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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d029218_P001 Maize cytosol, peroxisome, plastid 60.75 73.38
Os10t0558900-01 Rice cytosol 49.19 65.83
Os10t0558750-01 Rice cytosol, nucleus, peroxisome 47.58 63.44
Os10t0558700-02 Rice cytosol, nucleus, peroxisome 58.87 61.34
EER91935 Sorghum cytosol 57.53 59.44
EES02838 Sorghum cytosol 53.76 56.66
KXG32356 Sorghum plastid 52.69 56.48
GSMUA_AchrUn_... Banana cytosol, peroxisome 41.94 54.93
GSMUA_Achr11P... Banana cytosol 37.63 54.47
GSMUA_Achr11P... Banana cytosol 51.61 54.08
GSMUA_AchrUn_... Banana cytosol, peroxisome 30.91 53.74
OQU92565 Sorghum mitochondrion, plastid 39.78 53.24
GSMUA_Achr5P20940_001 Banana cytosol 51.08 52.92
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 50.27 52.82
GSMUA_Achr11P... Banana cytosol 50.54 52.81
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 50.27 52.68
EES02842 Sorghum cytosol 54.3 52.47
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 49.46 51.83
VIT_02s0012g00450.t01 Wine grape cytosol, nucleus, peroxisome 47.04 49.58
VIT_02s0012g00320.t01 Wine grape cytosol 36.29 49.45
VIT_02s0012g00390.t01 Wine grape cytosol 45.7 48.16
VIT_02s0012g00400.t01 Wine grape cytosol, peroxisome, plastid 43.55 46.82
EER95699 Sorghum cytosol 44.62 46.76
EER91934 Sorghum cytosol 44.89 46.52
VIT_02s0012g00360.t01 Wine grape cytosol 41.4 45.83
VIT_02s0012g00350.t01 Wine grape cytosol 42.47 45.66
KXG19500 Sorghum cytosol, endoplasmic reticulum, peroxisome 54.3 45.29
KXG37090 Sorghum cytosol 43.28 44.48
VIT_02s0012g00440.t01 Wine grape extracellular 15.59 44.27
EES08209 Sorghum cytosol 43.55 44.26
KXG37089 Sorghum cytosol 42.47 44.01
Solyc02g071430.2.1 Tomato cytosol 41.67 42.58
KRH75184 Soybean cytosol 28.49 42.57
KXG34760 Sorghum cytosol 40.86 42.34
KRH27437 Soybean cytosol 40.59 42.18
KRH75001 Soybean cytosol 39.25 41.71
VIT_02s0012g00410.t01 Wine grape plastid 38.71 41.62
Bra010470.1-P Field mustard cytosol 29.84 41.57
Bra026693.1-P Field mustard cytosol 39.78 41.34
PGSC0003DMT400007989 Potato cytosol 40.32 41.32
PGSC0003DMT400007963 Potato cytosol 40.59 41.26
Solyc02g071400.2.1 Tomato cytosol 37.63 41.18
EES12050 Sorghum cytosol 38.98 40.96
KRH21858 Soybean cytosol 39.25 40.9
KRH71023 Soybean cytosol 39.25 40.78
Solyc02g071360.2.1 Tomato cytosol 39.78 40.77
Solyc08g062370.2.1 Tomato cytoskeleton, cytosol, peroxisome 19.35 40.45
KRH13456 Soybean cytosol 38.17 40.23
EES15940 Sorghum cytosol 38.71 40.22
KRH71025 Soybean cytosol 38.44 40.17
KRH58590 Soybean cytosol 38.71 40.11
AT1G17020.1 Thale cress cytosol 38.44 39.94
KRH42495 Soybean cytosol 38.17 39.89
PGSC0003DMT400055956 Potato cytosol 19.09 39.89
Solyc02g071440.2.1 Tomato cytosol 37.37 39.71
AT1G17010.1 Thale cress cytosol 38.17 39.34
VIT_02s0012g00380.t01 Wine grape cytosol 28.23 39.33
OQU92296 Sorghum cytosol 37.9 39.28
KRH27439 Soybean cytosol 37.63 39.0
Solyc02g071380.2.1 Tomato cytosol, nucleus, peroxisome 37.63 39.0
AT4G25300.1 Thale cress cytosol 37.1 38.76
Solyc02g071500.2.1 Tomato cytosol 36.83 38.7
AT4G25310.1 Thale cress cytosol 36.56 38.53
Bra019177.1-P Field mustard cytosol 36.56 38.42
Solyc02g071480.2.1 Tomato cytosol, nucleus, peroxisome 35.22 38.3
