CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0558900-01	Rice	cytosol	44.6	44.6
VIT_02s0012g00440.t01	Wine grape	extracellular	20.86	44.27
OQU92563	Sorghum	cytosol	53.24	39.78
PGSC0003DMT400055956	Potato	cytosol	25.18	39.33
Solyc08g062370.2.1	Tomato	cytoskeleton, cytosol, peroxisome	25.18	39.33
Os10t0558700-02	Rice	cytosol, nucleus, peroxisome	48.92	38.1
GSMUA_AchrUn_...	Banana	cytosol, peroxisome	28.78	37.38
GSMUA_Achr11P...	Banana	cytosol	34.53	37.35
EER91935	Sorghum	cytosol	47.48	36.67
GSMUA_AchrUn_...	Banana	cytosol, peroxisome	35.25	34.51
EES02838	Sorghum	cytosol	43.53	34.28
GSMUA_Achr11P...	Banana	cytosol	42.81	33.52
Bra010470.1-P	Field mustard	cytosol	32.01	33.33
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	41.73	32.77
GSMUA_Achr5P20940_001	Banana	cytosol	42.09	32.59
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	41.37	32.39
KRG89247	Soybean	cytosol, peroxisome, plastid	27.34	32.2
KRH75184	Soybean	cytosol	28.42	31.73
GSMUA_Achr11P...	Banana	cytosol	40.29	31.46
EER91934	Sorghum	cytosol	40.29	31.2
EES02842	Sorghum	cytosol	43.17	31.17
Os10t0558750-01	Rice	cytosol, nucleus, peroxisome	30.58	30.47
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	38.49	30.14
KXG32356	Sorghum	plastid	37.41	29.97
VIT_02s0012g00450.t01	Wine grape	cytosol, nucleus, peroxisome	37.77	29.75
PGSC0003DMT400059406	Potato	peroxisome	25.18	28.69
VIT_02s0012g00360.t01	Wine grape	cytosol	33.09	27.38
VIT_02s0012g00390.t01	Wine grape	cytosol	34.53	27.2
KRH43438	Soybean	nucleus	26.26	27.04
VIT_02s0012g00400.t01	Wine grape	cytosol, peroxisome, plastid	32.73	26.3
EER95699	Sorghum	cytosol	33.45	26.2
EER87960	Sorghum	cytosol	16.55	26.14
Bra035046.1-P	Field mustard	cytosol	33.45	25.98
KRH27437	Soybean	cytosol	33.45	25.98
KRH71023	Soybean	cytosol	33.45	25.98
AT4G25310.1	Thale cress	cytosol	32.73	25.78
KRH21858	Soybean	cytosol	33.09	25.77
AT1G17010.1	Thale cress	cytosol	33.45	25.76
Bra010469.1-P	Field mustard	cytosol	32.37	25.71
KRH75001	Soybean	cytosol	32.37	25.71
AT1G17020.1	Thale cress	cytosol	33.09	25.7
Bra026693.1-P	Field mustard	cytosol	33.09	25.7
KXG37089	Sorghum	cytosol	33.09	25.63
Solyc02g071430.2.1	Tomato	cytosol	33.45	25.55
Bra019177.1-P	Field mustard	cytosol	32.37	25.42
Bra010472.1-P	Field mustard	cytosol	32.73	25.42
EES08209	Sorghum	cytosol	33.45	25.41
KXG34760	Sorghum	cytosol	32.73	25.35
Solyc02g071400.2.1	Tomato	cytosol	30.94	25.29
KXG37090	Sorghum	cytosol	32.73	25.14
PGSC0003DMT400007963	Potato	cytosol	33.09	25.14
KXG19500	Sorghum	cytosol, endoplasmic reticulum, peroxisome	40.29	25.11
AT4G25300.1	Thale cress	cytosol	32.01	25.0
Bra026695.1-P	Field mustard	cytosol, nucleus, peroxisome	30.58	25.0
KRH13456	Soybean	cytosol	31.65	24.93
Bra026008.1-P	Field mustard	cytosol, nucleus, peroxisome	30.94	24.93
KRH11118	Soybean	cytosol, nucleus, peroxisome, plastid	33.09	24.73
KRH71025	Soybean	cytosol	31.65	24.72
KRH58593	Soybean	cytosol, peroxisome, plastid	32.01	24.52
Solyc02g071380.2.1	Tomato	cytosol, nucleus, peroxisome	31.65	24.51
KRH42495	Soybean	cytosol	31.3	24.44
EES15940	Sorghum	cytosol	31.3	24.3
EES12050	Sorghum	cytosol	30.94	24.29
VIT_02s0012g00350.t01	Wine grape	cytosol	30.22	24.28
EER88660	Sorghum	cytosol	32.01	24.25
AT1G78550.1	Thale cress	cytosol, nucleus, peroxisome	30.94	24.16
PGSC0003DMT400007989	Potato	cytosol	31.3	23.97
KRH27439	Soybean	cytosol	30.94	23.96
KRH58590	Soybean	cytosol	30.94	23.96
OQU92296	Sorghum	cytosol	30.94	23.96
VIT_02s0012g00320.t01	Wine grape	cytosol	23.38	23.81
PGSC0003DMT400007999	Potato	cytosol	30.22	23.66
KRH49750	Soybean	cytosol	29.86	23.65
KRH71028	Soybean	cytosol	30.58	23.35
Solyc02g071440.2.1	Tomato	cytosol	29.14	23.14
Solyc02g071360.2.1	Tomato	cytosol	30.22	23.14
EES04177	Sorghum	cytosol	30.58	22.97
PGSC0003DMT400008001	Potato	cytosol	29.5	22.91
KXG39676	Sorghum	cytosol, endoplasmic reticulum, peroxisome	32.73	22.75
KRG89246	Soybean	cytosol	29.5	22.71
Solyc02g071490.2.1	Tomato	cytosol	29.5	22.71
PGSC0003DMT400007992	Potato	cytosol, nucleus, peroxisome	29.5	22.65
KRH21128	Soybean	cytosol	22.3	22.55
PGSC0003DMT400018663	Potato	cytosol	29.14	22.44
Solyc02g071500.2.1	Tomato	cytosol	28.42	22.32
EER89306	Sorghum	cytosol	28.78	22.28
KRH49748	Soybean	cytosol	29.14	22.13
Solyc02g071410.2.1	Tomato	cytosol	28.42	21.94
OQU75951	Sorghum	cytosol	26.98	21.68
KXG29110	Sorghum	cytosol	28.06	21.43
Solyc02g071450.2.1	Tomato	cytosol	27.7	21.39
Solyc02g071470.2.1	Tomato	cytosol	27.7	21.39
VIT_02s0012g00410.t01	Wine grape	plastid	26.62	21.39
PGSC0003DMT400018670	Potato	cytosol	26.26	20.92
KXG19442	Sorghum	cytosol	27.7	20.87
Bra013884.1-P	Field mustard	cytosol	32.73	20.73
Solyc02g071480.2.1	Tomato	cytosol, nucleus, peroxisome	25.18	20.47
EER87956	Sorghum	peroxisome	24.82	19.01
PGSC0003DMT400018673	Potato	cytosol	19.06	18.93
EER87955	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	25.18	17.95
GSMUA_AchrUn_...	Banana	mitochondrion	38.13	17.18
VIT_02s0012g00380.t01	Wine grape	cytosol	15.47	16.1
PGSC0003DMT400007990	Potato	nucleus	9.71	12.5

