Factsheet for TraesCS1B01G234500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G221200.1	Wheat	cytosol	84.85	63.28
TraesCS1D01G222800.1	Wheat	cytosol	84.47	62.99
HORVU1Hr1G056210.5	Barley	cytosol	84.09	62.54
GSMUA_AchrUn_...	Banana	cytosol, peroxisome	40.53	50.0
Os10t0559500-01	Rice	cytosol	67.42	49.44
EER91934	Sorghum	cytosol	66.29	48.75
GSMUA_Achr11P...	Banana	cytosol	45.83	47.08
VIT_02s0012g00440.t01	Wine grape	extracellular	21.21	42.75
GSMUA_AchrUn_...	Banana	cytosol, peroxisome	45.83	42.61
KRG89247	Soybean	cytosol, peroxisome, plastid	35.23	39.41
PGSC0003DMT400055956	Potato	cytosol	26.52	39.33
Solyc08g062370.2.1	Tomato	cytoskeleton, cytosol, peroxisome	26.52	39.33
Bra010470.1-P	Field mustard	cytosol	38.26	37.83
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	50.0	37.29
GSMUA_Achr5P20940_001	Banana	cytosol	50.38	37.05
GSMUA_Achr11P...	Banana	cytosol	49.24	36.62
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	48.86	36.34
KRH75184	Soybean	cytosol	33.71	35.74
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	47.73	35.49
GSMUA_Achr11P...	Banana	cytosol	47.73	35.39
TraesCS4B01G374200.1	Wheat	cytosol	45.83	34.77
VIT_02s0012g00450.t01	Wine grape	cytosol, nucleus, peroxisome	46.21	34.56
TraesCS4B01G374300.1	Wheat	cytosol	45.45	34.38
VIT_02s0012g00400.t01	Wine grape	cytosol, peroxisome, plastid	42.42	32.37
VIT_02s0012g00390.t01	Wine grape	cytosol	43.18	32.29
PGSC0003DMT400059406	Potato	peroxisome	29.55	31.97
TraesCS3B01G592000.1	Wheat	cytosol	45.45	31.66
AT1G17020.1	Thale cress	cytosol	42.8	31.56
Bra026693.1-P	Field mustard	cytosol	42.8	31.56
KRH43438	Soybean	nucleus	32.2	31.48
AT4G25300.1	Thale cress	cytosol	42.42	31.46
AT4G25310.1	Thale cress	cytosol	42.05	31.44
TraesCS3B01G440500.1	Wheat	cytosol	43.94	31.44
VIT_02s0012g00360.t01	Wine grape	cytosol	39.77	31.25
AT1G17010.1	Thale cress	cytosol	42.42	31.02
KRH27437	Soybean	cytosol	42.05	31.01
VIT_02s0012g00350.t01	Wine grape	cytosol	39.77	30.35
Bra010469.1-P	Field mustard	cytosol	40.15	30.29
KRH71023	Soybean	cytosol	40.91	30.17
VIT_02s0012g00320.t01	Wine grape	cytosol	31.06	30.04
TraesCS1B01G345200.1	Wheat	cytosol	40.91	30.0
Solyc02g071430.2.1	Tomato	cytosol	41.29	29.95
KRH27439	Soybean	cytosol	40.53	29.8
KRH42495	Soybean	cytosol	40.15	29.78
Bra010472.1-P	Field mustard	cytosol	40.15	29.61
TraesCS2B01G077800.1	Wheat	cytosol	40.91	29.51
PGSC0003DMT400007989	Potato	cytosol	40.53	29.48
Solyc02g071360.2.1	Tomato	cytosol	40.53	29.48
KRH21858	Soybean	cytosol	39.77	29.41
TraesCS7B01G042000.1	Wheat	cytosol	29.17	29.39
Bra019177.1-P	Field mustard	cytosol	39.39	29.38
KRH58590	Soybean	cytosol	39.77	29.25
PGSC0003DMT400007963	Potato	cytosol	40.53	29.23
KRH13456	Soybean	cytosol	39.02	29.18
Bra026008.1-P	Field mustard	cytosol, nucleus, peroxisome	37.88	28.99
AT1G78550.1	Thale cress	cytosol, nucleus, peroxisome	38.64	28.65
Bra026695.1-P	Field mustard	cytosol, nucleus, peroxisome	36.74	28.53
Solyc02g071400.2.1	Tomato	cytosol	36.74	28.53
Bra035046.1-P	Field mustard	cytosol	38.64	28.49
KRH71025	Soybean	cytosol	38.26	28.37
TraesCS4B01G374100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	43.18	28.36
KRH75001	Soybean	cytosol	37.5	28.29
