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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • peroxisome 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT1G17020.1 Thale cress cytosol 76.73 77.37
CDY35138 Canola cytosol, nucleus, peroxisome 78.12 76.84
CDY40002 Canola cytosol 73.41 76.81
Bra026695.1-P Field mustard cytosol, nucleus, peroxisome 72.02 76.47
CDY21770 Canola cytosol, nucleus, peroxisome 67.59 76.25
Bra026008.1-P Field mustard cytosol, nucleus, peroxisome 72.58 75.94
AT4G25310.1 Thale cress cytosol 71.47 73.09
AT4G25300.1 Thale cress cytosol 71.75 72.75
AT1G78550.1 Thale cress cytosol, nucleus, peroxisome 61.5 62.36
KRH21858 Soybean cytosol 58.17 58.82
KRH13456 Soybean cytosol 57.06 58.36
KRH27437 Soybean cytosol 57.06 57.54
KRH27439 Soybean cytosol 56.79 57.1
VIT_15s0021g00960.t01 Wine grape cytosol 57.34 56.87
VIT_15s0021g00950.t01 Wine grape cytosol 54.57 56.61
VIT_10s0003g02450.t01 Wine grape cytosol 54.29 53.55
VIT_10s0003g02470.t01 Wine grape cytosol, mitochondrion, peroxisome, plastid 31.58 53.27
CDX81795 Canola cytosol, nucleus, peroxisome 74.79 50.37
GSMUA_AchrUn_... Banana cytosol, peroxisome 29.64 50.0
GSMUA_AchrUn_... Banana cytosol, peroxisome 39.06 49.65
TraesCS4D01G363100.1 Wheat cytosol 46.81 48.42
TraesCS4B01G374300.1 Wheat cytosol 46.26 47.85
Os01t0351800-01 Rice cytosol 45.15 47.38
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 45.98 46.89
TraesCS5A01G539900.1 Wheat cytosol 41.27 46.86
GSMUA_Achr11P... Banana cytosol 33.24 46.69
TraesCS4B01G374200.1 Wheat cytosol 44.88 46.55
TraesCS4D01G363200.1 Wheat cytosol 44.88 46.55
TraesCS5A01G539700.2 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole 44.04 46.22
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 45.43 46.2
TraesCS5A01G539800.1 Wheat cytosol 44.32 45.98
GSMUA_Achr11P... Banana cytosol 44.88 45.63
TraesCS3D01G013500.1 Wheat mitochondrion 21.33 45.56
GSMUA_Achr11P... Banana cytosol 44.6 45.22
GSMUA_Achr5P20940_001 Banana cytosol 44.88 45.13
Zm00001d048547_P001 Maize cytosol, peroxisome, plastid 44.32 44.82
GSMUA_Achr11P... Banana plastid 42.66 44.77
TraesCS3D01G529900.1 Wheat cytosol 43.49 44.73
TraesCS4D01G363000.1 Wheat cytosol 44.04 44.41
TraesCS4D01G363300.1 Wheat cytosol 41.83 44.28
Os10t0558750-01 Rice cytosol, nucleus, peroxisome 33.8 43.73
Os01t0352100-01 Rice cytosol 42.38 43.71
HORVU4Hr1G088340.42 Barley cytosol 44.88 43.55
HORVU1Hr1G056210.5 Barley cytosol 42.66 43.38
TraesCS3A01G524700.1 Wheat cytosol 42.11 43.3
EER95699 Sorghum cytosol 42.38 43.1
TraesCS3B01G440500.1 Wheat cytosol 44.04 43.09
TraesCS1D01G222800.1 Wheat cytosol 42.11 42.94
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 42.11 42.82
TraesCS3D01G403000.1 Wheat cytosol 43.49 42.55
Os10t0558900-01 Rice cytosol 32.69 42.45
TraesCS1B01G234500.1 Wheat plastid 31.02 42.42
TraesCS3A01G407900.1 Wheat cytosol 43.21 42.39
TraesCS1A01G221200.1 Wheat cytosol 41.55 42.37
TraesCS3A01G407800.1 Wheat cytosol 43.21 42.28
Zm00001d040597_P001 Maize cytosol 41.55 42.13
TraesCS3B01G592000.1 Wheat cytosol 44.04 41.95
HORVU2Hr1G010950.3 Barley cytoskeleton, cytosol, peroxisome 41.83 41.83
HORVU3Hr1G091210.2 Barley cytosol 42.94 41.67
TraesCS2D01G063800.1 Wheat cytoskeleton, cytosol, peroxisome 41.83 41.26
TraesCS2D01G063700.1 Wheat cytoskeleton, cytosol, peroxisome 41.55 41.21
EER91935 Sorghum cytosol 41.0 41.11
TraesCS2B01G077500.1 Wheat cytoskeleton, cytosol, peroxisome 41.27 41.05
Os10t0558200-00 Rice cytosol 39.61 40.86
Os10t0559500-01 Rice cytosol 40.72 40.83
TraesCSU01G044600.1 Wheat mitochondrion 23.27 40.78
EES08209 Sorghum cytosol 41.27 40.71
TraesCS2A01G065600.1 Wheat cytoskeleton, cytosol, peroxisome 41.27 40.71
TraesCS2B01G077800.1 Wheat cytosol 41.27 40.71
TraesCS2D01G064100.1 Wheat cytosol 41.27 40.71
