Factsheet for PGSC0003DMT400007990

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400007992	Potato	cytosol, nucleus, peroxisome	85.19	50.83
PGSC0003DMT400008001	Potato	cytosol	79.17	47.77
PGSC0003DMT400007999	Potato	cytosol	75.0	45.63
PGSC0003DMT400018673	Potato	cytosol	48.15	37.14
PGSC0003DMT400018663	Potato	cytosol	53.24	31.86
PGSC0003DMT400018670	Potato	cytosol	47.22	29.23
PGSC0003DMT400007963	Potato	cytosol	48.61	28.69
PGSC0003DMT400007989	Potato	cytosol	46.76	27.82
Os10t0558750-01	Rice	cytosol, nucleus, peroxisome	35.19	27.24
TraesCS4B01G374300.1	Wheat	cytosol	39.81	24.64
GSMUA_Achr11P...	Banana	cytosol	40.28	24.44
TraesCS5A01G539800.1	Wheat	cytosol	39.35	24.43
TraesCS4D01G363100.1	Wheat	cytosol	38.89	24.07
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	39.35	24.01
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	39.35	23.94
GSMUA_Achr11P...	Banana	cytosol	39.35	23.94
TraesCS4D01G363200.1	Wheat	cytosol	38.43	23.85
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	38.89	23.66
TraesCS3D01G529900.1	Wheat	cytosol	38.43	23.65
TraesCS2D01G064000.1	Wheat	cytosol	29.63	23.62
GSMUA_AchrUn_...	Banana	cytosol, peroxisome	31.02	23.59
TraesCS4B01G374200.1	Wheat	cytosol	37.96	23.56
TraesCS4D01G363300.1	Wheat	cytosol	37.04	23.46
GSMUA_Achr11P...	Banana	plastid	37.04	23.26
TraesCS5A01G539700.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	37.04	23.26
EER95699	Sorghum	cytosol	37.96	23.1
Zm00001d048547_P001	Maize	cytosol, peroxisome, plastid	37.96	22.97
TraesCS3A01G524700.1	Wheat	cytosol	37.04	22.79
PGSC0003DMT400044918	Potato	cytosol	24.07	22.61
GSMUA_Achr5P20940_001	Banana	cytosol	37.5	22.56
Os01t0351800-01	Rice	cytosol	35.65	22.38
HORVU4Hr1G088340.42	Barley	cytosol	38.43	22.31
TraesCS4D01G363000.1	Wheat	cytosol	36.57	22.07
KXG32356	Sorghum	plastid	35.19	21.9
Os01t0352100-01	Rice	cytosol	35.19	21.71
Os10t0558200-00	Rice	cytosol	35.19	21.71
TraesCS5A01G539900.1	Wheat	cytosol	31.94	21.7
TraesCS3B01G592000.1	Wheat	cytosol	37.96	21.64
Zm00001d040597_P001	Maize	cytosol	35.65	21.63
EES02838	Sorghum	cytosol	34.72	21.25
TraesCS2B01G077600.1	Wheat	cytosol	36.11	21.2
TraesCS2D01G063500.1	Wheat	cytosol	36.11	21.2
EER91935	Sorghum	cytosol	35.19	21.11
TraesCS2D01G063800.1	Wheat	cytoskeleton, cytosol, peroxisome	35.65	21.04
Os10t0558700-02	Rice	cytosol, nucleus, peroxisome	34.72	21.01
TraesCS2D01G063400.1	Wheat	cytosol	35.65	20.92
HORVU2Hr1G010930.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	34.72	20.78
TraesCS2A01G065800.1	Wheat	cytosol	35.19	20.77
PGSC0003DMT400027666	Potato	cytosol, nucleus, peroxisome	34.72	20.66
TraesCS4B01G374100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	38.43	20.65
EER91934	Sorghum	cytosol	34.26	20.61
HORVU2Hr1G010950.3	Barley	cytoskeleton, cytosol, peroxisome	34.26	20.5
TraesCS2B01G077800.1	Wheat	cytosol	34.72	20.49
TraesCS2D01G064100.1	Wheat	cytosol	34.72	20.49
KXG37090	Sorghum	cytosol	34.26	20.44
EES15940	Sorghum	cytosol	33.8	20.39
TraesCS2A01G065400.1	Wheat	cytosol	34.72	20.38
TraesCS1D01G222800.1	Wheat	cytosol	33.33	20.34
OQU92296	Sorghum	cytosol	33.8	20.33
Zm00001d012819_P001	Maize	cytosol	34.26	20.33
HORVU1Hr1G056210.5	Barley	cytosol	33.33	20.28
Os10t0559500-01	Rice	cytosol	33.8	20.28
EES08209	Sorghum	cytosol	34.26	20.22
TraesCS3A01G477000.2	Wheat	cytosol	32.87	20.17
TraesCS2A01G065500.1	Wheat	cytosol	34.26	20.16
TraesCS2D01G063600.1	Wheat	cytosol	34.26	20.16
TraesCS1D01G333300.1	Wheat	cytosol	30.56	20.12
HORVU2Hr1G010960.1	Barley	cytosol, mitochondrion, peroxisome	33.33	20.11
KXG37089	Sorghum	cytosol	33.33	20.06
TraesCS2D01G063700.1	Wheat	cytoskeleton, cytosol, peroxisome	33.8	20.05
TraesCS3B01G440500.1	Wheat	cytosol	34.26	20.05
TraesCS3D01G403000.1	Wheat	cytosol	34.26	20.05
Os03t0856000-01	Rice	cytosol	33.33	19.89
Zm00001d041086_P001	Maize	cytosol	32.87	19.89
TraesCS2A01G065300.1	Wheat	cytosol	33.8	19.84
TraesCS3A01G407900.1	Wheat	cytosol	33.8	19.84
TraesCS2B01G077500.1	Wheat	cytoskeleton, cytosol, peroxisome	33.33	19.83
TraesCS2A01G065600.1	Wheat	cytoskeleton, cytosol, peroxisome	33.33	19.67
HORVU3Hr1G091210.2	Barley	cytosol	33.8	19.62
TraesCS3D01G471500.2	Wheat	cytosol	31.94	19.6
TraesCS1A01G331300.1	Wheat	cytosol	31.94	19.55
TraesCS3A01G407800.1	Wheat	cytosol	33.33	19.51
KXG34760	Sorghum	cytosol	32.41	19.5
TraesCS1A01G221200.1	Wheat	cytosol	31.94	19.49
Os10t0558400-00	Rice	cytosol, peroxisome	35.65	19.4
Os03t0439500-01	Rice	cytosol	33.33	19.35
PGSC0003DMT400049392	Potato	cytosol	31.02	19.31
TraesCS5A01G457300.1	Wheat	cytosol	31.02	19.31
TraesCS5B01G466400.1	Wheat	cytosol	31.48	19.21
TraesCS5D01G468100.1	Wheat	cytosol	31.48	19.21
Os09t0354100-00	Rice	cytosol, peroxisome	25.46	19.16
OQU92563	Sorghum	cytosol	32.87	19.09
Os10t0558900-01	Rice	cytosol	24.54	19.06
HORVU4Hr1G080610.2	Barley	cytosol	31.94	19.01
TraesCS4B01G335300.2	Wheat	cytosol	31.48	18.73
GSMUA_AchrUn_...	Banana	cytosol, peroxisome	18.52	18.69
GSMUA_Achr11P...	Banana	cytosol	22.22	18.68
EES12050	Sorghum	cytosol	30.56	18.64
Zm00001d029636_P001	Maize	extracellular	30.56	18.33
Zm00001d029218_P001	Maize	cytosol, peroxisome, plastid	25.46	17.86
TraesCS3B01G520100.3	Wheat	cytosol	31.94	17.78
EES02842	Sorghum	cytosol	31.48	17.66
TraesCS1A01G331400.1	Wheat	cytosol, peroxisome, plastid	31.48	17.53
TraesCS1B01G345200.1	Wheat	cytosol	29.17	17.5
TraesCS4D01G330600.1	Wheat	cytosol	29.17	17.31
KXG39676	Sorghum	cytosol, endoplasmic reticulum, peroxisome	31.48	17.0
KXG19500	Sorghum	cytosol, endoplasmic reticulum, peroxisome	34.72	16.82
HORVU3Hr1G104290.2	Barley	plastid	32.41	16.43
PGSC0003DMT400059406	Potato	peroxisome	18.52	16.39
PGSC0003DMT400073345	Potato	cytosol	26.39	16.06
TraesCSU01G175100.1	Wheat	cytosol	24.07	16.05
PGSC0003DMT400049384	Potato	cytosol	20.37	15.66
HORVU1Hr1G077370.1	Barley	plastid	30.09	15.4
Zm00001d041087_P001	Maize	cytosol	29.63	13.39
Os09t0353700-00	Rice	cytosol, peroxisome, plastid	25.0	13.3
TraesCS1B01G234500.1	Wheat	plastid	16.2	13.26
GSMUA_AchrUn_...	Banana	mitochondrion	28.24	9.89
OQU92565	Sorghum	mitochondrion, plastid	12.5	9.71
PGSC0003DMT400055956	Potato	cytosol	6.48	7.87
TraesCSU01G044600.1	Wheat	mitochondrion	6.94	7.28
TraesCS3D01G013500.1	Wheat	mitochondrion	4.63	5.92

