Factsheet for Solyc06g068270.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

nucleus: 25464976

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400073345	Potato	cytosol	95.21	95.21
VIT_09s0002g08090.t01	Wine grape	cytosol, nucleus, peroxisome	66.2	66.76
KRH23597	Soybean	cytosol, peroxisome	54.65	57.06
TraesCS7D01G046300.1	Wheat	cytosol	18.87	51.54
Solyc10g086780.1.1	Tomato	cytosol	44.79	51.29
Solyc10g076840.1.1	Tomato	cytosol	47.61	48.7
TraesCS7D01G046400.1	Wheat	cytosol	22.82	47.65
Solyc07g045040.2.1	Tomato	cytosol	45.92	46.31
TraesCS6D01G359600.1	Wheat	cytosol	21.69	45.56
TraesCS7B01G042000.1	Wheat	cytosol	33.52	45.42
TraesCS7A01G140600.1	Wheat	cytosol	30.14	45.34
TraesCS7A01G140500.1	Wheat	cytosol	30.99	44.18
TraesCS7D01G142300.1	Wheat	cytosol	43.94	43.94
Zm00001d030548_P001	Maize	extracellular	43.66	43.91
HORVU7Hr1G009200.1	Barley	cytosol, peroxisome	23.1	43.85
TraesCS6D01G107100.1	Wheat	cytosol	42.82	43.68
TraesCS7B01G042400.2	Wheat	cytosol	43.66	43.66
TraesCS5B01G224800.1	Wheat	cytosol, nucleus, peroxisome	38.03	43.41
OQU75951	Sorghum	cytosol	42.25	43.35
TraesCS1D01G319800.1	Wheat	cytosol	23.38	43.01
TraesCS7A01G140300.2	Wheat	cytosol	43.66	42.94
HORVU7Hr1G028850.1	Barley	cytosol	43.1	42.86
TraesCS6B01G145400.1	Wheat	cytosol	41.97	42.82
TraesCS7A01G141100.1	Wheat	cytosol	44.23	42.78
HORVU1Hr1G066370.1	Barley	cytosol, peroxisome	39.72	42.6
HORVU7Hr1G028870.3	Barley	cytosol	42.82	42.58
TraesCS7A01G140900.1	Wheat	cytosol	42.82	42.58
KXG29110	Sorghum	cytosol	43.1	42.03
HORVU7Hr1G009310.3	Barley	cytosol	40.85	41.79
TraesCS7A01G141000.1	Wheat	cytosol	41.97	41.74
TraesCS7D01G141900.1	Wheat	cytosol	41.97	41.74
TraesCS6B01G351600.1	Wheat	cytosol	38.87	41.69
TraesCS7B01G042100.2	Wheat	cytosol	41.69	41.69
TraesCS5D01G565100.1	Wheat	cytosol	39.15	41.62
TraesCS7D01G142000.2	Wheat	cytosol	41.41	41.41
TraesCS6A01G320700.1	Wheat	cytosol	38.59	41.39
Os06t0176500-00	Rice	cytosol	32.39	41.37
Os06t0177700-00	Rice	cytosol	32.39	41.37
EER87956	Sorghum	peroxisome	42.25	41.32
TraesCS4A01G320100.1	Wheat	cytosol	38.87	41.32
Os02t0280700-01	Rice	cytosol	40.85	41.31
HORVU6Hr1G078640.9	Barley	cytosol, peroxisome	39.15	41.25
TraesCS1A01G320000.1	Wheat	cytosol	41.13	41.24
TraesCS7A01G001400.1	Wheat	cytosol	38.31	41.21
Zm00001d045145_P001	Maize	peroxisome	41.41	41.18
Os06t0176700-01	Rice	cytosol	40.56	41.14
Os06t0178500-01	Rice	cytosol	40.56	41.14
HORVU7Hr1G028840.5	Barley	cytosol	41.13	41.13
TraesCS7A01G051800.1	Wheat	cytosol	41.13	41.13
TraesCS4A01G496600.1	Wheat	cytosol	39.15	41.12
TraesCS6D01G359700.1	Wheat	cytosol	41.13	41.01
TraesCS1B01G332200.1	Wheat	cytosol	40.85	40.96
EER89306	Sorghum	cytosol	41.41	40.95
TraesCS7D01G142200.1	Wheat	cytosol	41.13	40.9
TraesCS4A01G439800.1	Wheat	cytosol	40.85	40.73
TraesCS7B01G042300.1	Wheat	cytosol	40.85	40.73
HORVU7Hr1G009140.4	Barley	cytosol, peroxisome	41.13	40.67
TraesCS7D01G141600.1	Wheat	cytosol, mitochondrion, peroxisome	40.85	40.62
TraesCS1D01G319700.1	Wheat	cytosol	41.41	40.61
TraesCS6B01G412700.1	Wheat	cytosol	40.56	40.56
TraesCS1B01G332300.1	Wheat	cytosol	39.44	40.46
HORVU6Hr1G088470.1	Barley	cytosol	40.56	40.34
HORVU6Hr1G088540.1	Barley	cytosol	40.56	40.34
HORVU7Hr1G009320.1	Barley	cytosol	30.7	40.22
TraesCS6D01G300600.1	Wheat	cytosol	37.46	40.18
TraesCS6B01G412800.1	Wheat	cytosol	40.28	40.17
TraesCS7D01G046100.1	Wheat	cytosol	40.28	40.17
