Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G233700.1 | Wheat | cytosol | 94.94 | 94.94 |
| TraesCS5A01G226400.1 | Wheat | cytosol | 94.38 | 92.82 |
| TraesCS5B01G224800.1 | Wheat | cytosol, nucleus, peroxisome | 76.4 | 87.46 |
| TraesCS5D01G233800.1 | Wheat | cytosol | 73.6 | 85.34 |
| TraesCS6B01G351600.1 | Wheat | cytosol | 72.47 | 77.95 |
| HORVU5Hr1G065620.7 | Barley | plastid | 75.84 | 73.57 |
| Zm00001d030548_P001 | Maize | extracellular | 61.52 | 62.04 |
| Os02t0280700-01 | Rice | cytosol | 59.83 | 60.68 |
| Os06t0176700-01 | Rice | cytosol | 59.27 | 60.29 |
| Os06t0178500-01 | Rice | cytosol | 59.27 | 60.29 |
| KXG19442 | Sorghum | cytosol | 58.15 | 56.1 |
| TraesCS7B01G042400.2 | Wheat | cytosol | 55.34 | 55.49 |
| TraesCS7B01G042000.1 | Wheat | cytosol | 39.61 | 53.82 |
| TraesCS7B01G041900.1 | Wheat | cytosol | 53.09 | 52.94 |
| TraesCS7B01G042100.2 | Wheat | cytosol | 51.69 | 51.83 |
| TraesCS6B01G145400.1 | Wheat | cytosol | 50.56 | 51.72 |
| TraesCS7B01G042300.1 | Wheat | cytosol | 51.4 | 51.4 |
| TraesCS1B01G332300.1 | Wheat | cytosol | 48.31 | 49.71 |
| TraesCS6B01G412800.1 | Wheat | cytosol | 48.88 | 48.88 |
| TraesCS6B01G412700.1 | Wheat | cytosol | 48.31 | 48.45 |
| TraesCS1B01G332200.1 | Wheat | cytosol | 48.03 | 48.31 |
| TraesCS7B01G042500.1 | Wheat | cytosol | 47.75 | 46.83 |
| TraesCS7B01G042200.3 | Wheat | peroxisome | 46.91 | 45.63 |
| Bra002299.1-P | Field mustard | cytosol | 19.1 | 44.44 |
| VIT_11s0118g00400.t01 | Wine grape | peroxisome | 33.15 | 43.07 |
| PGSC0003DMT400049384 | Potato | cytosol | 33.43 | 42.35 |
| CDY28799 | Canola | cytoskeleton, cytosol, peroxisome | 25.84 | 40.89 |
| Bra022690.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 25.84 | 40.89 |
| KRH60778 | Soybean | cytosol, nucleus, peroxisome | 40.45 | 40.45 |
| PGSC0003DMT400073345 | Potato | cytosol | 39.89 | 40.0 |
| Solyc06g068270.2.1 | Tomato | nucleus | 39.89 | 40.0 |
| VIT_11s0118g00390.t01 | Wine grape | cytosol, nucleus, peroxisome | 39.89 | 39.89 |
| TraesCS7B01G041600.1 | Wheat | cytosol | 41.85 | 39.84 |
| VIT_11s0118g00370.t01 | Wine grape | plastid | 35.96 | 39.75 |
| Solyc10g086780.1.1 | Tomato | cytosol | 34.55 | 39.68 |
| Solyc07g045040.2.1 | Tomato | cytosol | 39.04 | 39.49 |
| Solyc10g076840.1.1 | Tomato | cytosol | 38.48 | 39.48 |
| KRH03607 | Soybean | cytosol, peroxisome, plastid | 38.76 | 39.32 |
| PGSC0003DMT400049392 | Potato | cytosol | 37.92 | 38.9 |
| TraesCS5B01G282100.1 | Wheat | golgi | 40.17 | 38.86 |
| CDY56860 | Canola | cytosol | 37.64 | 38.62 |
| Bra002298.1-P | Field mustard | cytosol | 37.64 | 38.51 |
| CDX92465 | Canola | cytosol | 37.64 | 38.4 |
| AT5G20550.1 | Thale cress | cytosol | 37.64 | 38.4 |
| Bra006559.1-P | Field mustard | cytosol | 37.64 | 38.29 |
| AT5G20400.1 | Thale cress | cytosol | 37.36 | 38.22 |
| CDY51847 | Canola | cytosol | 37.08 | 37.93 |
| CDY71604 | Canola | cytosol | 36.8 | 37.54 |
| VIT_09s0002g08090.t01 | Wine grape | cytosol, nucleus, peroxisome | 37.08 | 37.5 |
| AT5G54000.2 | Thale cress | cytosol | 36.24 | 36.96 |
| AT1G49390.1 | Thale cress | cytosol | 35.96 | 36.78 |
| KRH51466 | Soybean | peroxisome | 33.15 | 36.31 |
