Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026695.1-P | Field mustard | cytosol, nucleus, peroxisome | 100.0 | 94.12 |
| CDY40002 | Canola | cytosol | 82.81 | 76.81 |
| CDY35138 | Canola | cytosol, nucleus, peroxisome | 84.69 | 73.84 |
| CDX92691 | Canola | cytosol | 32.5 | 71.23 |
| AT1G17010.1 | Thale cress | cytosol | 76.25 | 67.59 |
| CDX81796 | Canola | cytosol | 74.69 | 66.76 |
| CDY52350 | Canola | cytosol | 54.06 | 64.79 |
| CDY24860 | Canola | cytosol | 54.06 | 64.79 |
| CDX89424 | Canola | cytosol | 58.12 | 64.14 |
| CDY08973 | Canola | cytosol | 53.44 | 64.04 |
| CDY21769 | Canola | cytosol | 72.81 | 64.01 |
| CDX94459 | Canola | cytosol | 49.06 | 63.56 |
| CDY08970 | Canola | cytosol | 70.31 | 62.85 |
| CDX92689 | Canola | cytosol | 70.0 | 62.4 |
| CDY24858 | Canola | cytosol, peroxisome, plastid | 69.06 | 61.73 |
| CDY11068 | Canola | cytosol | 66.56 | 60.17 |
| CDX81795 | Canola | cytosol, nucleus, peroxisome | 96.56 | 57.65 |
| CDX89425 | Canola | cytosol, peroxisome, plastid | 34.69 | 54.15 |
| CDY52434 | Canola | cytosol, nucleus, peroxisome | 60.0 | 53.63 |
| CDX88453 | Canola | cytosol, nucleus, peroxisome | 60.62 | 53.44 |
| KRH13456 | Soybean | cytosol | 58.12 | 52.69 |
| KRH21858 | Soybean | cytosol | 58.75 | 52.66 |
| KRH27439 | Soybean | cytosol | 59.06 | 52.65 |
| VIT_15s0021g00950.t01 | Wine grape | cytosol | 55.94 | 51.44 |
| KRH27437 | Soybean | cytosol | 57.5 | 51.4 |
| VIT_15s0021g00960.t01 | Wine grape | cytosol | 58.12 | 51.1 |
| VIT_10s0003g02450.t01 | Wine grape | cytosol | 55.31 | 48.36 |
| VIT_10s0003g02470.t01 | Wine grape | cytosol, mitochondrion, peroxisome, plastid | 31.56 | 47.2 |
| CDY37294 | Canola | cytosol, nucleus, peroxisome | 40.62 | 35.81 |
| CDY19267 | Canola | cytosol | 40.31 | 35.54 |
| CDY44337 | Canola | cytosol | 39.38 | 34.71 |
| CDY38615 | Canola | cytosol | 39.38 | 34.71 |
| CDY63243 | Canola | mitochondrion | 16.25 | 34.44 |
| CDY28799 | Canola | cytoskeleton, cytosol, peroxisome | 24.06 | 34.22 |
| CDY51847 | Canola | cytosol | 35.94 | 33.05 |
| CDY71604 | Canola | cytosol | 35.62 | 32.66 |
| CDX92465 | Canola | cytosol | 35.0 | 32.09 |
| CDY56860 | Canola | cytosol | 34.38 | 31.7 |
| CDY69556 | Canola | cytosol | 1.88 | 15.79 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | GO:A0A078G5N6 | UniProt:A0A078G5N6 | EnsemblPlants:CDY21770 | ProteinID:CDY21770 |
| ProteinID:CDY21770.1 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00016281001 | InterPro:IPNS-like |
| InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 |
| PANTHER:PTHR10209 | PANTHER:PTHR10209:SF168 | SUPFAM:SSF51197 | UniParc:UPI0004EE9B7D | : | : |
Description
BnaA09g45210DBnaA09g45210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G5N6]
Coordinates
chrLK032123:-:642667..644732
Molecular Weight (calculated)
36404.6 Da
IEP (calculated)
4.471
GRAVY (calculated)
-0.315
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPKGETQWS SIIVPSVQEM VKEKIITTVP PRYVQSGVIE DSDLLTEIPI IDMKQLCSFT SMDSDSELVN HGLDPSFLDK TKSEIQDFFD LPMEEKKKFW
101: QQPNEMEGFG QAFVVSEDQK LDWADMFFFI DTLEMYSAQV KSIAKILIAK MGEALQINPE ENEDLFGDDM LQSMRMNYYP PCPDPHQVIG LTPHSDAVAL
201: TILLQVNEVE GLQIKKDGKW VSIKPLPNAF IVNVGDILEI ITNGTYKSIE HRAVVNSEKE RLSVATFHYP GLNKEISPSK SLVEKQQKDA NFRSLTTKDY
301: LRGLFSSELY GKTYLDAMRI
101: QQPNEMEGFG QAFVVSEDQK LDWADMFFFI DTLEMYSAQV KSIAKILIAK MGEALQINPE ENEDLFGDDM LQSMRMNYYP PCPDPHQVIG LTPHSDAVAL
201: TILLQVNEVE GLQIKKDGKW VSIKPLPNAF IVNVGDILEI ITNGTYKSIE HRAVVNSEKE RLSVATFHYP GLNKEISPSK SLVEKQQKDA NFRSLTTKDY
301: LRGLFSSELY GKTYLDAMRI
001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.