Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_15s0021g00950.t01 | Wine grape | cytosol | 90.11 | 94.25 |
| VIT_10s0003g02470.t01 | Wine grape | cytosol, mitochondrion, peroxisome, plastid | 42.03 | 71.5 |
| VIT_10s0003g02450.t01 | Wine grape | cytosol | 69.23 | 68.85 |
| KRH13456 | Soybean | cytosol | 64.01 | 66.01 |
| KRH27437 | Soybean | cytosol | 63.46 | 64.53 |
| KRH21858 | Soybean | cytosol | 63.19 | 64.43 |
| CDX92691 | Canola | cytosol | 25.55 | 63.7 |
| CDY08973 | Canola | cytosol | 45.88 | 62.55 |
| KRH27439 | Soybean | cytosol | 61.26 | 62.12 |
| CDX94459 | Canola | cytosol | 42.03 | 61.94 |
| AT1G17020.1 | Thale cress | cytosol | 60.71 | 61.73 |
| Bra010470.1-P | Field mustard | cytosol | 45.05 | 61.42 |
| CDY24860 | Canola | cytosol | 45.05 | 61.42 |
| CDX81796 | Canola | cytosol | 59.07 | 60.06 |
| CDX89424 | Canola | cytosol | 47.8 | 60.0 |
| CDY52350 | Canola | cytosol | 43.96 | 59.93 |
| Bra026693.1-P | Field mustard | cytosol | 58.24 | 59.22 |
| VIT_10s0003g02380.t01 | Wine grape | cytosol | 37.09 | 59.21 |
| VIT_10s0003g02350.t01 | Wine grape | cytosol | 48.9 | 59.14 |
| VIT_10s0003g02360.t01 | Wine grape | cytosol | 49.18 | 58.88 |
| Bra026695.1-P | Field mustard | cytosol, nucleus, peroxisome | 54.95 | 58.82 |
| CDY21769 | Canola | cytosol | 58.24 | 58.24 |
| CDY21770 | Canola | cytosol, nucleus, peroxisome | 51.1 | 58.12 |
| CDY08970 | Canola | cytosol | 57.14 | 58.1 |
| CDY24858 | Canola | cytosol, peroxisome, plastid | 57.14 | 58.1 |
| Bra010472.1-P | Field mustard | cytosol | 57.14 | 58.1 |
| Bra026008.1-P | Field mustard | cytosol, nucleus, peroxisome | 54.95 | 57.97 |
| AT4G25310.1 | Thale cress | cytosol | 56.04 | 57.79 |
| VIT_10s0003g02260.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 29.67 | 57.75 |
| VIT_10s0003g02340.t01 | Wine grape | cytosol | 48.63 | 57.65 |
| AT4G25300.1 | Thale cress | cytosol | 56.32 | 57.58 |
| CDY40002 | Canola | cytosol | 54.4 | 57.39 |
| AT1G17010.1 | Thale cress | cytosol | 56.87 | 57.34 |
| VIT_10s0003g02400.t01 | Wine grape | cytosol | 48.35 | 57.33 |
| CDY35138 | Canola | cytosol, nucleus, peroxisome | 57.42 | 56.95 |
| VIT_10s0003g02420.t01 | Wine grape | cytosol | 21.98 | 56.74 |
| CDY11068 | Canola | cytosol | 54.95 | 56.5 |
| Bra019177.1-P | Field mustard | cytosol | 54.95 | 56.5 |
| CDX92689 | Canola | cytosol | 55.49 | 56.27 |
| VIT_10s0003g02280.t01 | Wine grape | cytosol | 47.25 | 56.03 |