Protein Annotations

EnsemblPlants:PGSC0003DMT400007990	EnsemblPlantsGene:PGSC0003DMG400003090	EntrezGene:102584100	Gene3D:2.60.120.330	InterPro:DIOX_N	InterPro:IPNS-like
InterPro:IPR027443	ncoils:Coil	PANTHER:PTHR10209	PANTHER:PTHR10209:SF168	PFAM:PF14226	PGSC:PGSC0003DMG400003090
RefSeq:XP_006355576.1	SEG:seg	SUPFAM:SSF51197	UniParc:UPI000295DD80	UniProt:M0ZTW2	MapMan:50.1.13

Description

Leucoanthocyanidin dioxygenase [Source:PGSC_GENE;Acc:PGSC0003DMG400003090]

Coordinates

chr2:-:30594268..30595100

Molecular Weight (calculated)

25259.3 Da

IEP (calculated)

5.923

GRAVY (calculated)

-0.625

Length

216 amino acids

Sequence
(BLAST)

001: MGELEVNYKE VPSVQELAKK KLVTIPSRYV RDDHDNSSIA SNDRNNKEVP VIDMQRLVNS NDHDIMNLEL NKLHFAAQHW GFFQLINHGV SSSVVEKMKH
101: ETQKFYDLPL EEKKKFERSP RDADGFGQLF AVSDEQKLDW ADLFYLKTAP PHLRMPIFSK LYLSLRETIE EYTEEIKELS MKVLEMLGKA LGIKEKEVKS
201: LFEEGMQSMR MNYYPP

Best Arabidopsis Sequence Match ( AT1G17010.1 )
(BLAST)

001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.