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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • peroxisome 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT5G20400.1 Thale cress cytosol 83.62 83.62
CDY51847 Canola cytosol 79.6 79.6
Bra006559.1-P Field mustard cytosol 79.31 78.86
CDY71604 Canola cytosol 78.16 77.94
AT5G20550.1 Thale cress cytosol 77.87 77.65
AT5G54000.2 Thale cress cytosol 73.85 73.64
PGSC0003DMT400049384 Potato cytosol 45.11 55.87
Solyc10g086780.1.1 Tomato cytosol 47.7 53.55
PGSC0003DMT400049392 Potato cytosol 52.87 53.03
Solyc10g076840.1.1 Tomato cytosol 51.15 51.3
TraesCS7D01G046300.1 Wheat cytosol 18.39 49.23
VIT_11s0118g00360.t01 Wine grape cytosol 53.16 46.48
TraesCS7D01G046400.1 Wheat cytosol 22.7 46.47
TraesCS1D01G319800.1 Wheat cytosol 24.14 43.52
HORVU7Hr1G009200.1 Barley cytosol, peroxisome 23.28 43.32
TraesCS6D01G359600.1 Wheat cytosol 20.98 43.2
TraesCS7A01G140600.1 Wheat cytosol 29.02 42.8
OQU75951 Sorghum cytosol 42.24 42.49
TraesCS7B01G042100.2 Wheat cytosol 42.82 41.97
TraesCS7D01G142300.1 Wheat cytosol 42.82 41.97
TraesCS7A01G140500.1 Wheat cytosol 29.89 41.77
TraesCS5A01G283100.2 Wheat cytosol 42.82 41.74
TraesCS7A01G140900.1 Wheat cytosol 42.82 41.74
TraesCS7B01G042400.2 Wheat cytosol 42.53 41.69
TraesCS7B01G042000.1 Wheat cytosol 31.32 41.6
TraesCS5D01G290600.1 Wheat cytosol 43.97 41.58
HORVU7Hr1G028850.1 Barley cytosol 42.53 41.46
TraesCS7A01G141100.1 Wheat cytosol 43.68 41.42
HORVU5Hr1G075760.1 Barley cytosol 43.68 41.3
HORVU7Hr1G009310.3 Barley cytosol 41.09 41.21
TraesCS7D01G141600.1 Wheat cytosol, mitochondrion, peroxisome 42.24 41.18
TraesCS7D01G141900.1 Wheat cytosol 42.24 41.18
TraesCS5B01G224800.1 Wheat cytosol, nucleus, peroxisome 36.78 41.16
TraesCS7D01G142000.2 Wheat cytosol 41.95 41.13
Zm00001d030548_P001 Maize extracellular 41.67 41.08
TraesCS5B01G282100.1 Wheat golgi 43.39 41.03
TraesCS6D01G138200.1 Wheat cytosol 43.39 41.03
TraesCS7A01G140300.2 Wheat cytosol 42.53 41.0
EER87960 Sorghum cytosol 20.69 40.91
TraesCS5D01G289800.1 Wheat cytosol, mitochondrion 43.1 40.76
TraesCS7B01G041900.1 Wheat cytosol 41.67 40.62
TraesCS5A01G282700.1 Wheat golgi 42.82 40.49
Zm00001d045141_P001 Maize cytosol 32.47 40.36
HORVU7Hr1G028870.3 Barley cytosol 41.38 40.34
HORVU7Hr1G028840.5 Barley cytosol 41.09 40.28
TraesCS4A01G439800.1 Wheat cytosol 41.09 40.17
TraesCS5A01G282800.1 Wheat cytosol 39.66 40.12
TraesCS7B01G042300.1 Wheat cytosol 40.8 39.89
Os02t0280700-01 Rice cytosol 40.23 39.89
TraesCSU01G115000.1 Wheat cytosol 39.66 39.88
HORVU1Hr1G066370.1 Barley cytosol, peroxisome 37.93 39.88
EER88660 Sorghum cytosol 41.95 39.78
TraesCS6B01G412700.1 Wheat cytosol 40.52 39.72
