Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035046.1-P | Field mustard | cytosol | 94.41 | 94.41 |
| CDX88453 | Canola | cytosol, nucleus, peroxisome | 94.69 | 93.39 |
| AT1G78550.1 | Thale cress | cytosol, nucleus, peroxisome | 83.24 | 83.71 |
| CDX92691 | Canola | cytosol | 26.54 | 65.07 |
| CDX94459 | Canola | cytosol | 43.85 | 63.56 |
| CDX81796 | Canola | cytosol | 62.57 | 62.57 |
| CDY52350 | Canola | cytosol | 46.37 | 62.17 |
| CDY40002 | Canola | cytosol | 59.78 | 62.03 |
| CDY08970 | Canola | cytosol | 61.73 | 61.73 |
| CDY21769 | Canola | cytosol | 62.01 | 60.99 |
| CDY11068 | Canola | cytosol | 60.06 | 60.73 |
| CDX89424 | Canola | cytosol | 49.16 | 60.69 |
| CDY08973 | Canola | cytosol | 45.25 | 60.67 |
| CDY24858 | Canola | cytosol, peroxisome, plastid | 60.61 | 60.61 |
| CDY24860 | Canola | cytosol | 44.97 | 60.3 |
| CDY21770 | Canola | cytosol, nucleus, peroxisome | 53.63 | 60.0 |
| CDY35138 | Canola | cytosol, nucleus, peroxisome | 61.45 | 59.95 |
| CDX92689 | Canola | cytosol | 60.06 | 59.89 |
| KRH13456 | Soybean | cytosol | 53.91 | 54.67 |
| KRH21858 | Soybean | cytosol | 54.19 | 54.34 |
| KRH27439 | Soybean | cytosol | 53.91 | 53.76 |
| KRH27437 | Soybean | cytosol | 52.51 | 52.51 |
| VIT_10s0003g02450.t01 | Wine grape | cytosol | 53.07 | 51.91 |
| VIT_15s0021g00950.t01 | Wine grape | cytosol | 49.72 | 51.15 |
| VIT_15s0021g00960.t01 | Wine grape | cytosol | 51.4 | 50.55 |
| VIT_10s0003g02470.t01 | Wine grape | cytosol, mitochondrion, peroxisome, plastid | 29.33 | 49.07 |
| CDX89425 | Canola | cytosol, peroxisome, plastid | 26.26 | 45.85 |
| CDY69556 | Canola | cytosol | 4.75 | 44.74 |
| CDX81795 | Canola | cytosol, nucleus, peroxisome | 59.22 | 39.55 |
| CDY44337 | Canola | cytosol | 39.66 | 39.12 |
| CDY38615 | Canola | cytosol | 39.39 | 38.84 |
| CDY37294 | Canola | cytosol, nucleus, peroxisome | 38.83 | 38.29 |
| CDY19267 | Canola | cytosol | 38.83 | 38.29 |
| CDY28799 | Canola | cytoskeleton, cytosol, peroxisome | 23.46 | 37.33 |
| CDX92465 | Canola | cytosol | 36.03 | 36.96 |
| CDY56860 | Canola | cytosol | 35.47 | 36.6 |
| CDY51847 | Canola | cytosol | 34.92 | 35.92 |
| CDY71604 | Canola | cytosol | 34.64 | 35.53 |
| CDY63243 | Canola | mitochondrion | 14.8 | 35.1 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | GO:A0A078ISJ8 | UniProt:A0A078ISJ8 | EnsemblPlants:CDY52434 | ProteinID:CDY52434 |
| ProteinID:CDY52434.1 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00006974001 | InterPro:IPNS-like |
| InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PRINTS:PR00682 |
| PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF168 | SUPFAM:SSF51197 | UniParc:UPI0004EE452A | : |
Description
BnaA07g39110DBnaA07g39110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ISJ8]
Coordinates
chrLK033087:+:4662..6033
Molecular Weight (calculated)
40649.6 Da
IEP (calculated)
4.740
GRAVY (calculated)
-0.352
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAEGETQWS SLLVPSVLEI AKENTVPPRY LRSDQDKTDT LDDSCLSSKL PVIDMQRLCS VSAMDTELEK LDLACQDWGF FQLVNHGIDS SFLEKLETEA
101: KDLFNLPMEE KKKLWQRSGE FEGFGQVNIV SEDQKLDWGD MFILTTQPSP SRKPHLFSKL PPSFRETVET YSSEVKSIAK ILFEKMACVL EVKREEMEDL
201: FGDVWQSIKI NYYPPCPEPD RVIGLTPHSD AAGLTILLQV NQVEGLQIKK DGKWVVVKPL PNALVVNVGE ILEIITNGRY RSIEHRVMVN SEKERLSVAM
301: FHSPGKETVI GPAKSLVDNH QQERLFKSMS TQEFFDAFFA QKLNGKSHLD LMTLDTSS
101: KDLFNLPMEE KKKLWQRSGE FEGFGQVNIV SEDQKLDWGD MFILTTQPSP SRKPHLFSKL PPSFRETVET YSSEVKSIAK ILFEKMACVL EVKREEMEDL
201: FGDVWQSIKI NYYPPCPEPD RVIGLTPHSD AAGLTILLQV NQVEGLQIKK DGKWVVVKPL PNALVVNVGE ILEIITNGRY RSIEHRVMVN SEKERLSVAM
301: FHSPGKETVI GPAKSLVDNH QQERLFKSMS TQEFFDAFFA QKLNGKSHLD LMTLDTSS
001: MEAEGEKQWS SLIVPFVLEI VKEKNFTTIP PRYVRVDQEK TEILNDSSLS SEIPVIDMTR LCSVSAMDSE LKKLDFACQD WGFFQLVNHG IDSSFLEKLE
101: TEVQEFFNLP MKEKQKLWQR SGEFEGFGQV NIVSENQKLD WGDMFILTTE PIRSRKSHLF SKLPPPFRET LETYSSEVKS IAKILFAKMA SVLEIKHEEM
201: EDLFDDVWQS IKINYYPPCP QPDQVMGLTQ HSDAAGLTIL LQVNQVEGLQ IKKDGKWVVV KPLRDALVVN VGEILEIITN GRYRSIEHRA VVNSEKERLS
301: VAMFHSPGKE TIIRPAKSLV DRQKQCLFKS MSTQEYFDAF FTQKLNGKSH LDLMRI
101: TEVQEFFNLP MKEKQKLWQR SGEFEGFGQV NIVSENQKLD WGDMFILTTE PIRSRKSHLF SKLPPPFRET LETYSSEVKS IAKILFAKMA SVLEIKHEEM
201: EDLFDDVWQS IKINYYPPCP QPDQVMGLTQ HSDAAGLTIL LQVNQVEGLQ IKKDGKWVVV KPLRDALVVN VGEILEIITN GRYRSIEHRA VVNSEKERLS
301: VAMFHSPGKE TIIRPAKSLV DRQKQCLFKS MSTQEYFDAF FTQKLNGKSH LDLMRI
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SYM7]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.