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	UniProt:A0A1Z5SA04	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	EnsemblPlants:OQU92565	ProteinID:OQU92565	ProteinID:OQU92565.1	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF208	EnsemblPlantsGene:SORBI_3001G366200	SUPFAM:SSF51197
UniParc:UPI000B8BAFE6	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:65484131..65495420

Molecular Weight (calculated)

31126.7 Da

IEP (calculated)

10.155

GRAVY (calculated)

-0.241

Length

278 amino acids

Sequence
(BLAST)

001: MQQERSGLFL WLTYRRLQRL AITAAMSRCP RDTSPRILVL RRSLLRTIAL TQFRSSISRS CLNPSHRRRS APSWLLPAST GASSSHSVDA YASETRELAY
101: RLLELMAKAV GAEPPAVLLG VFQGQPQGMR VNYYPPCRQA ADRVLGLSPH TDAGGLTLLL QMDNAAVDGL QIKKDGKWFS VNVVDGAFVV NVGDALEIMS
201: NGKFTSVEHR AVIHPAKERI SAAMFFYPCP HMMVGPLPEF VKGDKERYGS TSYEDFMKHY FATKLDGRKH LERLKLEQ

Best Arabidopsis Sequence Match ( AT1G78550.2 )
(BLAST)

001: MLSCWLQLVN HGIDSSFLEK LETEVQEFFN LPMKEKQKLW QRSGEFEGFG QVNIVSENQK LDWGDMFILT TEPIRSRKSH LFSKLPPPFR ETLETYSSEV
101: KSIAKILFAK MASVLEIKHE EMEDLFDDVW QSIKINYYPP CPQPDQVMGL TQHSDAAGLT ILLQVNQVEG LQIKKDGKWV VVKPLRDALV VNVGEILEII
201: TNGRYRSIEH RAVVNSEKER LSVAMFHSPG KETIIRPAKS LVDRQKQCLF KSMSTQEYFD AFFTQKLNGK SHLDLMRI

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SYM7]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.