| Bra010469.1-P | Field mustard | cytosol | 53.57 | 55.71 |
| VIT_10s0003g02330.t01 | Wine grape | plastid | 54.12 | 54.87 |
| VIT_10s0003g02290.t01 | Wine grape | plastid | 54.12 | 54.87 |
| VIT_10s0003g02390.t01 | Wine grape | cytosol | 54.12 | 54.42 |
| VIT_10s0003g02300.t01 | Wine grape | cytosol | 53.85 | 54.14 |
| VIT_02s0012g00440.t01 | Wine grape | extracellular | 18.96 | 52.67 |
| AT1G78550.1 | Thale cress | cytosol, nucleus, peroxisome | 51.37 | 52.53 |
| VIT_16s0022g00420.t01 | Wine grape | cytosol, nucleus, peroxisome, plastid | 52.75 | 52.32 |
| CDY52434 | Canola | cytosol, nucleus, peroxisome | 50.55 | 51.4 |
| Bra035046.1-P | Field mustard | cytosol | 50.27 | 51.12 |
| CDX88453 | Canola | cytosol, nucleus, peroxisome | 50.82 | 50.96 |
| VIT_16s0022g00430.t01 | Wine grape | plastid | 53.02 | 50.13 |
| VIT_02s0012g00450.t01 | Wine grape | cytosol, nucleus, peroxisome | 47.53 | 49.01 |
| CDX89425 | Canola | cytosol, peroxisome, plastid | 27.47 | 48.78 |
| VIT_02s0012g00320.t01 | Wine grape | cytosol | 36.54 | 48.72 |
| VIT_02s0012g00390.t01 | Wine grape | cytosol | 46.98 | 48.44 |
| VIT_02s0012g00400.t01 | Wine grape | cytosol, peroxisome, plastid | 45.33 | 47.69 |
| VIT_02s0012g00350.t01 | Wine grape | cytosol | 42.31 | 44.51 |
| VIT_02s0012g00360.t01 | Wine grape | cytosol | 40.93 | 44.35 |
| VIT_10s0003g02430.t01 | Wine grape | cytosol, nucleus, peroxisome | 58.24 | 43.09 |
| Bra013884.1-P | Field mustard | cytosol | 51.37 | 42.6 |
| VIT_13s0019g02010.t01 | Wine grape | cytosol | 42.86 | 42.51 |
| VIT_05s0020g01310.t01 | Wine grape | cytosol | 41.21 | 41.1 |
| VIT_02s0012g00410.t01 | Wine grape | plastid | 39.01 | 41.04 |
| CDX81795 | Canola | cytosol, nucleus, peroxisome | 57.97 | 39.37 |
| VIT_09s0002g08090.t01 | Wine grape | cytosol, nucleus, peroxisome | 37.91 | 39.2 |
| VIT_02s0012g00380.t01 | Wine grape | cytosol | 28.57 | 38.95 |
| VIT_11s0118g00400.t01 | Wine grape | peroxisome | 28.85 | 38.32 |
| VIT_11s0118g00390.t01 | Wine grape | cytosol, nucleus, peroxisome | 35.99 | 36.8 |
| VIT_11s0118g00370.t01 | Wine grape | plastid | 31.87 | 36.02 |
| VIT_11s0118g00360.t01 | Wine grape | cytosol | 39.01 | 35.68 |
| VIT_03s0091g01080.t01 | Wine grape | cytosol | 34.07 | 33.42 |
| VIT_10s0003g02320.t01 | Wine grape | cytosol, golgi, peroxisome | 38.46 | 31.39 |
| VIT_08s0007g00750.t01 | Wine grape | cytosol, nucleus, peroxisome | 40.66 | 21.11 |
Protein Annotations
