CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92691	Canola	cytosol	55.61	78.08
CDX94459	Canola	cytosol	71.22	59.11
CDX89424	Canola	cytosol	71.71	50.69
CDY24860	Canola	cytosol	58.05	44.57
CDY08973	Canola	cytosol	57.56	44.19
CDY52350	Canola	cytosol	57.07	43.82
VIT_10s0003g02470.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	43.41	41.59
CDX92689	Canola	cytosol	63.41	36.21
CDY11068	Canola	cytosol	62.44	36.16
AT4G25310.1	Thale cress	cytosol	61.95	35.98
CDY21770	Canola	cytosol, nucleus, peroxisome	54.15	34.69
CDY08970	Canola	cytosol	60.49	34.64
CDY24858	Canola	cytosol, peroxisome, plastid	59.51	34.08
AT4G25300.1	Thale cress	cytosol	59.02	33.99
CDY40002	Canola	cytosol	55.12	32.75
CDY63243	Canola	mitochondrion	23.9	32.45
CDX81796	Canola	cytosol	55.12	31.56
CDY35138	Canola	cytosol, nucleus, peroxisome	55.61	31.06
CDY21769	Canola	cytosol	54.15	30.49
VIT_15s0021g00950.t01	Wine grape	cytosol	48.78	28.74
CDY28799	Canola	cytoskeleton, cytosol, peroxisome	30.24	27.56
VIT_15s0021g00960.t01	Wine grape	cytosol	48.78	27.47
KRH27439	Soybean	cytosol	46.34	26.46
KRH21858	Soybean	cytosol	45.85	26.33
CDY52434	Canola	cytosol, nucleus, peroxisome	45.85	26.26
KRH13456	Soybean	cytosol	44.88	26.06
VIT_10s0003g02450.t01	Wine grape	cytosol	45.85	25.68
CDX88453	Canola	cytosol, nucleus, peroxisome	45.37	25.62
KRH27437	Soybean	cytosol	44.39	25.42
CDX81795	Canola	cytosol, nucleus, peroxisome	55.12	21.08
CDY37294	Canola	cytosol, nucleus, peroxisome	35.61	20.11
CDY19267	Canola	cytosol	35.12	19.83
CDY44337	Canola	cytosol	34.63	19.56
CDY38615	Canola	cytosol	34.63	19.56
CDY51847	Canola	cytosol	29.27	17.24
CDY56860	Canola	cytosol	28.78	17.0
CDY71604	Canola	cytosol	28.78	16.91
CDX92465	Canola	cytosol	28.78	16.91
CDY69556	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDX89425	EnsemblPlantsGene:GSBRNA2T00149673001	Gene3D:2.60.120.330	GO:A0A078DJQ5	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF168	PFAM:PF03171	PFscan:PS51471
ProteinID:CDX89425	ProteinID:CDX89425.1	SUPFAM:SSF51197	UniParc:UPI0004EE5D9A	MapMan:50.1.13	:

Description

BnaA01g14680D

Coordinates

chrLK031858:-:1558659..1559359

Molecular Weight (calculated)

23051.9 Da

IEP (calculated)

8.202

GRAVY (calculated)

-0.195

Length

205 amino acids

Sequence
(BLAST)

001: MEYVFSDDLG QKLRMNYYPP CPEPDQVIGL TPHSDATGLT ILLQVNEVEG LQIKKNGKWV SVKPLPNAFV VNIGDMLEMI TNGAYKSIEH RGVVNSEKER
101: LSMATFHNTG TGKEIGPLRS LVERQKGACF RTVTPEEYFK GLASRELDGK AFLMFGESKG QQCCQINFVF SDRSWCSRCI LCFSFVKSLS MLRQSRSSCI
201: VQSFI

Best Arabidopsis Sequence Match ( AT1G17010.1 )
(BLAST)

001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.