Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G363100.1 | Wheat | cytosol | 96.28 | 96.28 |
| TraesCS5A01G539700.2 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 94.84 | 96.22 |
| TraesCS4B01G374200.1 | Wheat | cytosol | 82.23 | 82.47 |
| TraesCS3B01G592000.1 | Wheat | cytosol | 88.54 | 81.53 |
| TraesCS4B01G374100.2 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 81.66 | 70.9 |
| Os01t0351800-01 | Rice | cytosol | 66.76 | 67.73 |
| Os01t0352100-01 | Rice | cytosol | 63.04 | 62.86 |
| EER95699 | Sorghum | cytosol | 63.32 | 62.25 |
| Zm00001d048547_P001 | Maize | cytosol, peroxisome, plastid | 63.61 | 62.18 |
| GSMUA_Achr11P... | Banana | plastid | 57.02 | 57.85 |
| VIT_02s0012g00440.t01 | Wine grape | extracellular | 20.34 | 54.2 |
| VIT_02s0012g00320.t01 | Wine grape | cytosol | 41.55 | 53.11 |
| VIT_02s0012g00390.t01 | Wine grape | cytosol | 53.58 | 52.97 |
| VIT_02s0012g00450.t01 | Wine grape | cytosol, nucleus, peroxisome | 53.01 | 52.41 |
| VIT_02s0012g00400.t01 | Wine grape | cytosol, peroxisome, plastid | 51.29 | 51.73 |
| VIT_02s0012g00360.t01 | Wine grape | cytosol | 47.56 | 49.4 |
| Bra010470.1-P | Field mustard | cytosol | 36.96 | 48.31 |
| TraesCS3B01G440500.1 | Wheat | cytosol | 49.57 | 46.88 |
| Bra026693.1-P | Field mustard | cytosol | 47.85 | 46.65 |
| VIT_02s0012g00350.t01 | Wine grape | cytosol | 46.13 | 46.53 |
| AT1G17010.1 | Thale cress | cytosol | 47.85 | 46.26 |
| AT4G25310.1 | Thale cress | cytosol | 46.42 | 45.89 |
| KRH13456 | Soybean | cytosol | 46.13 | 45.61 |
| AT1G17020.1 | Thale cress | cytosol | 46.7 | 45.53 |
| KRH27437 | Soybean | cytosol | 46.7 | 45.53 |
| KRH42495 | Soybean | cytosol | 46.42 | 45.51 |
| Bra019177.1-P | Field mustard | cytosol | 46.13 | 45.48 |
| TraesCS1B01G234500.1 | Wheat | plastid | 34.38 | 45.45 |
| TraesCS2B01G077500.1 | Wheat | cytoskeleton, cytosol, peroxisome | 47.28 | 45.45 |
| VIT_02s0012g00410.t01 | Wine grape | plastid | 44.7 | 45.09 |
| AT4G25300.1 | Thale cress | cytosol | 45.85 | 44.94 |
| KRH58590 | Soybean | cytosol | 46.13 | 44.85 |
| TraesCS2B01G077800.1 | Wheat | cytosol | 46.99 | 44.81 |
| PGSC0003DMT400007989 | Potato | cytosol | 46.42 | 44.63 |
| Solyc02g071360.2.1 | Tomato | cytosol | 46.42 | 44.63 |
| Solyc02g071380.2.1 | Tomato | cytosol, nucleus, peroxisome | 45.56 | 44.29 |
| Bra026695.1-P | Field mustard | cytosol, nucleus, peroxisome | 42.98 | 44.12 |
| TraesCS4B01G335300.2 | Wheat | cytosol | 45.85 | 44.08 |
| TraesCS2B01G077600.1 | Wheat | cytosol | 46.42 | 44.02 |
| KRH71023 | Soybean | cytosol | 44.99 | 43.85 |
| Bra026008.1-P | Field mustard | cytosol, nucleus, peroxisome | 43.27 | 43.77 |
| Bra010469.1-P | Field mustard | cytosol | 43.84 | 43.71 |
| Solyc02g071490.2.1 | Tomato | cytosol | 44.99 | 43.49 |
| KRH75001 | Soybean | cytosol | 43.55 | 43.43 |
| KRH21858 | Soybean | cytosol | 44.41 | 43.42 |
| PGSC0003DMT400008001 | Potato | cytosol | 44.41 | 43.3 |
| Solyc02g071430.2.1 | Tomato | cytosol | 44.99 | 43.13 |
| PGSC0003DMT400007992 | Potato | cytosol, nucleus, peroxisome | 44.7 | 43.09 |
| Bra035046.1-P | Field mustard | cytosol | 44.13 | 43.02 |
| Bra010472.1-P | Field mustard | cytosol | 43.84 | 42.74 |
| PGSC0003DMT400018663 | Potato | cytosol | 44.13 | 42.66 |
| PGSC0003DMT400007963 | Potato | cytosol | 44.41 | 42.35 |