EER87956 Sorghum peroxisome 41.38 39.67
TraesCS7A01G140200.1 Wheat cytosol 37.93 39.64
TraesCS4A01G442500.1 Wheat cytosol 40.23 39.44
TraesCS6A01G148800.2 Wheat cytosol 41.67 39.3
KXG29110 Sorghum cytosol 41.09 39.29
HORVU7Hr1G009140.4 Barley cytosol, peroxisome 40.52 39.28
TraesCS6A01G320700.1 Wheat cytosol 37.36 39.27
TraesCS6B01G351600.1 Wheat cytosol 37.36 39.27
TraesCS7D01G142200.1 Wheat cytosol 40.23 39.22
HORVU6Hr1G078640.9 Barley cytosol, peroxisome 37.93 39.17
TraesCS6D01G359300.1 Wheat cytosol 39.94 39.15
TraesCS7A01G051800.1 Wheat cytosol 39.94 39.15
TraesCS5D01G290400.1 Wheat cytosol 42.24 39.1
TraesCS7A01G051200.1 Wheat cytosol 39.94 39.04
TraesCS7A01G141000.1 Wheat cytosol 39.94 38.94
TraesCS4A01G320100.1 Wheat cytosol 37.36 38.92
TraesCS6D01G107100.1 Wheat cytosol 38.79 38.79
TraesCS1B01G332300.1 Wheat cytosol 38.51 38.73
TraesCS1A01G320000.1 Wheat cytosol 39.37 38.7
TraesCS1B01G332200.1 Wheat cytosol 39.37 38.7
TraesCS5D01G565100.1 Wheat cytosol 37.07 38.62
TraesCS7D01G050500.1 Wheat cytosol 39.37 38.59
HORVU7Hr1G010150.1 Barley cytosol, endoplasmic reticulum, peroxisome 39.37 38.48
TraesCS7D01G046100.1 Wheat cytosol 39.37 38.48
Os02t0320800-01 Rice cytosol, peroxisome 33.33 38.41
Zm00001d045145_P001 Maize peroxisome 39.37 38.38
Os06t0176700-01 Rice cytosol 38.51 38.29
Os06t0178500-01 Rice cytosol 38.51 38.29
TraesCS4A01G438300.1 Wheat cytosol 39.08 38.2
HORVU7Hr1G028880.10 Barley plastid 42.53 38.14
HORVU6Hr1G088420.2 Barley cytosol, peroxisome 39.08 38.1
TraesCS7A01G055900.1 Wheat cytosol 38.79 38.03
TraesCSU01G102900.1 Wheat cytosol 38.79 38.03
TraesCS6B01G145400.1 Wheat cytosol 37.93 37.93
HORVU6Hr1G088440.1 Barley cytosol 38.79 37.92
EER89306 Sorghum cytosol 39.08 37.88
TraesCS1D01G319700.1 Wheat cytosol 39.37 37.85
TraesCS6D01G359700.1 Wheat cytosol 38.51 37.64
TraesCS6D01G300600.1 Wheat cytosol 35.63 37.46
TraesCS5D01G007300.1 Wheat cytosol 20.69 37.31
HORVU6Hr1G088540.1 Barley cytosol 38.22 37.25
TraesCS6A01G375200.1 Wheat cytosol 38.22 37.25
TraesCS5D01G233600.1 Wheat cytosol, nucleus, peroxisome 37.64 37.22
TraesCS6B01G412800.1 Wheat cytosol 37.93 37.08
TraesCS4A01G496600.1 Wheat cytosol 35.92 36.98
HORVU6Hr1G088470.1 Barley cytosol 37.93 36.97
HORVU7Hr1G021490.3 Barley cytosol, peroxisome 33.33 36.71
TraesCS7A01G001400.1 Wheat cytosol 34.77 36.67
TraesCS7B01G041600.1 Wheat cytosol 39.37 36.63
HORVU7Hr1G009320.1 Barley cytosol 28.45 36.53
TraesCS5D01G233700.1 Wheat cytosol 37.36 36.52
Os06t0176300-00 Rice cytosol 32.18 36.48
Os06t0177600-00 Rice cytosol 32.18 36.48
TraesCS5A01G226400.1 Wheat cytosol 37.93 36.46
HORVU7Hr1G028710.2 Barley cytosol 39.08 36.36