TraesCS2B01G077500.1	Wheat	cytoskeleton, cytosol, peroxisome	38.64	28.1
TraesCS4B01G335300.2	Wheat	cytosol	38.64	28.1
TraesCS3B01G520100.3	Wheat	cytosol	41.29	28.09
PGSC0003DMT400008001	Potato	cytosol	37.88	27.93
KRH49750	Soybean	cytosol	37.12	27.92
Solyc02g071500.2.1	Tomato	cytosol	37.12	27.68
Solyc02g071450.2.1	Tomato	cytosol	37.5	27.5
KRH71028	Soybean	cytosol	37.5	27.2
Solyc02g071440.2.1	Tomato	cytosol	35.98	27.14
Solyc02g071380.2.1	Tomato	cytosol, nucleus, peroxisome	36.74	27.02
TraesCS2B01G077600.1	Wheat	cytosol	37.5	26.9
KRG89246	Soybean	cytosol	36.74	26.87
TraesCS5B01G466400.1	Wheat	cytosol	35.98	26.84
KRH49748	Soybean	cytosol	37.12	26.78
PGSC0003DMT400007999	Potato	cytosol	35.98	26.76
TraesCS3B01G497900.1	Wheat	cytosol	37.5	26.68
Solyc02g071410.2.1	Tomato	cytosol	36.36	26.67
VIT_02s0012g00410.t01	Wine grape	plastid	34.47	26.3
Solyc02g071470.2.1	Tomato	cytosol	35.61	26.11
KRH11118	Soybean	cytosol, nucleus, peroxisome, plastid	36.74	26.08
TraesCS5B01G224800.1	Wheat	cytosol, nucleus, peroxisome	30.68	26.05
PGSC0003DMT400007992	Potato	cytosol, nucleus, peroxisome	35.61	25.97
Solyc02g071490.2.1	Tomato	cytosol	35.23	25.76
PGSC0003DMT400018663	Potato	cytosol	34.85	25.48
KRH58593	Soybean	cytosol, peroxisome, plastid	34.85	25.34
KRH21128	Soybean	cytosol	26.14	25.09
TraesCS6B01G412800.1	Wheat	cytosol	33.71	25.0
Solyc02g071480.2.1	Tomato	cytosol, nucleus, peroxisome	32.2	24.85
TraesCS7B01G042400.2	Wheat	cytosol	33.33	24.79
TraesCS7B01G041900.1	Wheat	cytosol	33.33	24.65
PGSC0003DMT400018670	Potato	cytosol	32.58	24.64
TraesCS1B01G332300.1	Wheat	cytosol	32.2	24.57
TraesCS6B01G145400.1	Wheat	cytosol	31.82	24.14
PGSC0003DMT400018673	Potato	cytosol	25.38	23.93
TraesCS7B01G042100.2	Wheat	cytosol	31.82	23.66
TraesCS7B01G042200.3	Wheat	peroxisome	32.58	23.5
TraesCS1B01G332200.1	Wheat	cytosol	31.44	23.45
TraesCS6B01G351600.1	Wheat	cytosol	29.17	23.26
TraesCS7B01G042500.1	Wheat	cytosol	31.82	23.14
TraesCS6B01G412700.1	Wheat	cytosol	31.06	23.1
TraesCS5B01G224900.1	Wheat	cytosol	30.68	22.75
TraesCS7B01G042300.1	Wheat	cytosol	30.68	22.75
Bra013884.1-P	Field mustard	cytosol	37.5	22.55
VIT_02s0012g00380.t01	Wine grape	cytosol	22.35	22.1
TraesCS5B01G282100.1	Wheat	golgi	30.68	22.01
TraesCS7B01G041600.1	Wheat	cytosol	31.06	21.93
GSMUA_AchrUn_...	Banana	mitochondrion	46.59	19.94
PGSC0003DMT400007990	Potato	nucleus	13.26	16.2

Protein Annotations

EnsemblPlants:TraesCS1B01G234500.1	EnsemblPlantsGene:TraesCS1B01G234500	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF158	PFAM:PF03171	PFscan:PS51471	SEG:seg
SUPFAM:SSF51197	MapMan:50.1.13	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:420365354..420366443

Molecular Weight (calculated)

29722.6 Da

IEP (calculated)

9.705

GRAVY (calculated)

-0.366

Length

264 amino acids

Sequence
(BLAST)

001: MPWTGACWGR RRPTSPSSSA FPWRRSRPWR YRPTACRASA TTSSSPKEQK LDWVDLLFLA TRPAQERSLD LWPTKPSTFR DTLDKYTTEL ASVAEQLFRF
101: MAKDLGVDQE ALLGTFKGLP QCVRINYYPP CRQAGKVLGL SPHTDGVGMT LLLHANDVQG LQIRKDGEWF SVHALPGALV VNIGDVLEIL TNGKYRSIEH
201: RAVVNPDKER ITIAAFHSVH LPCTIGPFQE LGDARYKTVD GLDFTKGYFA AKLEGRRYLE SLKL

Best Arabidopsis Sequence Match ( AT1G17010.1 )
(BLAST)

001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.