| KRH27439 | Soybean | cytosol | 43.55 | 42.34 |
| PGSC0003DMT400007999 | Potato | cytosol | 42.98 | 42.25 |
| AT1G78550.1 | Thale cress | cytosol, nucleus, peroxisome | 42.98 | 42.13 |
| KRH75184 | Soybean | cytosol | 29.8 | 41.77 |
| Solyc08g062370.2.1 | Tomato | cytoskeleton, cytosol, peroxisome | 21.2 | 41.57 |
| VIT_02s0012g00380.t01 | Wine grape | cytosol | 31.81 | 41.57 |
| KRH43438 | Soybean | nucleus | 32.09 | 41.48 |
| KRH71025 | Soybean | cytosol | 41.83 | 41.01 |
| Solyc02g071500.2.1 | Tomato | cytosol | 41.55 | 40.96 |
| Solyc02g071400.2.1 | Tomato | cytosol | 39.83 | 40.88 |
| KRH71028 | Soybean | cytosol | 42.41 | 40.66 |
| Solyc02g071450.2.1 | Tomato | cytosol | 41.83 | 40.56 |
| PGSC0003DMT400055956 | Potato | cytosol | 20.63 | 40.45 |
| Solyc02g071440.2.1 | Tomato | cytosol | 40.4 | 40.29 |
| Solyc02g071470.2.1 | Tomato | cytosol | 41.55 | 40.28 |
| PGSC0003DMT400018673 | Potato | cytosol | 32.09 | 40.0 |
| Solyc02g071410.2.1 | Tomato | cytosol | 41.26 | 40.0 |
| PGSC0003DMT400018670 | Potato | cytosol | 39.83 | 39.83 |
| PGSC0003DMT400007990 | Potato | nucleus | 24.64 | 39.81 |
| TraesCS3B01G497900.1 | Wheat | cytosol | 42.12 | 39.62 |
| KRG89247 | Soybean | cytosol, peroxisome, plastid | 26.07 | 38.56 |
| PGSC0003DMT400059406 | Potato | peroxisome | 26.65 | 38.11 |
| KRH49748 | Soybean | cytosol | 39.83 | 37.98 |
| TraesCS1B01G345200.1 | Wheat | cytosol | 38.68 | 37.5 |
| Solyc02g071480.2.1 | Tomato | cytosol, nucleus, peroxisome | 36.68 | 37.43 |
| KRH11118 | Soybean | cytosol, nucleus, peroxisome, plastid | 39.54 | 37.1 |
| KRH49750 | Soybean | cytosol | 37.25 | 37.04 |
| KRG89246 | Soybean | cytosol | 38.11 | 36.84 |
| TraesCS5B01G466400.1 | Wheat | cytosol | 36.68 | 36.16 |
| KRH58593 | Soybean | cytosol, peroxisome, plastid | 37.54 | 36.09 |
| KRH21128 | Soybean | cytosol | 28.37 | 36.0 |
| TraesCS3B01G520100.3 | Wheat | cytosol | 38.97 | 35.05 |
| TraesCS5B01G224800.1 | Wheat | cytosol, nucleus, peroxisome | 30.95 | 34.73 |
| TraesCS1B01G332300.1 | Wheat | cytosol | 33.81 | 34.1 |
| TraesCS7B01G041900.1 | Wheat | cytosol | 34.1 | 33.33 |
| TraesCS7B01G042000.1 | Wheat | cytosol | 24.64 | 32.82 |
| TraesCS7B01G042400.2 | Wheat | cytosol | 33.24 | 32.68 |
| TraesCS1B01G332200.1 | Wheat | cytosol | 32.38 | 31.92 |
| Bra013884.1-P | Field mustard | cytosol | 40.11 | 31.89 |
| TraesCS5B01G224900.1 | Wheat | cytosol | 32.38 | 31.74 |
| TraesCS7B01G042500.1 | Wheat | cytosol | 32.95 | 31.68 |
| TraesCS7B01G042100.2 | Wheat | cytosol | 31.81 | 31.27 |
| TraesCS6B01G351600.1 | Wheat | cytosol | 29.51 | 31.12 |
| TraesCS6B01G145400.1 | Wheat | cytosol | 30.95 | 31.03 |
| TraesCS7B01G042300.1 | Wheat | cytosol | 31.52 | 30.9 |
| TraesCS6B01G412800.1 | Wheat | cytosol | 31.23 | 30.62 |
| TraesCS5B01G282100.1 | Wheat | golgi | 30.66 | 29.08 |
| TraesCS7B01G041600.1 | Wheat | cytosol | 30.95 | 28.88 |
| TraesCS6B01G412700.1 | Wheat | cytosol | 28.94 | 28.45 |
| TraesCS7B01G042200.3 | Wheat | peroxisome | 26.93 | 25.68 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G374300.1 | EnsemblPlantsGene:TraesCS4B01G374300 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF360 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | SUPFAM:SSF51197 | MapMan:50.1.13 | : | : | : |
Description
No Description!
