Factsheet for GSMUA_Achr11P04480_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	90.73	90.99
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	89.89	90.4
GSMUA_AchrUn_...	Banana	cytosol, peroxisome	71.07	89.08
GSMUA_Achr11P...	Banana	cytosol	88.76	89.01
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	87.64	87.89
GSMUA_Achr11P...	Banana	cytosol	62.64	86.77
GSMUA_AchrUn_...	Banana	cytosol, peroxisome	51.97	86.45
GSMUA_Achr5P20940_001	Banana	cytosol	66.29	65.74
VIT_02s0012g00320.t01	Wine grape	cytosol	42.98	56.04
EER91934	Sorghum	cytosol	53.93	53.48
Zm00001d029218_P001	Maize	cytosol, peroxisome, plastid	45.79	52.92
GSMUA_Achr11P...	Banana	plastid	50.84	52.62
Zm00001d040597_P001	Maize	cytosol	52.25	52.25
Os10t0558900-01	Rice	cytosol	40.73	52.16
VIT_02s0012g00390.t01	Wine grape	cytosol	51.69	52.12
VIT_02s0012g00450.t01	Wine grape	cytosol, nucleus, peroxisome	51.12	51.56
Os10t0559500-01	Rice	cytosol	51.97	51.39
HORVU1Hr1G056210.5	Barley	cytosol	51.12	51.27
EER91935	Sorghum	cytosol	51.69	51.11
Os10t0558750-01	Rice	cytosol, nucleus, peroxisome	39.89	50.9
VIT_02s0012g00400.t01	Wine grape	cytosol, peroxisome, plastid	49.16	50.58
TraesCS1A01G221200.1	Wheat	cytosol	50.28	50.56
TraesCS1D01G222800.1	Wheat	cytosol	50.28	50.56
OQU92563	Sorghum	cytosol	52.81	50.54
Os10t0558700-02	Rice	cytosol, nucleus, peroxisome	50.28	50.14
Os10t0558200-00	Rice	cytosol	49.16	50.0
VIT_02s0012g00360.t01	Wine grape	cytosol	46.91	49.7
EES02838	Sorghum	cytosol	49.16	49.58
Bra026693.1-P	Field mustard	cytosol	48.31	48.04
TraesCS1B01G234500.1	Wheat	plastid	35.39	47.73
EES02842	Sorghum	cytosol	51.4	47.53
VIT_02s0012g00350.t01	Wine grape	cytosol	46.07	47.4
KXG32356	Sorghum	plastid	46.07	47.26
KRH27437	Soybean	cytosol	47.19	46.93
Os10t0558400-00	Rice	cytosol, peroxisome	52.25	46.85
VIT_02s0012g00440.t01	Wine grape	extracellular	17.13	46.56
KRH21858	Soybean	cytosol	46.07	45.94
KRH58590	Soybean	cytosol	46.07	45.68
AT1G17020.1	Thale cress	cytosol	45.79	45.53
Solyc02g071430.2.1	Tomato	cytosol	46.35	45.33
Bra010470.1-P	Field mustard	cytosol	33.71	44.94
KRH42495	Soybean	cytosol	44.66	44.66
AT1G17010.1	Thale cress	cytosol	45.22	44.6
VIT_02s0012g00380.t01	Wine grape	cytosol	33.43	44.57
KRH13456	Soybean	cytosol	44.1	44.48
KRH27439	Soybean	cytosol	44.66	44.29
Bra010472.1-P	Field mustard	cytosol	44.1	43.85
KRH71023	Soybean	cytosol	44.1	43.85
KRH71025	Soybean	cytosol	43.82	43.82
KRH75001	Soybean	cytosol	42.98	43.71
TraesCS3A01G477000.2	Wheat	cytosol	42.98	43.47
PGSC0003DMT400007963	Potato	cytosol	44.66	43.44
VIT_02s0012g00410.t01	Wine grape	plastid	42.13	43.35
AT4G25310.1	Thale cress	cytosol	42.98	43.34
Bra035046.1-P	Field mustard	cytosol	43.54	43.3
Bra026695.1-P	Field mustard	cytosol, nucleus, peroxisome	41.29	43.24
Solyc02g071400.2.1	Tomato	cytosol	41.29	43.24
Bra019177.1-P	Field mustard	cytosol	42.98	43.22
PGSC0003DMT400018673	Potato	cytosol	33.99	43.21
PGSC0003DMT400007999	Potato	cytosol	42.98	43.1
Solyc02g071450.2.1	Tomato	cytosol	43.54	43.06
Bra010469.1-P	Field mustard	cytosol	42.13	42.86
Solyc02g071440.2.1	Tomato	cytosol	42.13	42.86
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	42.42	42.78
PGSC0003DMT400008001	Potato	cytosol	42.98	42.74
AT4G25300.1	Thale cress	cytosol	42.7	42.7
TraesCS3D01G471500.2	Wheat	cytosol	42.13	42.61
KRH71028	Soybean	cytosol	43.54	42.58
KRH75184	Soybean	cytosol	29.78	42.57
Solyc02g071410.2.1	Tomato	cytosol	42.7	42.22
Bra026008.1-P	Field mustard	cytosol, nucleus, peroxisome	40.73	42.03
Solyc02g071360.2.1	Tomato	cytosol	42.7	41.87
PGSC0003DMT400007989	Potato	cytosol	42.42	41.6
PGSC0003DMT400055956	Potato	cytosol	20.79	41.57
PGSC0003DMT400018663	Potato	cytosol	42.13	41.55
Solyc02g071500.2.1	Tomato	cytosol	41.29	41.53
AT1G78550.1	Thale cress	cytosol, nucleus, peroxisome	41.29	41.29
Solyc02g071480.2.1	Tomato	cytosol, nucleus, peroxisome	39.61	41.23
Solyc02g071470.2.1	Tomato	cytosol	41.57	41.11
GSMUA_Achr11P...	Banana	cytosol	38.2	41.09
Solyc08g062370.2.1	Tomato	cytoskeleton, cytosol, peroxisome	20.51	41.01
GSMUA_AchrUn_...	Banana	mitochondrion	71.07	41.0
Solyc02g071490.2.1	Tomato	cytosol	41.57	41.0
OQU92296	Sorghum	cytosol	41.29	40.95
Solyc02g071380.2.1	Tomato	cytosol, nucleus, peroxisome	41.29	40.95
Os09t0354100-00	Rice	cytosol, peroxisome	32.58	40.42
OQU92565	Sorghum	mitochondrion, plastid	31.46	40.29
PGSC0003DMT400007990	Potato	nucleus	24.44	40.28
TraesCS5D01G468100.1	Wheat	cytosol	39.89	40.11
TraesCS5A01G457300.1	Wheat	cytosol	39.04	40.06
PGSC0003DMT400007992	Potato	cytosol, nucleus, peroxisome	40.73	40.06
Zm00001d029636_P001	Maize	extracellular	40.45	40.0
EES12050	Sorghum	cytosol	39.61	39.83
PGSC0003DMT400018670	Potato	cytosol	39.04	39.83
Os03t0439500-01	Rice	cytosol	41.57	39.78
TraesCS1B01G345200.1	Wheat	cytosol	40.17	39.72
KRH43438	Soybean	nucleus	30.06	39.63
KRG89247	Soybean	cytosol, peroxisome, plastid	26.12	39.41
TraesCS1A01G331300.1	Wheat	cytosol	39.04	39.38
KRG89246	Soybean	cytosol	39.89	39.34
KRH49750	Soybean	cytosol	38.76	39.32
KRH11118	Soybean	cytosol, nucleus, peroxisome, plastid	40.45	38.71
TraesCS5B01G466400.1	Wheat	cytosol	38.48	38.7
KRH58593	Soybean	cytosol, peroxisome, plastid	39.33	38.57
TraesCS3B01G520100.3	Wheat	cytosol	41.85	38.4
KRH21128	Soybean	cytosol	29.49	38.18
KRH49748	Soybean	cytosol	38.76	37.7
KXG19500	Sorghum	cytosol, endoplasmic reticulum, peroxisome	47.19	37.67
HORVU3Hr1G104290.2	Barley	plastid	42.98	35.92
TraesCS1A01G331400.1	Wheat	cytosol, peroxisome, plastid	39.04	35.82
TraesCS1D01G333300.1	Wheat	cytosol	32.87	35.67
PGSC0003DMT400059406	Potato	peroxisome	24.16	35.25
KXG39676	Sorghum	cytosol, endoplasmic reticulum, peroxisome	38.2	34.0
HORVU1Hr1G077370.1	Barley	plastid	39.61	33.41
Bra013884.1-P	Field mustard	cytosol	39.33	31.89
Os09t0353700-00	Rice	cytosol, peroxisome, plastid	34.83	30.54

