Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21770 | Canola | cytosol, nucleus, peroxisome | 57.65 | 96.56 |
| CDY35138 | Canola | cytosol, nucleus, peroxisome | 56.34 | 82.29 |
| CDY40002 | Canola | cytosol | 52.24 | 81.16 |
| AT1G17010.1 | Thale cress | cytosol | 50.37 | 74.79 |
| CDX81796 | Canola | cytosol | 49.81 | 74.58 |
| CDX92691 | Canola | cytosol | 19.59 | 71.92 |
| CDY21769 | Canola | cytosol | 48.69 | 71.7 |
| CDX94459 | Canola | cytosol | 32.65 | 70.85 |
| CDY52350 | Canola | cytosol | 35.26 | 70.79 |
| CDY08970 | Canola | cytosol | 46.83 | 70.11 |
| CDY24860 | Canola | cytosol | 34.89 | 70.04 |
| CDX89424 | Canola | cytosol | 37.87 | 70.0 |
| CDY08973 | Canola | cytosol | 34.7 | 69.66 |
| CDY24858 | Canola | cytosol, peroxisome, plastid | 45.71 | 68.44 |
| CDY11068 | Canola | cytosol | 44.4 | 67.23 |
| CDX92689 | Canola | cytosol | 44.78 | 66.85 |
| KRH13456 | Soybean | cytosol | 39.18 | 59.49 |
| CDY52434 | Canola | cytosol, nucleus, peroxisome | 39.55 | 59.22 |
| KRH21858 | Soybean | cytosol | 39.37 | 59.1 |
| CDX88453 | Canola | cytosol, nucleus, peroxisome | 39.74 | 58.68 |
| KRH27439 | Soybean | cytosol | 39.18 | 58.5 |
| KRH27437 | Soybean | cytosol | 38.81 | 58.1 |
| VIT_15s0021g00960.t01 | Wine grape | cytosol | 39.37 | 57.97 |
| VIT_15s0021g00950.t01 | Wine grape | cytosol | 37.5 | 57.76 |
| VIT_10s0003g02470.t01 | Wine grape | cytosol, mitochondrion, peroxisome, plastid | 22.01 | 55.14 |
| CDX89425 | Canola | cytosol, peroxisome, plastid | 21.08 | 55.12 |
| VIT_10s0003g02450.t01 | Wine grape | cytosol | 36.75 | 53.83 |
| CDY37294 | Canola | cytosol, nucleus, peroxisome | 27.05 | 39.94 |
| CDY19267 | Canola | cytosol | 26.87 | 39.67 |
| CDY44337 | Canola | cytosol | 26.49 | 39.12 |
| CDY38615 | Canola | cytosol | 26.49 | 39.12 |
| CDY28799 | Canola | cytoskeleton, cytosol, peroxisome | 15.67 | 37.33 |
| CDY51847 | Canola | cytosol | 22.76 | 35.06 |
| CDX92465 | Canola | cytosol | 22.76 | 34.96 |
| CDY56860 | Canola | cytosol | 22.57 | 34.87 |
| CDY71604 | Canola | cytosol | 22.57 | 34.67 |
| CDY69556 | Canola | cytosol | 2.43 | 34.21 |
| CDY63243 | Canola | mitochondrion | 9.51 | 33.77 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | GO:A0A078CY80 | EnsemblPlants:CDX81795 | ProteinID:CDX81795 | ProteinID:CDX81795.1 |
| InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00136737001 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase |
| PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF168 | SUPFAM:SSF51197 |
| UniParc:UPI0004EEDA24 | SEG:seg | : | : | : | : |
Description
BnaC08g38060D
Coordinates
chrLK031826:+:824059..827686
Molecular Weight (calculated)
60000.0 Da
IEP (calculated)
5.357
GRAVY (calculated)
-0.178
Length
536 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPKGETQWS SIIVLSVQEM VKEKIITTVP PRYVQSGVVE DSDLLTEIPI IDMKQLCSFT SMDSDSEVQK LNLACNEFGF FQAQLCLYGH LQLVNHGVDP
101: SFLDITKCEI QDFFNLPMEE KKKFWQQPNE MEGFGQAFVV SEDQKLDWAD MFFFIVQPVE LRKPHLFPKL HLPFRDTLEM YSAQVKSIAK ILIAKMGEAL
201: QINPEENEDL FGDDMLQSMR MNYYPPCPEP HQVIGLTPHS DAVALTILLQ VNEVEGLQIK KDGKWVSIKP LPNAFIVNVG DILEPPHLDI GEPLAAGVEP
301: SSIAMFVIRS SYSSYPPGSV SLRRKLVVVS RSSCLSLYGS STTRPNIFWG VPQTVEFLAG YSRCSSSMSL SCYVYLSRDE YPSRSGVDAC HPNGTAPHQP
401: DPSPSPPPAS PVLSPKLPFL HRASSVVLAI SRQAVCSEPE DASDFVSTIF RGADWIITNG TYKSIEHRAV VNSEKERLSI ATFHYPGLYK EISPSKSLVE
501: KQQKGANFRS LTTKDYLKGL FSSELYGKTY LDAMRI
101: SFLDITKCEI QDFFNLPMEE KKKFWQQPNE MEGFGQAFVV SEDQKLDWAD MFFFIVQPVE LRKPHLFPKL HLPFRDTLEM YSAQVKSIAK ILIAKMGEAL
201: QINPEENEDL FGDDMLQSMR MNYYPPCPEP HQVIGLTPHS DAVALTILLQ VNEVEGLQIK KDGKWVSIKP LPNAFIVNVG DILEPPHLDI GEPLAAGVEP
301: SSIAMFVIRS SYSSYPPGSV SLRRKLVVVS RSSCLSLYGS STTRPNIFWG VPQTVEFLAG YSRCSSSMSL SCYVYLSRDE YPSRSGVDAC HPNGTAPHQP
401: DPSPSPPPAS PVLSPKLPFL HRASSVVLAI SRQAVCSEPE DASDFVSTIF RGADWIITNG TYKSIEHRAV VNSEKERLSI ATFHYPGLYK EISPSKSLVE
501: KQQKGANFRS LTTKDYLKGL FSSELYGKTY LDAMRI
001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.