Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89424 | Canola | cytosol | 95.55 | 81.38 |
| CDX92691 | Canola | cytosol | 46.15 | 78.08 |
| CDX89425 | Canola | cytosol, peroxisome, plastid | 59.11 | 71.22 |
| CDY24860 | Canola | cytosol | 75.71 | 70.04 |
| CDY08973 | Canola | cytosol | 75.71 | 70.04 |
| CDY52350 | Canola | cytosol | 75.71 | 70.04 |
| CDY11068 | Canola | cytosol | 81.78 | 57.06 |
| AT4G25310.1 | Thale cress | cytosol | 78.95 | 55.24 |
| VIT_10s0003g02470.t01 | Wine grape | cytosol, mitochondrion, peroxisome, plastid | 47.37 | 54.67 |
| CDX92689 | Canola | cytosol | 78.14 | 53.76 |
| AT4G25300.1 | Thale cress | cytosol | 76.92 | 53.37 |
| CDY08970 | Canola | cytosol | 76.52 | 52.79 |
| CDY24858 | Canola | cytosol, peroxisome, plastid | 75.3 | 51.96 |
| CDY40002 | Canola | cytosol | 70.85 | 50.72 |
| CDX81796 | Canola | cytosol | 72.47 | 50.0 |
| CDY21770 | Canola | cytosol, nucleus, peroxisome | 63.56 | 49.06 |
| CDY21769 | Canola | cytosol | 71.26 | 48.35 |
| CDY35138 | Canola | cytosol, nucleus, peroxisome | 69.23 | 46.59 |
| CDY52434 | Canola | cytosol, nucleus, peroxisome | 63.56 | 43.85 |
| VIT_15s0021g00950.t01 | Wine grape | cytosol | 61.54 | 43.68 |
| KRH27439 | Soybean | cytosol | 61.13 | 42.06 |
| VIT_15s0021g00960.t01 | Wine grape | cytosol | 61.94 | 42.03 |
| CDX88453 | Canola | cytosol, nucleus, peroxisome | 61.13 | 41.6 |
| KRH21858 | Soybean | cytosol | 59.51 | 41.18 |
| KRH27437 | Soybean | cytosol | 58.7 | 40.5 |
| KRH13456 | Soybean | cytosol | 57.09 | 39.94 |
| CDY69556 | Canola | cytosol | 6.07 | 39.47 |
| VIT_10s0003g02450.t01 | Wine grape | cytosol | 57.89 | 39.07 |
| CDY28799 | Canola | cytoskeleton, cytosol, peroxisome | 34.01 | 37.33 |
| CDY63243 | Canola | mitochondrion | 21.86 | 35.76 |
| CDX81795 | Canola | cytosol, nucleus, peroxisome | 70.85 | 32.65 |
| CDY37294 | Canola | cytosol, nucleus, peroxisome | 45.34 | 30.85 |
| CDY44337 | Canola | cytosol | 44.94 | 30.58 |
| CDY38615 | Canola | cytosol | 44.94 | 30.58 |
| CDY19267 | Canola | cytosol | 44.94 | 30.58 |
| CDX92465 | Canola | cytosol | 36.44 | 25.79 |
| CDY56860 | Canola | cytosol | 36.03 | 25.65 |
| CDY51847 | Canola | cytosol | 34.82 | 24.71 |
| CDY71604 | Canola | cytosol | 34.41 | 24.36 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | GO:A0A078E1E0 | EnsemblPlants:CDX94459 | ProteinID:CDX94459 | ProteinID:CDX94459.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 |
| EnsemblPlantsGene:GSBRNA2T00157629001 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 |
| PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF168 | SUPFAM:SSF51197 | UniParc:UPI0004EEDD34 | SEG:seg |
Description
BnaC01g17250D
Coordinates
chrLK031881:-:1359375..1360445
Molecular Weight (calculated)
28096.1 Da
IEP (calculated)
8.979
GRAVY (calculated)
-0.438
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEKRKLRQR PGEIEGFGQA FVVSEEQKLD WGDMFLLTMQ PVHLRKPHLF PKLPPPFRDA LEKYSSEVKS IAKILLANMA RALKVKPDEM EYLFGDDLGQ
101: KLRMNYYPPC PEPNKVYGLT PHSDATGLTI LLQVNEVEGL QIKKNGKWVS VKPLPNAFVV NIGDMLEMIT NGAYKSIEHR GVVNSEKERL SMATFHNTGT
201: GKEFGPLRSL VERQNGACFR TVTPEEYFKG LASRELDGKA FLDVWRI
101: KLRMNYYPPC PEPNKVYGLT PHSDATGLTI LLQVNEVEGL QIKKNGKWVS VKPLPNAFVV NIGDMLEMIT NGAYKSIEHR GVVNSEKERL SMATFHNTGT
201: GKEFGPLRSL VERQNGACFR TVTPEEYFKG LASRELDGKA FLDVWRI
001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.