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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • peroxisome 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, peroxisome
MultiLoc:peroxisome
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU6Hr1G088470.1 Barley cytosol 99.16 99.16
TraesCS6A01G375200.1 Wheat cytosol 90.2 90.2
TraesCS6B01G412800.1 Wheat cytosol 89.08 89.33
TraesCS6D01G359700.1 Wheat cytosol 87.11 87.36
HORVU6Hr1G088440.1 Barley cytosol 72.83 73.03
HORVU6Hr1G088420.2 Barley cytosol, peroxisome 71.99 71.99
HORVU7Hr1G021490.3 Barley cytosol, peroxisome 60.22 68.04
HORVU7Hr1G028840.5 Barley cytosol 67.23 67.61
HORVU7Hr1G028870.3 Barley cytosol 64.99 64.99
EER88660 Sorghum cytosol 60.5 58.86
HORVU6Hr1G078640.9 Barley cytosol, peroxisome 48.74 51.63
HORVU1Hr1G066370.1 Barley cytosol, peroxisome 44.82 48.34
HORVU7Hr1G009320.1 Barley cytosol 35.57 46.86
HORVU7Hr1G009140.4 Barley cytosol, peroxisome 47.06 46.8
HORVU7Hr1G028850.1 Barley cytosol 46.78 46.78
HORVU7Hr1G009200.1 Barley cytosol, peroxisome 24.37 46.52
Bra002299.1-P Field mustard cytosol 19.89 46.41
HORVU7Hr1G009310.3 Barley cytosol 45.1 46.4
Bra022690.1-P Field mustard cytoskeleton, cytosol, peroxisome 28.01 44.44
CDY28799 Canola cytoskeleton, cytosol, peroxisome 28.01 44.44
VIT_11s0118g00400.t01 Wine grape peroxisome 33.89 44.16
HORVU7Hr1G028880.10 Barley plastid 47.9 44.07
HORVU7Hr1G010150.1 Barley cytosol, endoplasmic reticulum, peroxisome 43.14 43.26
HORVU5Hr1G124390.1 Barley cytosol 36.41 42.9
KRH60778 Soybean cytosol, nucleus, peroxisome 42.3 42.42
PGSC0003DMT400049384 Potato cytosol 32.77 41.64
Solyc10g086780.1.1 Tomato cytosol 36.13 41.61
KRH03607 Soybean cytosol, peroxisome, plastid 40.9 41.6
PGSC0003DMT400049392 Potato cytosol 39.78 40.92
HORVU5Hr1G075760.1 Barley cytosol 42.02 40.76
Solyc06g068270.2.1 Tomato nucleus 40.34 40.56
PGSC0003DMT400073345 Potato cytosol 40.34 40.56
HORVU7Hr1G028710.2 Barley cytosol 42.3 40.37
Solyc10g076840.1.1 Tomato cytosol 39.22 40.35
Solyc07g045040.2.1 Tomato cytosol 39.78 40.34
Bra006559.1-P Field mustard cytosol 39.5 40.29
AT5G20400.1 Thale cress cytosol 39.22 40.23
CDY51847 Canola cytosol 39.22 40.23
VIT_11s0118g00390.t01 Wine grape cytosol, nucleus, peroxisome 40.06 40.17
VIT_09s0002g08090.t01 Wine grape cytosol, nucleus, peroxisome 39.5 40.06
CDY71604 Canola cytosol 38.94 39.83
CDY56860 Canola cytosol 38.66 39.77
Bra002298.1-P Field mustard cytosol 38.66 39.66
CDX92465 Canola cytosol 38.66 39.54
HORVU5Hr1G065620.7 Barley plastid 40.62 39.51
VIT_11s0118g00370.t01 Wine grape plastid 35.57 39.44
CDY63243 Canola mitochondrion 16.25 38.41
AT5G20550.1 Thale cress cytosol 37.53 38.4
AT1G49390.1 Thale cress cytosol 37.25 38.22
KRH51466 Soybean peroxisome 34.73 38.15
VIT_11s0118g00360.t01 Wine grape cytosol 42.02 37.69
AT5G54000.2 Thale cress cytosol 36.41 37.25
HORVU2Hr1G096500.1 Barley cytosol 21.29 37.07
KRH23597 Soybean cytosol, peroxisome 33.89 35.59
HORVU0Hr1G019590.1 Barley peroxisome 24.65 35.06
HORVU1Hr1G056210.5 Barley cytosol 33.89 34.08
PGSC0003DMT400044918 Potato cytosol 21.85 33.91
HORVU3Hr1G091210.2 Barley cytosol 33.89 32.53
HORVU2Hr1G010930.2 Barley cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 32.21 31.86
HORVU2Hr1G010950.3 Barley cytoskeleton, cytosol, peroxisome 31.37 31.02
HORVU4Hr1G080610.2 Barley cytosol 30.53 30.03
HORVU3Hr1G098580.2 Barley plastid 37.25 29.04
HORVU2Hr1G010960.1 Barley cytosol, mitochondrion, peroxisome 28.01 27.93
HORVU4Hr1G088340.42 Barley cytosol 28.57 27.42
HORVU3Hr1G104290.2 Barley plastid 28.29 23.71
HORVU1Hr1G077370.1 Barley plastid 26.05 22.04
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13UniProt:A0A287V3D9InterPro:DIOX_NGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114
EnsemblPlantsGene:HORVU6Hr1G088540EnsemblPlants:HORVU6Hr1G088540.1InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171PFAM:PF14226PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF114SUPFAM:SSF51197
UniParc:UPI000B4603F0SEG:seg::::
Description
No Description!
Coordinates
chrchr6H:+:566735695..566738896
Molecular Weight (calculated)
40580.0 Da
IEP (calculated)
4.818
GRAVY (calculated)
-0.234
Length
357 amino acids
Sequence
(BLAST)
001: MSSYGQQFKI REVPPIVQEL VAEGVQEPPG QYVVPEQDRP AAAFSEMPEP IPVVDLSRLS ADSPDELAKL RSALENWDLF LAVGHGMEPG FLAEAMKVMR
101: EFFKLPLEEK RKYSNIVDGK KMSWDGYGND LVVVENQVLD WNDRLSLLVE PESERAYALW PTQPPSFRDI LCEYTVRCRG VANLILQKLA KLLNLQEEYL
201: TTMLGEKSLT QATINYYPRC PKPDHVLGLK PHTDSSLITV NFVDVDVSGL QLQKNGIWYN VPIVANALVV NMGDLMEVVS NGFFKSLMHR VVTNAEKERL
301: SLVMFYVLDP EAEIEPVPEL VDDKRPRRYK NMKTKDYLAK FFDTYATGKL AIDSMKI
Best Arabidopsis Sequence Match ( AT1G17010.1 )
(BLAST)
001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.