Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21769 | Canola | cytosol | 95.53 | 93.96 |
| AT1G17020.1 | Thale cress | cytosol | 87.15 | 87.15 |
| CDY52350 | Canola | cytosol | 56.15 | 75.28 |
| CDY35138 | Canola | cytosol, nucleus, peroxisome | 77.09 | 75.2 |
| CDY24860 | Canola | cytosol | 55.87 | 74.91 |
| CDY21770 | Canola | cytosol, nucleus, peroxisome | 66.76 | 74.69 |
| CDY08973 | Canola | cytosol | 55.59 | 74.53 |
| CDY40002 | Canola | cytosol | 71.23 | 73.91 |
| CDY08970 | Canola | cytosol | 73.74 | 73.74 |
| CDY24858 | Canola | cytosol, peroxisome, plastid | 72.91 | 72.91 |
| CDX92691 | Canola | cytosol | 29.61 | 72.6 |
| CDX94459 | Canola | cytosol | 50.0 | 72.47 |
| CDX92689 | Canola | cytosol | 72.35 | 72.14 |
| CDY11068 | Canola | cytosol | 70.67 | 71.47 |
| CDX89424 | Canola | cytosol | 56.15 | 69.31 |
| CDY52434 | Canola | cytosol, nucleus, peroxisome | 62.57 | 62.57 |
| CDX88453 | Canola | cytosol, nucleus, peroxisome | 61.73 | 60.88 |
| KRH21858 | Soybean | cytosol | 59.78 | 59.94 |
| KRH27439 | Soybean | cytosol | 59.78 | 59.61 |
| VIT_15s0021g00960.t01 | Wine grape | cytosol | 60.06 | 59.07 |
| VIT_15s0021g00950.t01 | Wine grape | cytosol | 56.98 | 58.62 |
| KRH13456 | Soybean | cytosol | 57.54 | 58.36 |
| KRH27437 | Soybean | cytosol | 58.1 | 58.1 |
| VIT_10s0003g02470.t01 | Wine grape | cytosol, mitochondrion, peroxisome, plastid | 33.8 | 56.54 |
| VIT_10s0003g02450.t01 | Wine grape | cytosol | 57.26 | 56.01 |
| CDX89425 | Canola | cytosol, peroxisome, plastid | 31.56 | 55.12 |
| CDX81795 | Canola | cytosol, nucleus, peroxisome | 74.58 | 49.81 |
| CDY44337 | Canola | cytosol | 42.46 | 41.87 |
| CDY19267 | Canola | cytosol | 42.18 | 41.6 |
| CDY28799 | Canola | cytoskeleton, cytosol, peroxisome | 25.98 | 41.33 |
| CDY38615 | Canola | cytosol | 41.9 | 41.32 |
| CDY37294 | Canola | cytosol, nucleus, peroxisome | 41.9 | 41.32 |
| CDY69556 | Canola | cytosol | 4.19 | 39.47 |
| CDX92465 | Canola | cytosol | 37.15 | 38.11 |
| CDY56860 | Canola | cytosol | 36.59 | 37.75 |
| CDY51847 | Canola | cytosol | 36.03 | 37.07 |
| CDY71604 | Canola | cytosol | 36.03 | 36.96 |
| CDY63243 | Canola | mitochondrion | 15.08 | 35.76 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | GO:A0A078CX90 | EnsemblPlants:CDX81796 | ProteinID:CDX81796 | ProteinID:CDX81796.1 |
| InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00136738001 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase |
| PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF168 | SUPFAM:SSF51197 |
| UniParc:UPI0004EC2F13 | SEG:seg | : | : | : | : |
Description
BnaC08g38050D
Coordinates
chrLK031826:+:838346..840039
Molecular Weight (calculated)
41018.7 Da
IEP (calculated)
5.764
GRAVY (calculated)
-0.344
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MESKESAQWS SIVVPSVQEM VKEKMVTTVP PRYVRPDQDK TEVTDRSGLN TEIPIIDMKR LCSSTTMDSE VEKLDFACKE WGFFQLVNHG IDPSFLDKIK
101: LEIQGFFNLP MEEKKKFWQQ PNEIEGFGQA FVVSEDQKLD WADMFYHIVQ PIEARKPHLF PKLPLPFRDT LETYSTEVQS IAKILIAKMA RALEVKPEEM
201: LKLFDDVDSV QMMRMNYYPP CPQPDKVIGL SPHSDSVGLT ILLQVNEVEG LQIKKDGKWV PVKPLPNAFI VNIGDVIEII TNGTYRSIEH RGVVNSEKER
301: LSIATFHNPG LYKEVGPAQS LVERQKVRKF KSLTMKEYMD GLFSRTLDGK AYLDALKI
101: LEIQGFFNLP MEEKKKFWQQ PNEIEGFGQA FVVSEDQKLD WADMFYHIVQ PIEARKPHLF PKLPLPFRDT LETYSTEVQS IAKILIAKMA RALEVKPEEM
201: LKLFDDVDSV QMMRMNYYPP CPQPDKVIGL SPHSDSVGLT ILLQVNEVEG LQIKKDGKWV PVKPLPNAFI VNIGDVIEII TNGTYRSIEH RGVVNSEKER
301: LSIATFHNPG LYKEVGPAQS LVERQKVRKF KSLTMKEYMD GLFSRTLDGK AYLDALKI
001: MEAKGAAQWS SILVPSVQEM VKEKTITTVP PRYVRSDQDK TEVDDDFDVK IEIPIIDMKR LCSSTTMDSE VEKLDFACKE WGFFQLVNHG IDSSFLDKVK
101: SEIQDFFNLP MEEKKKFWQR PDEIEGFGQA FVVSEDQKLD WADLFFHTVQ PVELRKPHLF PKLPLPFRDT LEMYSSEVQS VAKILIAKMA RALEIKPEEL
201: EKLFDDVDSV QSMRMNYYPP CPQPDQVIGL TPHSDSVGLT VLMQVNDVEG LQIKKDGKWV PVKPLPNAFI VNIGDVLEII TNGTYRSIEH RGVVNSEKER
301: LSIATFHNVG MYKEVGPAKS LVERQKVARF KRLTMKEYND GLFSRTLDGK AYLDALRI
101: SEIQDFFNLP MEEKKKFWQR PDEIEGFGQA FVVSEDQKLD WADLFFHTVQ PVELRKPHLF PKLPLPFRDT LEMYSSEVQS VAKILIAKMA RALEIKPEEL
201: EKLFDDVDSV QSMRMNYYPP CPQPDQVIGL TPHSDSVGLT VLMQVNDVEG LQIKKDGKWV PVKPLPNAFI VNIGDVLEII TNGTYRSIEH RGVVNSEKER
301: LSIATFHNVG MYKEVGPAKS LVERQKVARF KRLTMKEYND GLFSRTLDGK AYLDALRI
Arabidopsis Description
SRG1Protein SRG1 [Source:UniProtKB/Swiss-Prot;Acc:Q39224]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.