Coordinates
chr4B:+:658172378..658173872
Molecular Weight (calculated)
39180.8 Da
IEP (calculated)
5.282
GRAVY (calculated)
-0.349
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSLPVPSVQ ALVAATGGDD VPPRYLRPDA AAEAVTGDGD GEAQIPIIDH RRLLLELDHG GEESARLHRA CQDWGFFQLV NHSVPDDVVE SMKANIQQFF
101: QLPAETKKRF AQEEGQLEGY GQLFVVSDDQ KLDWADMLFL YAQPPERRKT RFWPDQPATF RSTLDRYSGA LKDVSDSLLA TMAKNLGLKR ETIAEKCTRG
201: MQSFRMNYYP PCAQAEKVIG LSPHSDANLL TLVLQVNHVQ GLQIKRNGSW LPVKPVPGAF IVNIGDMLEV FTNGRYRSIE HRAVVDPKEE RLSVAAFHFP
301: DMDAMIGPLE ELTAHEDDAY KTLDLESFMK IFFATKLEGK SFLDRMKLN
101: QLPAETKKRF AQEEGQLEGY GQLFVVSDDQ KLDWADMLFL YAQPPERRKT RFWPDQPATF RSTLDRYSGA LKDVSDSLLA TMAKNLGLKR ETIAEKCTRG
201: MQSFRMNYYP PCAQAEKVIG LSPHSDANLL TLVLQVNHVQ GLQIKRNGSW LPVKPVPGAF IVNIGDMLEV FTNGRYRSIE HRAVVDPKEE RLSVAAFHFP
301: DMDAMIGPLE ELTAHEDDAY KTLDLESFMK IFFATKLEGK SFLDRMKLN
001: MEAKGAAQWS SILVPSVQEM VKEKTITTVP PRYVRSDQDK TEVDDDFDVK IEIPIIDMKR LCSSTTMDSE VEKLDFACKE WGFFQLVNHG IDSSFLDKVK
101: SEIQDFFNLP MEEKKKFWQR PDEIEGFGQA FVVSEDQKLD WADLFFHTVQ PVELRKPHLF PKLPLPFRDT LEMYSSEVQS VAKILIAKMA RALEIKPEEL
201: EKLFDDVDSV QSMRMNYYPP CPQPDQVIGL TPHSDSVGLT VLMQVNDVEG LQIKKDGKWV PVKPLPNAFI VNIGDVLEII TNGTYRSIEH RGVVNSEKER
301: LSIATFHNVG MYKEVGPAKS LVERQKVARF KRLTMKEYND GLFSRTLDGK AYLDALRI
101: SEIQDFFNLP MEEKKKFWQR PDEIEGFGQA FVVSEDQKLD WADLFFHTVQ PVELRKPHLF PKLPLPFRDT LEMYSSEVQS VAKILIAKMA RALEIKPEEL
201: EKLFDDVDSV QSMRMNYYPP CPQPDQVIGL TPHSDSVGLT VLMQVNDVEG LQIKKDGKWV PVKPLPNAFI VNIGDVLEII TNGTYRSIEH RGVVNSEKER
301: LSIATFHNVG MYKEVGPAKS LVERQKVARF KRLTMKEYND GLFSRTLDGK AYLDALRI
Arabidopsis Description
SRG1Protein SRG1 [Source:UniProtKB/Swiss-Prot;Acc:Q39224]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.