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr11G04480_001
EnsemblPlants:GSMUA_Achr11P04480_001	EnsemblPlants:GSMUA_Achr11T04480_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0RPC8
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF360
SUPFAM:SSF51197	UniParc:UPI000296F0E2	:	:	:	:

Description

S-norcoclaurine synthase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G04480_001]

Coordinates

chr11:-:3359469..3360903

Molecular Weight (calculated)

39712.8 Da

IEP (calculated)

6.187

GRAVY (calculated)

-0.161

Length

356 amino acids

Sequence
(BLAST)

001: MAKPSFQRLG TSIDVPNVQA LAASIANPAD VPPRYVRTEA KADPVVSDGD SELPVIDFSR LLHHRFSKEE YAKLHHACAD WGFFQLINHG VPDQVMEKIK
101: ADIVEFFKLP LEEKKAFAQL PNSLEGYGQA FVMSDDQKLD WADMLSLITR PLHSRNIDLW PAQPLTFRDS LSCYSMELKS VAGTLLEVMA KNLGVAPEEF
201: SSIFQDQTQA VRFNYYPPCP RADEVLGLSP HTDGSGLTLL LQVNDVEGLH IRKRGNWFPV KPLPGALIAN IGDIIEILSN GVYKSVEHQA IINVKEERLS
301: IATFHGPREY SAVVGPLAEI VKGCNPKYVS MSYGEFMKAY LSTKLEGRRL MESLKL

Best Arabidopsis Sequence Match ( AT1G17020.1 )
(BLAST)

001: MEAKGAAQWS SILVPSVQEM VKEKTITTVP PRYVRSDQDK TEVDDDFDVK IEIPIIDMKR LCSSTTMDSE VEKLDFACKE WGFFQLVNHG IDSSFLDKVK
101: SEIQDFFNLP MEEKKKFWQR PDEIEGFGQA FVVSEDQKLD WADLFFHTVQ PVELRKPHLF PKLPLPFRDT LEMYSSEVQS VAKILIAKMA RALEIKPEEL
201: EKLFDDVDSV QSMRMNYYPP CPQPDQVIGL TPHSDSVGLT VLMQVNDVEG LQIKKDGKWV PVKPLPNAFI VNIGDVLEII TNGTYRSIEH RGVVNSEKER
301: LSIATFHNVG MYKEVGPAKS LVERQKVARF KRLTMKEYND GLFSRTLDGK AYLDALRI

Arabidopsis Description

SRG1Protein SRG1 [Source:UniProtKB/Swiss-Prot;Acc:Q39224]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.