Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40002 | Canola | cytosol | 86.38 | 91.88 |
| CDY21770 | Canola | cytosol, nucleus, peroxisome | 73.84 | 84.69 |
| AT1G17010.1 | Thale cress | cytosol | 76.84 | 78.12 |
| CDX81796 | Canola | cytosol | 75.2 | 77.09 |
| CDY21769 | Canola | cytosol | 74.11 | 74.73 |
| CDX92691 | Canola | cytosol | 29.43 | 73.97 |
| CDY52350 | Canola | cytosol | 51.5 | 70.79 |
| CDY24860 | Canola | cytosol | 51.5 | 70.79 |
| CDY08970 | Canola | cytosol | 68.66 | 70.39 |
| CDY08973 | Canola | cytosol | 50.68 | 69.66 |
| CDX94459 | Canola | cytosol | 46.59 | 69.23 |
| CDY11068 | Canola | cytosol | 66.76 | 69.21 |
| CDX92689 | Canola | cytosol | 67.57 | 69.08 |
| CDY24858 | Canola | cytosol, peroxisome, plastid | 67.03 | 68.72 |
| CDX89424 | Canola | cytosol | 52.86 | 66.9 |
| CDY52434 | Canola | cytosol, nucleus, peroxisome | 59.95 | 61.45 |
| CDX88453 | Canola | cytosol, nucleus, peroxisome | 59.67 | 60.33 |
| KRH21858 | Soybean | cytosol | 58.58 | 60.22 |
| KRH13456 | Soybean | cytosol | 56.95 | 59.21 |
| KRH27437 | Soybean | cytosol | 56.13 | 57.54 |
| VIT_15s0021g00960.t01 | Wine grape | cytosol | 56.95 | 57.42 |
| KRH27439 | Soybean | cytosol | 56.13 | 57.38 |
| VIT_15s0021g00950.t01 | Wine grape | cytosol | 53.95 | 56.9 |
| CDX81795 | Canola | cytosol, nucleus, peroxisome | 82.29 | 56.34 |
| CDX89425 | Canola | cytosol, peroxisome, plastid | 31.06 | 55.61 |
| VIT_10s0003g02450.t01 | Wine grape | cytosol | 54.5 | 54.64 |
| VIT_10s0003g02470.t01 | Wine grape | cytosol, mitochondrion, peroxisome, plastid | 31.61 | 54.21 |
| CDY37294 | Canola | cytosol, nucleus, peroxisome | 38.96 | 39.39 |
| CDY19267 | Canola | cytosol | 38.96 | 39.39 |
| CDY44337 | Canola | cytosol | 38.69 | 39.12 |
| CDY28799 | Canola | cytoskeleton, cytosol, peroxisome | 23.98 | 39.11 |
| CDY38615 | Canola | cytosol | 38.42 | 38.84 |
| CDY63243 | Canola | mitochondrion | 15.8 | 38.41 |
| CDY69556 | Canola | cytosol | 3.81 | 36.84 |
| CDY51847 | Canola | cytosol | 34.33 | 36.21 |
| CDY71604 | Canola | cytosol | 34.33 | 36.1 |
| CDX92465 | Canola | cytosol | 34.33 | 36.1 |
| CDY56860 | Canola | cytosol | 34.06 | 36.02 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | GO:A0A078HEA7 | UniProt:A0A078HEA7 | EnsemblPlants:CDY35138 | ProteinID:CDY35138 |
| ProteinID:CDY35138.1 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00058023001 | InterPro:IPNS-like |
| InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PRINTS:PR00682 |
| PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF168 | SUPFAM:SSF51197 | UniParc:UPI0004EE110F | SEG:seg |
Description
BnaA06g11480DBnaA06g11480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HEA7]
Coordinates
chrLK032346:+:399845..401598
Molecular Weight (calculated)
42044.3 Da
IEP (calculated)
6.193
GRAVY (calculated)
-0.208
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAKGETQWS SIIVPSVQEM VKEKMITTVP PRYVQPDQDK SGVTDDSGLI PNIPIIDMKR LCSSTAMDAD SEVQKLDLAC KEFGFFQAKS LNFFLVNHGI
101: DPCFLDQTKL EIHDFFNLPM EEKKMFWQQP DEMEGFGQAF VLSEDQKLDW ADIFFFIIQP AQLRKPHLFP KLPLPFRDTL EMYSAKVKSI AKILIAKMGE
201: VLKIKPEEIE ERFADDMFQS MRMNYYPPCP EPHQVIGLTP HSDAVALTIL LQVNEVEGLQ IKKDGKWVFV KPLPNAFIVN VGDVLEIITN GIYKSIEHRV
301: VVNLEKERLS FATFHNPGLN KEISPAKSLV EKQKKCAKFK SLITKDYLKG LFSRELYGKA YLDAMRI
101: DPCFLDQTKL EIHDFFNLPM EEKKMFWQQP DEMEGFGQAF VLSEDQKLDW ADIFFFIIQP AQLRKPHLFP KLPLPFRDTL EMYSAKVKSI AKILIAKMGE
201: VLKIKPEEIE ERFADDMFQS MRMNYYPPCP EPHQVIGLTP HSDAVALTIL LQVNEVEGLQ IKKDGKWVFV KPLPNAFIVN VGDVLEIITN GIYKSIEHRV
301: VVNLEKERLS FATFHNPGLN KEISPAKSLV EKQKKCAKFK SLITKDYLKG LFSRELYGKA YLDAMRI
001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.