Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52434 | Canola | cytosol, nucleus, peroxisome | 93.39 | 94.69 |
| Bra035046.1-P | Field mustard | cytosol | 93.11 | 94.41 |
| AT1G78550.1 | Thale cress | cytosol, nucleus, peroxisome | 83.47 | 85.11 |
| CDX92691 | Canola | cytosol | 25.62 | 63.7 |
| CDX81796 | Canola | cytosol | 60.88 | 61.73 |
| CDY40002 | Canola | cytosol | 58.4 | 61.45 |
| CDX94459 | Canola | cytosol | 41.6 | 61.13 |
| CDY52350 | Canola | cytosol | 44.9 | 61.05 |
| CDY21770 | Canola | cytosol, nucleus, peroxisome | 53.44 | 60.62 |
| CDY08970 | Canola | cytosol | 59.78 | 60.61 |
| CDY21769 | Canola | cytosol | 60.33 | 60.16 |
| CDY08973 | Canola | cytosol | 44.08 | 59.93 |
| CDY11068 | Canola | cytosol | 58.4 | 59.89 |
| CDY35138 | Canola | cytosol, nucleus, peroxisome | 60.33 | 59.67 |
| CDY24860 | Canola | cytosol | 43.8 | 59.55 |
| CDY24858 | Canola | cytosol, peroxisome, plastid | 58.68 | 59.5 |
| CDX89424 | Canola | cytosol | 47.38 | 59.31 |
| CDX92689 | Canola | cytosol | 58.13 | 58.77 |
| KRH13456 | Soybean | cytosol | 53.99 | 55.52 |
| KRH21858 | Soybean | cytosol | 53.17 | 54.06 |
| KRH27439 | Soybean | cytosol | 53.17 | 53.76 |
| VIT_10s0003g02450.t01 | Wine grape | cytosol | 52.89 | 52.46 |
| KRH27437 | Soybean | cytosol | 51.52 | 52.23 |
| VIT_15s0021g00950.t01 | Wine grape | cytosol | 49.86 | 52.01 |
| VIT_15s0021g00960.t01 | Wine grape | cytosol | 50.96 | 50.82 |
| VIT_10s0003g02470.t01 | Wine grape | cytosol, mitochondrion, peroxisome, plastid | 29.2 | 49.53 |
| CDX89425 | Canola | cytosol, peroxisome, plastid | 25.62 | 45.37 |
| CDY69556 | Canola | cytosol | 4.68 | 44.74 |
| CDX81795 | Canola | cytosol, nucleus, peroxisome | 58.68 | 39.74 |
| CDY44337 | Canola | cytosol | 39.39 | 39.39 |
| CDY38615 | Canola | cytosol | 39.12 | 39.12 |
| CDY37294 | Canola | cytosol, nucleus, peroxisome | 38.02 | 38.02 |
| CDY19267 | Canola | cytosol | 38.02 | 38.02 |
| CDY28799 | Canola | cytoskeleton, cytosol, peroxisome | 22.86 | 36.89 |
| CDX92465 | Canola | cytosol | 34.44 | 35.82 |
| CDY56860 | Canola | cytosol | 33.88 | 35.45 |
| CDY51847 | Canola | cytosol | 33.33 | 34.77 |
| CDY71604 | Canola | cytosol | 33.33 | 34.67 |
| CDY63243 | Canola | mitochondrion | 14.33 | 34.44 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | GO:A0A078DMJ6 | EnsemblPlants:CDX88453 | ProteinID:CDX88453 | ProteinID:CDX88453.1 |
| InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00147999001 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase |
| PFAM:PF03171 | PFAM:PF14226 | PRINTS:PR00682 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF168 |
| SUPFAM:SSF51197 | UniParc:UPI0004EF47BD | : | : | : | : |
Description
BnaC06g38970D
Coordinates
chrLK031855:-:1098188..1099623
Molecular Weight (calculated)
41222.4 Da
IEP (calculated)
4.829
GRAVY (calculated)
-0.316
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAEGETQWS SLLVPSVLEI AKENNFTTVP PRYLRSEQDK TETLDDSCLS SKLPVIDMQR LCSVSAMDTT ELKKLDLACQ DWGFFQLVNH GIDSSFLEKL
101: ETEAQDLFNL PMEEKKRLWQ RSGEFEGFGQ VNIVSEDQKL DWGDMFILTT QPIPSRKPHL FSKLPPSFRE TVETYSSQVK SLAKILFAKM ACVLEVEREE
201: MEDLFGDVWQ SIKINYYPPC PQPDQVIGLT PHSDAAGLTI LLQVNQVEGL QIKKDNKWVV VKPLPNALVV NVGEILEIIT NGRYRSIEHR VMVNAEKERL
301: SVAMFHSPGK ETVIGPAKSL VDKHQQQCLF KSMSTQEFFD AFFAQKLNGK SHLDLMTLDN TSS
101: ETEAQDLFNL PMEEKKRLWQ RSGEFEGFGQ VNIVSEDQKL DWGDMFILTT QPIPSRKPHL FSKLPPSFRE TVETYSSQVK SLAKILFAKM ACVLEVEREE
201: MEDLFGDVWQ SIKINYYPPC PQPDQVIGLT PHSDAAGLTI LLQVNQVEGL QIKKDNKWVV VKPLPNALVV NVGEILEIIT NGRYRSIEHR VMVNAEKERL
301: SVAMFHSPGK ETVIGPAKSL VDKHQQQCLF KSMSTQEFFD AFFAQKLNGK SHLDLMTLDN TSS
001: MEAEGEKQWS SLIVPFVLEI VKEKNFTTIP PRYVRVDQEK TEILNDSSLS SEIPVIDMTR LCSVSAMDSE LKKLDFACQD WGFFQLVNHG IDSSFLEKLE
101: TEVQEFFNLP MKEKQKLWQR SGEFEGFGQV NIVSENQKLD WGDMFILTTE PIRSRKSHLF SKLPPPFRET LETYSSEVKS IAKILFAKMA SVLEIKHEEM
201: EDLFDDVWQS IKINYYPPCP QPDQVMGLTQ HSDAAGLTIL LQVNQVEGLQ IKKDGKWVVV KPLRDALVVN VGEILEIITN GRYRSIEHRA VVNSEKERLS
301: VAMFHSPGKE TIIRPAKSLV DRQKQCLFKS MSTQEYFDAF FTQKLNGKSH LDLMRI
101: TEVQEFFNLP MKEKQKLWQR SGEFEGFGQV NIVSENQKLD WGDMFILTTE PIRSRKSHLF SKLPPPFRET LETYSSEVKS IAKILFAKMA SVLEIKHEEM
201: EDLFDDVWQS IKINYYPPCP QPDQVMGLTQ HSDAAGLTIL LQVNQVEGLQ IKKDGKWVVV KPLRDALVVN VGEILEIITN GRYRSIEHRA VVNSEKERLS
301: VAMFHSPGKE TIIRPAKSLV DRQKQCLFKS MSTQEYFDAF FTQKLNGKSH LDLMRI
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SYM7]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.