KXG19442	Sorghum	cytosol	41.69	40.11
Os02t0320800-01	Rice	cytosol, peroxisome	34.08	40.07
HORVU6Hr1G088420.2	Barley	cytosol, peroxisome	40.28	40.06
TraesCS5A01G226400.1	Wheat	cytosol	40.85	40.06
TraesCS4A01G442500.1	Wheat	cytosol	40.0	40.0
TraesCS6D01G359300.1	Wheat	cytosol	40.0	40.0
TraesCSU01G102900.1	Wheat	cytosol	40.0	40.0
HORVU7Hr1G028880.10	Barley	plastid	43.66	39.95
TraesCS5B01G224900.1	Wheat	cytosol	40.0	39.89
TraesCS5D01G233700.1	Wheat	cytosol	40.0	39.89
TraesCS7A01G051200.1	Wheat	cytosol	40.0	39.89
EER88660	Sorghum	cytosol	41.13	39.78
TraesCS6A01G375200.1	Wheat	cytosol	40.0	39.78
TraesCS7A01G055900.1	Wheat	cytosol	39.72	39.72
HORVU6Hr1G088440.1	Barley	cytosol	39.72	39.61
TraesCS4A01G438300.1	Wheat	cytosol	39.72	39.61
TraesCSU01G115000.1	Wheat	cytosol	38.59	39.6
TraesCS7B01G041900.1	Wheat	cytosol	39.72	39.5
TraesCS5D01G233600.1	Wheat	cytosol, nucleus, peroxisome	39.15	39.49
TraesCS5D01G233800.1	Wheat	cytosol	34.08	39.41
HORVU5Hr1G075760.1	Barley	cytosol	40.85	39.4
HORVU7Hr1G010150.1	Barley	cytosol, endoplasmic reticulum, peroxisome	39.44	39.33
TraesCS5A01G283100.2	Wheat	cytosol	39.44	39.22
TraesCS7A01G140200.1	Wheat	cytosol	36.62	39.04
Zm00001d045141_P001	Maize	cytosol	30.7	38.93
HORVU7Hr1G021490.3	Barley	cytosol, peroxisome	34.37	38.61
TraesCS7D01G050500.1	Wheat	cytosol	38.59	38.59
TraesCS5B01G282100.1	Wheat	golgi	40.0	38.59
TraesCS5D01G289800.1	Wheat	cytosol, mitochondrion	40.0	38.59
TraesCS5D01G290600.1	Wheat	cytosol	40.0	38.59
TraesCS6D01G138200.1	Wheat	cytosol	40.0	38.59
Zm00001d037487_P001	Maize	cytosol	39.15	38.5
TraesCS5A01G282700.1	Wheat	golgi	39.15	37.77
TraesCS7B01G042500.1	Wheat	cytosol	38.59	37.74
TraesCS7D01G142400.1	Wheat	cytosol	38.87	37.3
Os06t0176300-00	Rice	cytosol	32.11	37.13
Os06t0177600-00	Rice	cytosol	32.11	37.13
TraesCS6A01G148800.2	Wheat	cytosol	38.59	37.13
TraesCS5D01G007400.1	Wheat	cytosol	37.46	36.94
TraesCS7A01G140100.1	Wheat	cytosol	27.89	36.94
EER87960	Sorghum	cytosol	18.31	36.93
TraesCS5D01G007300.1	Wheat	cytosol	20.0	36.79
TraesCS5D01G290400.1	Wheat	cytosol	38.87	36.7
TraesCS5A01G282800.1	Wheat	cytosol	35.49	36.63
HORVU7Hr1G028710.2	Barley	cytosol	38.31	36.36
TraesCS7B01G041600.1	Wheat	cytosol	38.31	36.36
TraesCS7B01G042200.3	Wheat	peroxisome	37.46	36.34
TraesCS7D01G142100.1	Wheat	cytosol, nucleus, peroxisome	42.82	35.85
TraesCS1A01G320100.1	Wheat	cytosol	40.85	35.71
HORVU5Hr1G124390.1	Barley	cytosol	30.42	35.64
TraesCS6A01G375100.1	Wheat	plastid	34.37	35.57
HORVU5Hr1G065620.7	Barley	plastid	36.34	35.15
EER87955	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	38.31	34.87
HORVU2Hr1G096500.1	Barley	cytosol	19.44	33.66
Solyc01g067620.2.1	Tomato	nucleus	34.37	33.61
Solyc08g062370.2.1	Tomato	cytoskeleton, cytosol, peroxisome	16.62	33.15
Solyc02g071440.2.1	Tomato	cytosol	32.11	32.57
Solyc02g071380.2.1	Tomato	cytosol, nucleus, peroxisome	32.68	32.31
Solyc02g071430.2.1	Tomato	cytosol	32.96	32.14
Solyc02g071470.2.1	Tomato	cytosol	32.39	31.94
Solyc02g071500.2.1	Tomato	cytosol	31.83	31.92
Solyc02g071490.2.1	Tomato	cytosol	32.11	31.58
Solyc02g071480.2.1	Tomato	cytosol, nucleus, peroxisome	30.14	31.29
Solyc02g071400.2.1	Tomato	cytosol	29.86	31.18
Solyc02g071360.2.1	Tomato	cytosol	31.83	31.13
Solyc02g071410.2.1	Tomato	cytosol	30.99	30.56
Solyc02g071450.2.1	Tomato	cytosol	30.7	30.28
HORVU0Hr1G019590.1	Barley	peroxisome	20.85	29.48
Os06t0178700-01	Rice	cytosol	10.42	10.45