EER91934 Sorghum cytosol 40.44 40.67
HORVU2Hr1G010930.2 Barley cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 40.44 40.44
KXG37089 Sorghum cytosol 40.17 40.39
Zm00001d012819_P001 Maize cytosol 40.72 40.38
Zm00001d041086_P001 Maize cytosol 39.89 40.34
Zm00001d029218_P001 Maize cytosol, peroxisome, plastid 34.35 40.26
TraesCS2D01G064000.1 Wheat cytosol 30.19 40.22
KXG34760 Sorghum cytosol 39.89 40.11
AT3G21420.1 Thale cress cytosol 40.44 40.11
Os10t0558700-02 Rice cytosol, nucleus, peroxisome 39.61 40.06
KXG37090 Sorghum cytosol 40.17 40.06
Os03t0856000-01 Rice cytosol 40.17 40.06
EES15940 Sorghum cytosol 39.61 39.94
TraesCS2A01G065800.1 Wheat cytosol 40.44 39.89
EES02838 Sorghum cytosol 38.78 39.66
TraesCS2A01G065500.1 Wheat cytosol 39.89 39.24
KXG32356 Sorghum plastid 37.67 39.19
TraesCS2D01G063600.1 Wheat cytosol 39.61 38.96
TraesCS2D01G063400.1 Wheat cytosol 39.61 38.86
HORVU2Hr1G010960.1 Barley cytosol, mitochondrion, peroxisome 38.5 38.83
TraesCS2A01G065400.1 Wheat cytosol 39.06 38.32
TraesCSU01G175100.1 Wheat cytosol 34.35 38.27
OQU92563 Sorghum cytosol 39.34 38.17
TraesCS4B01G374100.2 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 42.38 38.06
TraesCS2A01G065300.1 Wheat cytosol 38.78 38.04
TraesCS2D01G063500.1 Wheat cytosol 38.78 38.04
TraesCS2B01G077600.1 Wheat cytosol 38.5 37.77
HORVU4Hr1G080610.2 Barley cytosol 37.95 37.74
Os10t0558400-00 Rice cytosol, peroxisome 41.27 37.53
TraesCS4B01G335300.2 Wheat cytosol 37.67 37.47
EES02842 Sorghum cytosol 39.34 36.88
TraesCS3A01G477000.2 Wheat cytosol 35.73 36.65
EES12050 Sorghum cytosol 35.73 36.44
Zm00001d029636_P001 Maize extracellular 36.29 36.39
TraesCS4D01G330600.1 Wheat cytosol 36.29 35.99
Os09t0354100-00 Rice cytosol, peroxisome 28.53 35.89
TraesCS3D01G471500.2 Wheat cytosol 34.9 35.8
Os03t0439500-01 Rice cytosol 36.84 35.75
OQU92296 Sorghum cytosol 35.46 35.65
TraesCS1A01G331300.1 Wheat cytosol 34.07 34.84
TraesCS5D01G468100.1 Wheat cytosol 33.8 34.46
TraesCS1B01G345200.1 Wheat cytosol 34.35 34.44
TraesCS5B01G466400.1 Wheat cytosol 33.24 33.9
TraesCS5A01G457300.1 Wheat cytosol 32.41 33.72
AT5G20400.1 Thale cress cytosol 32.41 33.62
OQU92565 Sorghum mitochondrion, plastid 25.76 33.45
TraesCS3B01G520100.3 Wheat cytosol 35.46 32.99
AT1G49390.1 Thale cress cytosol 31.58 32.76
TraesCS1A01G331400.1 Wheat cytosol, peroxisome, plastid 34.9 32.47
AT5G54000.2 Thale cress cytosol 31.3 32.38
KXG19500 Sorghum cytosol, endoplasmic reticulum, peroxisome 39.89 32.29
AT5G20550.1 Thale cress cytosol 31.02 32.09
KXG39676 Sorghum cytosol, endoplasmic reticulum, peroxisome 34.9 31.5
TraesCS1D01G333300.1 Wheat cytosol 27.7 30.49
HORVU3Hr1G104290.2 Barley plastid 35.46 30.05
HORVU1Hr1G077370.1 Barley plastid 34.63 29.62
Os09t0353700-00 Rice cytosol, peroxisome, plastid 29.92 26.6
Zm00001d041087_P001 Maize cytosol 35.18 26.57
GSMUA_AchrUn_... Banana mitochondrion 37.4 21.88
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13EntrezGene:838271ProteinID:AEE29530.1ArrayExpress:AT1G17010EnsemblPlantsGene:AT1G17010
RefSeq:AT1G17010TAIR:AT1G17010RefSeq:AT1G17010-TAIR-GEnsemblPlants:AT1G17010.1TAIR:AT1G17010.1Unigene:At.41857
InterPro:DIOX_NUniProt:F4I629GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114InterPro:IPNS-likeInterPro:IPR005123
InterPro:IPR027443RefSeq:NP_173144.1InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226PRINTS:PR00682
PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF168SUPFAM:SSF51197UniParc:UPI0000048270SEG:seg
Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
Coordinates
chr1:+:5817567..5819352
Molecular Weight (calculated)
41402.5 Da
IEP (calculated)
6.532
GRAVY (calculated)
-0.258
Length
361 amino acids
Sequence
(BLAST)
001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.