Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11068 | Canola | cytosol | 90.81 | 92.09 |
| CDX92691 | Canola | cytosol | 35.65 | 87.67 |
| CDX94459 | Canola | cytosol | 53.76 | 78.14 |
| CDY24860 | Canola | cytosol | 57.1 | 76.78 |
| CDY08973 | Canola | cytosol | 56.82 | 76.4 |
| CDX89424 | Canola | cytosol | 61.28 | 75.86 |
| CDY52350 | Canola | cytosol | 56.27 | 75.66 |
| AT4G25300.1 | Thale cress | cytosol | 73.82 | 74.44 |
| CDY08970 | Canola | cytosol | 73.82 | 74.02 |
| AT4G25310.1 | Thale cress | cytosol | 72.7 | 73.94 |
| CDY24858 | Canola | cytosol, peroxisome, plastid | 73.26 | 73.46 |
| CDX81796 | Canola | cytosol | 72.14 | 72.35 |
| CDY21769 | Canola | cytosol | 72.14 | 71.15 |
| CDY21770 | Canola | cytosol, nucleus, peroxisome | 62.4 | 70.0 |
| CDY35138 | Canola | cytosol, nucleus, peroxisome | 69.08 | 67.57 |
| CDY40002 | Canola | cytosol | 64.9 | 67.54 |
| CDX89425 | Canola | cytosol, peroxisome, plastid | 36.21 | 63.41 |
| CDY52434 | Canola | cytosol, nucleus, peroxisome | 59.89 | 60.06 |
| CDX88453 | Canola | cytosol, nucleus, peroxisome | 58.77 | 58.13 |
| KRH21858 | Soybean | cytosol | 56.55 | 56.86 |
| VIT_15s0021g00950.t01 | Wine grape | cytosol | 54.6 | 56.32 |
| KRH27437 | Soybean | cytosol | 55.71 | 55.87 |
| KRH27439 | Soybean | cytosol | 55.71 | 55.71 |
| KRH13456 | Soybean | cytosol | 54.6 | 55.52 |
| VIT_15s0021g00960.t01 | Wine grape | cytosol | 56.27 | 55.49 |
| VIT_10s0003g02450.t01 | Wine grape | cytosol | 52.92 | 51.91 |
| VIT_10s0003g02470.t01 | Wine grape | cytosol, mitochondrion, peroxisome, plastid | 30.08 | 50.47 |
| CDX81795 | Canola | cytosol, nucleus, peroxisome | 66.85 | 44.78 |
| CDY44337 | Canola | cytosol | 39.0 | 38.57 |
| CDY38615 | Canola | cytosol | 38.72 | 38.29 |
| CDY19267 | Canola | cytosol | 38.72 | 38.29 |
| CDY37294 | Canola | cytosol, nucleus, peroxisome | 38.44 | 38.02 |
| CDY28799 | Canola | cytoskeleton, cytosol, peroxisome | 22.28 | 35.56 |
| CDY63243 | Canola | mitochondrion | 14.48 | 34.44 |
| CDY71604 | Canola | cytosol | 33.43 | 34.38 |
| CDY51847 | Canola | cytosol | 33.15 | 34.2 |
| CDX92465 | Canola | cytosol | 33.15 | 34.1 |
| CDY56860 | Canola | cytosol | 32.59 | 33.72 |
| CDY69556 | Canola | cytosol | 2.51 | 23.68 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | GO:A0A078DW71 | EnsemblPlants:CDX92689 | ProteinID:CDX92689 | ProteinID:CDX92689.1 |
| InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00154502001 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase |
| PFAM:PF03171 | PFAM:PF14226 | PRINTS:PR00682 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF168 |
| SUPFAM:SSF51197 | UniParc:UPI0004EE2053 | SEG:seg | : | : | : |
Description
BnaC07g39470D
Coordinates
chrLK031873:+:332719..334011
Molecular Weight (calculated)
41133.9 Da
IEP (calculated)
5.020
GRAVY (calculated)
-0.277
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEAKGANQY NSIIVPSVQE MVKEKMIKTV PQRYIRSDLD KTEITDDCGP RTEIPIIDLN RLCSSTSMAS EIDKLDLACK EWGFFQLVNH GIDSKFLDKV
101: KSEIQDHFNL PMEEKKKLWQ QPGEIEGFGQ SFVVSEEQKL DWSDMFPSKM CFPPPQLLFF KSWLCFFFRD TLERYSTEVK SIAKILLANM ARALEIKPEE
201: ILEELFDDEL GQKMRMNYYP PCPEPDQVIG VTPHSDATGL TILLQVNEVE GLQIKKDGKW VPVKPLPNAF IVNIGDMLEI ITNGTYKSIE HRGVVNSEKE
301: RLSVAAFHNM GMGKVVGPLR SLVERQKGAL FRSVTIEEFL KVLFSRELDG KAFLDVWRI
101: KSEIQDHFNL PMEEKKKLWQ QPGEIEGFGQ SFVVSEEQKL DWSDMFPSKM CFPPPQLLFF KSWLCFFFRD TLERYSTEVK SIAKILLANM ARALEIKPEE
201: ILEELFDDEL GQKMRMNYYP PCPEPDQVIG VTPHSDATGL TILLQVNEVE GLQIKKDGKW VPVKPLPNAF IVNIGDMLEI ITNGTYKSIE HRGVVNSEKE
301: RLSVAAFHNM GMGKVVGPLR SLVERQKGAL FRSVTIEEFL KVLFSRELDG KAFLDVWRI
001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.