAPVPPRYL RPELATDDVV DGDATATIPI IDFQRLLLVD PEESARLHAA CQDWGFFQLI NHGVPEDVME AMKASTQAFF
101: ALPAEAKQQF RQQAGQLEGY GQLFVVSDDQ KLDWADVLYL NTQPPEHRNL SFWPDSFSRT LDTYSAAVKH VADRLLSAMS RNLDLTDPER LVAGGGGMMQ
201: SVRMNYYPPC AEAADKVLGF SPHSDSDLLT LVLQVNQIQG LQIRRPGDGA WLPITPRQGA FVVNVGDVLE IFTNGRYRSV EHRAVVNAHT ERLSVAAFHS
301: PSIHATIGPL PELLGDQEAP KYKTLDHQSF ITLFFSAKLQ GKSFLERMKK KKLSD

Best Arabidopsis Sequence Match ( AT1G17010.1 )
(BLAST)

001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.