Os06t0176500-00 Rice cytosol 29.02 36.33
Os06t0177700-00 Rice cytosol 29.02 36.33
Zm00001d037487_P001 Maize cytosol 37.64 36.29
TraesCS7B01G042500.1 Wheat cytosol 37.64 36.09
TraesCS7D01G142100.1 Wheat cytosol, nucleus, peroxisome 43.97 36.08
TraesCS5B01G224900.1 Wheat cytosol 36.78 35.96
TraesCS7A01G140100.1 Wheat cytosol 27.59 35.82
TraesCS7D01G142400.1 Wheat cytosol 37.93 35.68
TraesCS7B01G042200.3 Wheat peroxisome 37.36 35.52
KXG19442 Sorghum cytosol 37.64 35.5
TraesCS5D01G007400.1 Wheat cytosol 36.49 35.28
AT3G21420.1 Thale cress cytosol 36.78 35.16
AT4G25310.1 Thale cress cytosol 35.63 35.13
TraesCS6A01G375100.1 Wheat plastid 34.48 34.99
AT1G17020.1 Thale cress cytosol 35.92 34.92
TraesCS5D01G233800.1 Wheat cytosol 30.75 34.85
EER87955 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 38.79 34.62
HORVU5Hr1G124390.1 Barley cytosol 29.89 34.32
TraesCS1A01G320100.1 Wheat cytosol 39.94 34.24
AT1G78550.1 Thale cress cytosol, nucleus, peroxisome 34.77 33.99
AT4G25300.1 Thale cress cytosol 34.2 33.43
HORVU5Hr1G065620.7 Barley plastid 33.33 31.61
AT1G17010.1 Thale cress cytosol 32.76 31.58
HORVU0Hr1G019590.1 Barley peroxisome 21.84 30.28
HORVU2Hr1G096500.1 Barley cytosol 17.82 30.24
Os06t0178700-01 Rice cytosol 9.77 9.6
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13EntrezGene:841362UniProt:A0A178WD52ProteinID:AAD43161.1ProteinID:AEE32424.1
ProteinID:ANM59262.1ArrayExpress:AT1G49390EnsemblPlantsGene:AT1G49390RefSeq:AT1G49390TAIR:AT1G49390RefSeq:AT1G49390-TAIR-G
EnsemblPlants:AT1G49390.1TAIR:AT1G49390.1InterPro:DIOX_NGO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0051213GO:GO:0055114
InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443RefSeq:NP_001321634.1RefSeq:NP_175364.1ProteinID:OAP16156.1
InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226PO:PO:0007611PO:PO:0009005PO:PO:0009046
PO:PO:0020100PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF385UniProt:Q9XIA5SUPFAM:SSF51197
UniParc:UPI0000048360:::::
Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XIA5]
Coordinates
chr1:+:18279559..18281122
Molecular Weight (calculated)
39609.8 Da
IEP (calculated)
6.123
GRAVY (calculated)
-0.345
Length
348 amino acids
Sequence
(BLAST)
001: MEKPKFKTVQ EVVAAGQGLP ERYLHAPTGE GESQPLNGAV PEMDIPAIDL SLLFSSSVDG QEEMKKLHSA LSTWGVVQVM NHGITEAFLD KIYKLTKQFF
101: ALPTEEKHKC ARETGNIQGY GNDMILSDNQ VLDWIDRLFL TTYPEDKRQL KFWPQVPVGF SETLDEYTMK QRVLIEKFFK AMARSLELEE NCFLEMYGEN
201: AVMNSRFNFF PPCPRPDKVI GIKPHADGSA ITLLLPDKDV EGLQFLKDGK WYKAPIVPDT ILITLGDQME IMSNGIYKSP VHRVVTNREK ERISVATFCV
301: PGLDKEIHPA DGLVTEARPR LYKTVTKYVD LHYKYYQQGR RTIEAALI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.