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	UniProt:K4C802	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF185	SUPFAM:SSF51197	EnsemblPlantsGene:Solyc06g068270.2	EnsemblPlants:Solyc06g068270.2.1
UniParc:UPI0002766391	:	:	:	:	:

Description

No Description!

Coordinates

chr6:-:42305818..42307994

Molecular Weight (calculated)

40541.5 Da

IEP (calculated)

5.193

GRAVY (calculated)

-0.457

Length

355 amino acids

Sequence
(BLAST)

001: MAAYAVPPVE ELLSKRVQEM VLHGEEPLGP YICRSGEDVD EKQDIMDTSP IPTIDLNLLS CSATSDNKRE QELEKLGSAL SSWGCFQGIG HGISVSLLDK
101: IRQVSREFFK QPMEEKNKYA KSVVDFQGYG ADPIPEQGQS LDWSDRLFLE VFPEDGRQYN FWPQIPISFR EVLEDYSEKM KMVTEITSKA MAKSLKLEET
201: CFLEQFGKKA QLHARFNYYS PCQRPDLVLG LKPHADGTGY TIILQDEVGL QVLKDGKWYT VPRNPTALLV LMGDQMEIMS NGIFKSPVHR VVSNSERDRI
301: SIAMFYTPEL GKEIGPEDDL VNVDRPRIYK KVTDYAETHW KFYQRGMRAL HTAHI

Best Arabidopsis Sequence Match ( AT1G49390.1 )
(BLAST)

001: MEKPKFKTVQ EVVAAGQGLP ERYLHAPTGE GESQPLNGAV PEMDIPAIDL SLLFSSSVDG QEEMKKLHSA LSTWGVVQVM NHGITEAFLD KIYKLTKQFF
101: ALPTEEKHKC ARETGNIQGY GNDMILSDNQ VLDWIDRLFL TTYPEDKRQL KFWPQVPVGF SETLDEYTMK QRVLIEKFFK AMARSLELEE NCFLEMYGEN
201: AVMNSRFNFF PPCPRPDKVI GIKPHADGSA ITLLLPDKDV EGLQFLKDGK WYKAPIVPDT ILITLGDQME IMSNGIYKSP VHRVVTNREK ERISVATFCV
301: PGLDKEIHPA DGLVTEARPR LYKTVTKYVD LHYKYYQQGR RTIEAALI

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XIA5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.