Bra035046.1-P Field mustard cytosol 36.83 38.27
Bra026695.1-P Field mustard cytosol, nucleus, peroxisome 34.95 38.24
EES04177 Sorghum cytosol 37.9 38.11
PGSC0003DMT400007999 Potato cytosol 36.29 38.03
Bra010472.1-P Field mustard cytosol 36.56 37.99
PGSC0003DMT400008001 Potato cytosol 36.56 37.99
PGSC0003DMT400018663 Potato cytosol 36.83 37.95
PGSC0003DMT400018673 Potato cytosol 28.49 37.86
KRH43438 Soybean nucleus 27.42 37.78
Solyc02g071470.2.1 Tomato cytosol 36.56 37.78
Bra010469.1-P Field mustard cytosol 35.48 37.71
KRH71028 Soybean cytosol 36.83 37.64
PGSC0003DMT400007992 Potato cytosol, nucleus, peroxisome 36.56 37.57
Solyc02g071410.2.1 Tomato cytosol 36.29 37.5
KRH21128 Soybean cytosol 27.69 37.45
Solyc02g071490.2.1 Tomato cytosol 36.29 37.4
Bra026008.1-P Field mustard cytosol, nucleus, peroxisome 34.68 37.39
Solyc02g071450.2.1 Tomato cytosol 36.02 37.22
AT1G78550.1 Thale cress cytosol, nucleus, peroxisome 34.95 36.52
KRH11118 Soybean cytosol, nucleus, peroxisome, plastid 36.29 36.29
KRG89246 Soybean cytosol 34.14 35.18
KRG89247 Soybean cytosol, peroxisome, plastid 22.31 35.17
EER89306 Sorghum cytosol 33.87 35.1
KXG39676 Sorghum cytosol, endoplasmic reticulum, peroxisome 37.63 35.0
PGSC0003DMT400018670 Potato cytosol 32.8 34.96
KRH49750 Soybean cytosol 32.8 34.76
EER87960 Sorghum cytosol 16.4 34.66
KXG29110 Sorghum cytosol 33.87 34.62
KRH58593 Soybean cytosol, peroxisome, plastid 33.6 34.44
OQU75951 Sorghum cytosol 31.99 34.39
PGSC0003DMT400059406 Potato peroxisome 22.31 34.02
KRH49748 Soybean cytosol 33.33 33.88
EER88660 Sorghum cytosol 32.8 33.24
PGSC0003DMT400007990 Potato nucleus 19.09 32.87
KXG19442 Sorghum cytosol 31.45 31.71
EER87956 Sorghum peroxisome 30.65 31.41
Bra013884.1-P Field mustard cytosol 33.87 28.7
EER87955 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 29.84 28.46
GSMUA_AchrUn_... Banana mitochondrion 42.47 25.61
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13EntrezGene:8082622UniProt:C5WZM7InterPro:DIOX_NProteinID:EER92241.1
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0046872GO:GO:0055114InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443ProteinID:OQU92560.1
ProteinID:OQU92561.1ProteinID:OQU92562.1EnsemblPlants:OQU92563ProteinID:OQU92563ProteinID:OQU92563.1InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171PFAM:PF14226PRINTS:PR00682PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF208
EnsemblPlantsGene:SORBI_3001G366100SUPFAM:SSF51197UniParc:UPI0001A820DCRefSeq:XP_002465243.1SEG:seg:
Description
hypothetical protein
Coordinates
chr1:+:65469406..65481963
Molecular Weight (calculated)
41301.9 Da
IEP (calculated)
5.046
GRAVY (calculated)
-0.328
Length
372 amino acids
Sequence
(BLAST)
001: MADAARGMGS PSLPVANVQA LAETCNTGVD EPVPWRYLSK DPTAEEVVAA DDSACAIPVI DFRKLLDPES SSSECARLGS ACHHWGFFQL INHGVPDEVI
101: ANLKKDVVGF FKQPLEAKKE CAQQADSLEG YGQAFVVSED QKLDWADMLY LIVQPRESRD MRFWPTRPAS FRDSVDSYSM EASKLAYQLL EFMAKGVGAA
201: DDDDDPAASL RLQGVFQGQV RGMRVNYYPP CRQAADRVLG LSPHTDPNGL TLLLQMNDHD VQGLQVSKDG RWFPVQALDG AFVVNVGDAL EIVSNGAFKS
301: VEHRAVIHPT KERISAALFH FPDQDRMLGP LPELVKKGDR VRYGTRSYQD FLKQYFTAKL DGRKLIESFK LE
Best Arabidopsis Sequence Match ( AT1G17010.1 )
(BLAST)
001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.