| KRH23597 | Soybean | cytosol, peroxisome | 34.27 | 35.88 |
| TraesCS3B01G497900.1 | Wheat | cytosol | 37.36 | 35.85 |
| CDY63243 | Canola | mitochondrion | 15.17 | 35.76 |
| VIT_11s0118g00360.t01 | Wine grape | cytosol | 39.89 | 35.68 |
| TraesCS4B01G374300.1 | Wheat | cytosol | 31.74 | 32.38 |
| TraesCS2B01G077500.1 | Wheat | cytoskeleton, cytosol, peroxisome | 32.87 | 32.23 |
| TraesCS4B01G374200.1 | Wheat | cytosol | 31.46 | 32.18 |
| TraesCS2B01G077600.1 | Wheat | cytosol | 33.15 | 32.07 |
| TraesCS3B01G440500.1 | Wheat | cytosol | 33.15 | 31.98 |
| TraesCS2B01G077800.1 | Wheat | cytosol | 31.74 | 30.87 |
| PGSC0003DMT400044918 | Potato | cytosol | 19.94 | 30.87 |
| TraesCS1B01G234500.1 | Wheat | plastid | 22.75 | 30.68 |
| TraesCS3B01G592000.1 | Wheat | cytosol | 32.58 | 30.61 |
| TraesCS4B01G335300.2 | Wheat | cytosol | 30.9 | 30.3 |
| TraesCS5B01G466400.1 | Wheat | cytosol | 28.09 | 28.25 |
| TraesCS4B01G374100.2 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 30.9 | 27.36 |
| TraesCS1B01G345200.1 | Wheat | cytosol | 26.69 | 26.39 |
| TraesCS3B01G520100.3 | Wheat | cytosol | 26.12 | 23.97 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G224900.1 | EnsemblPlantsGene:TraesCS5B01G224900 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF379 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | PRINTS:PR00682 | SUPFAM:SSF51197 | MapMan:50.1.13 | : | : |
Description
No Description!
Coordinates
chr5B:+:400521789..400523545
Molecular Weight (calculated)
40453.1 Da
IEP (calculated)
5.090
GRAVY (calculated)
-0.443
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASDESPMV RPTVQELASA GVEEPPRQYV LPEQDRHGDL LAADEFPEPI PLIDLSRLTD ADEAERLRAA LQTWGFFLAT NHGIEGSLMD AMMSVSREFF
101: RQPAEEKQKC SNLVDGNGKD YQVEGYGSDK VVSEDQVLNW SDRLHLRVEP EDERNFAKWP SHPESFRDVL KEYASRTKEI RDLVLRSIAK LLEIDEDYFV
201: NQISNKASGF ARFNYYPPCP RPDLVLGLRA HSDGGLLTIL FNDDTVGGLQ VQRDGRWYNV SAKPHTLLIN LADCLEIMNN GIFTSPIHRV VTNIKKDRLS
301: LAVFYAVDAE TMLEPAPGLL DDKRPPRYRK MLAKDFVAGL FEHFRQGKRF INTLKI
101: RQPAEEKQKC SNLVDGNGKD YQVEGYGSDK VVSEDQVLNW SDRLHLRVEP EDERNFAKWP SHPESFRDVL KEYASRTKEI RDLVLRSIAK LLEIDEDYFV
201: NQISNKASGF ARFNYYPPCP RPDLVLGLRA HSDGGLLTIL FNDDTVGGLQ VQRDGRWYNV SAKPHTLLIN LADCLEIMNN GIFTSPIHRV VTNIKKDRLS
301: LAVFYAVDAE TMLEPAPGLL DDKRPPRYRK MLAKDFVAGL FEHFRQGKRF INTLKI
001: MEKPKFKTVQ EVVAAGQGLP ERYLHAPTGE GESQPLNGAV PEMDIPAIDL SLLFSSSVDG QEEMKKLHSA LSTWGVVQVM NHGITEAFLD KIYKLTKQFF
101: ALPTEEKHKC ARETGNIQGY GNDMILSDNQ VLDWIDRLFL TTYPEDKRQL KFWPQVPVGF SETLDEYTMK QRVLIEKFFK AMARSLELEE NCFLEMYGEN
201: AVMNSRFNFF PPCPRPDKVI GIKPHADGSA ITLLLPDKDV EGLQFLKDGK WYKAPIVPDT ILITLGDQME IMSNGIYKSP VHRVVTNREK ERISVATFCV
301: PGLDKEIHPA DGLVTEARPR LYKTVTKYVD LHYKYYQQGR RTIEAALI
101: ALPTEEKHKC ARETGNIQGY GNDMILSDNQ VLDWIDRLFL TTYPEDKRQL KFWPQVPVGF SETLDEYTMK QRVLIEKFFK AMARSLELEE NCFLEMYGEN
201: AVMNSRFNFF PPCPRPDKVI GIKPHADGSA ITLLLPDKDV EGLQFLKDGK WYKAPIVPDT ILITLGDQME IMSNGIYKSP VHRVVTNREK ERISVATFCV
301: PGLDKEIHPA DGLVTEARPR LYKTVTKYVD LHYKYYQQGR RTIEAALI
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XIA5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.