| EntrezGene:100259799 | wikigene:100259799 | Gene3D:2.60.120.330 | MapMan:50.1.13 | ProteinID:CCB43919 | ProteinID:CCB43919.1 |
| InterPro:DIOX_N | UniProt:F6GVD6 | EMBL:FN594952 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPNS-like |
| InterPro:IPR005123 | InterPro:IPR027443 | EntrezGene:LOC100259799 | wikigene:LOC100259799 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 |
| PFAM:PF14226 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF168 | SUPFAM:SSF51197 | TIGR:TC61821 |
| UniParc:UPI00015C955E | ArrayExpress:VIT_15s0021g00960 | EnsemblPlantsGene:VIT_15s0021g00960 | EnsemblPlants:VIT_15s0021g00960.t01 | unigene:Vvi.18990 | RefSeq:XP_002268288 |
| RefSeq:XP_002268288.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr15:-:10879805..10887376
Molecular Weight (calculated)
41348.2 Da
IEP (calculated)
5.832
GRAVY (calculated)
-0.151
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MESGLSSLGS SLLVPCVQEL VKEPLTAVPH RYVRPEQDSP VLSNATDSMP HVPIIDLHRL LSADFTHSEL EKLHRACQEW GFFQLINHGV SSSLVEKVKA
101: ETQEFFNLPL EEKKKFWQKP GEVEGFGQAF VVSEEQKLDW GDIFFMSTLP THFRKPHLFP KLPLPFRDTL EVYVVEMRNL ALTMLSFMEK ALKIEVNEMR
201: KLFEQGLQAM RMNYYPPCPK PEQVIGLTPH SDSVGLTILL QVNEVEGLQI RKDGMWIPIT PLPNAFIVNI GDILEIFSNG IYKSIEHRAV VNSVKERLSI
301: ATFYNPQMDA EIGPVPSLIT PEFPALFRRV GVADYVKKLF SRELGGKSYL EALRIDGKEE GQNI
101: ETQEFFNLPL EEKKKFWQKP GEVEGFGQAF VVSEEQKLDW GDIFFMSTLP THFRKPHLFP KLPLPFRDTL EVYVVEMRNL ALTMLSFMEK ALKIEVNEMR
201: KLFEQGLQAM RMNYYPPCPK PEQVIGLTPH SDSVGLTILL QVNEVEGLQI RKDGMWIPIT PLPNAFIVNI GDILEIFSNG IYKSIEHRAV VNSVKERLSI
301: ATFYNPQMDA EIGPVPSLIT PEFPALFRRV GVADYVKKLF SRELGGKSYL EALRIDGKEE GQNI
001: MEAKGAAQWS SILVPSVQEM VKEKTITTVP PRYVRSDQDK TEVDDDFDVK IEIPIIDMKR LCSSTTMDSE VEKLDFACKE WGFFQLVNHG IDSSFLDKVK
101: SEIQDFFNLP MEEKKKFWQR PDEIEGFGQA FVVSEDQKLD WADLFFHTVQ PVELRKPHLF PKLPLPFRDT LEMYSSEVQS VAKILIAKMA RALEIKPEEL
201: EKLFDDVDSV QSMRMNYYPP CPQPDQVIGL TPHSDSVGLT VLMQVNDVEG LQIKKDGKWV PVKPLPNAFI VNIGDVLEII TNGTYRSIEH RGVVNSEKER
301: LSIATFHNVG MYKEVGPAKS LVERQKVARF KRLTMKEYND GLFSRTLDGK AYLDALRI
101: SEIQDFFNLP MEEKKKFWQR PDEIEGFGQA FVVSEDQKLD WADLFFHTVQ PVELRKPHLF PKLPLPFRDT LEMYSSEVQS VAKILIAKMA RALEIKPEEL
201: EKLFDDVDSV QSMRMNYYPP CPQPDQVIGL TPHSDSVGLT VLMQVNDVEG LQIKKDGKWV PVKPLPNAFI VNIGDVLEII TNGTYRSIEH RGVVNSEKER
301: LSIATFHNVG MYKEVGPAKS LVERQKVARF KRLTMKEYND GLFSRTLDGK AYLDALRI
Arabidopsis Description
SRG1Protein SRG1 [Source:UniProtKB/Swiss-Prot;Acc:Q39224]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.