Factsheet for AT1G78550.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

cytosol 2
peroxisome 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88453	Canola	cytosol, nucleus, peroxisome	85.11	83.47
CDY52434	Canola	cytosol, nucleus, peroxisome	83.71	83.24
Bra035046.1-P	Field mustard	cytosol	82.87	82.4
AT4G25310.1	Thale cress	cytosol	65.17	65.72
AT4G25300.1	Thale cress	cytosol	64.89	64.89
AT1G17020.1	Thale cress	cytosol	65.17	64.8
AT1G17010.1	Thale cress	cytosol	62.36	61.5
KRH13456	Soybean	cytosol	53.37	53.82
KRH21858	Soybean	cytosol	53.65	53.5
KRH27439	Soybean	cytosol	53.93	53.48
VIT_15s0021g00950.t01	Wine grape	cytosol	50.84	52.01
VIT_15s0021g00960.t01	Wine grape	cytosol	52.53	51.37
VIT_10s0003g02450.t01	Wine grape	cytosol	52.81	51.37
KRH27437	Soybean	cytosol	51.12	50.84
VIT_10s0003g02470.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	30.06	50.0
GSMUA_AchrUn_...	Banana	cytosol, peroxisome	27.25	45.33
GSMUA_AchrUn_...	Banana	cytosol, peroxisome	35.96	45.07
TraesCS4B01G374200.1	Wheat	cytosol	43.54	44.54
TraesCS4D01G363200.1	Wheat	cytosol	43.54	44.54
TraesCS5A01G539800.1	Wheat	cytosol	43.26	44.25
TraesCS4D01G363100.1	Wheat	cytosol	43.26	44.13
GSMUA_Achr11P...	Banana	plastid	42.42	43.9
TraesCS3D01G013500.1	Wheat	mitochondrion	20.79	43.79
TraesCS4D01G363000.1	Wheat	cytosol	43.82	43.58
GSMUA_Achr11P...	Banana	cytosol	31.18	43.19
Zm00001d048547_P001	Maize	cytosol, peroxisome, plastid	43.26	43.14
TraesCS4B01G374300.1	Wheat	cytosol	42.13	42.98
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	42.7	42.94
GSMUA_Achr5P20940_001	Banana	cytosol	42.98	42.62
TraesCS3B01G440500.1	Wheat	cytosol	44.1	42.55
HORVU4Hr1G088340.42	Barley	cytosol	44.38	42.47
Os01t0351800-01	Rice	cytosol	41.01	42.44
TraesCS5A01G539700.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	41.01	42.44
TraesCS3A01G407800.1	Wheat	cytosol	43.54	42.01
TraesCS3D01G403000.1	Wheat	cytosol	43.54	42.01
EER95699	Sorghum	cytosol	41.85	41.97
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	41.85	41.97
TraesCS4D01G363300.1	Wheat	cytosol	40.17	41.94
TraesCS3D01G529900.1	Wheat	cytosol	41.29	41.88
HORVU3Hr1G091210.2	Barley	cytosol	43.54	41.67
TraesCS3A01G407900.1	Wheat	cytosol	42.98	41.58
TraesCS5A01G539900.1	Wheat	cytosol	37.08	41.51
Os01t0352100-01	Rice	cytosol	40.73	41.43
TraesCS3A01G524700.1	Wheat	cytosol	40.73	41.31
GSMUA_Achr11P...	Banana	cytosol	41.29	41.29
Zm00001d040597_P001	Maize	cytosol	41.29	41.29
GSMUA_Achr11P...	Banana	cytosol	41.01	41.13
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	40.73	40.85
TraesCS2A01G065600.1	Wheat	cytoskeleton, cytosol, peroxisome	41.57	40.44
Os10t0558200-00	Rice	cytosol	39.61	40.29
EES02838	Sorghum	cytosol	39.89	40.23
TraesCS2D01G063700.1	Wheat	cytoskeleton, cytosol, peroxisome	41.01	40.11
TraesCS2B01G077500.1	Wheat	cytoskeleton, cytosol, peroxisome	40.73	39.94
Os10t0558900-01	Rice	cytosol	31.18	39.93
HORVU2Hr1G010950.3	Barley	cytoskeleton, cytosol, peroxisome	40.45	39.89
TraesCS3B01G592000.1	Wheat	cytosol	42.42	39.84
Os10t0558750-01	Rice	cytosol, nucleus, peroxisome	31.18	39.78
TraesCS2D01G063600.1	Wheat	cytosol	41.01	39.78
EER91935	Sorghum	cytosol	40.17	39.72
EES08209	Sorghum	cytosol	40.45	39.34
EER91934	Sorghum	cytosol	39.61	39.28
TraesCS2A01G065500.1	Wheat	cytosol	40.45	39.24
Os10t0559500-01	Rice	cytosol	39.61	39.17
HORVU2Hr1G010960.1	Barley	cytosol, mitochondrion, peroxisome	39.33	39.11
AT3G21420.1	Thale cress	cytosol	39.89	39.01
KXG34760	Sorghum	cytosol	39.33	39.0
KXG37089	Sorghum	cytosol	39.33	39.0
KXG32356	Sorghum	plastid	37.92	38.9
TraesCS2D01G063800.1	Wheat	cytoskeleton, cytosol, peroxisome	39.89	38.8
TraesCS2D01G064000.1	Wheat	cytosol	29.49	38.75
TraesCS1B01G234500.1	Wheat	plastid	28.65	38.64
TraesCS2D01G063400.1	Wheat	cytosol	39.89	38.59
TraesCS2D01G064100.1	Wheat	cytosol	39.61	38.52
TraesCS1D01G222800.1	Wheat	cytosol	38.2	38.42
KXG37090	Sorghum	cytosol	39.04	38.4
Os10t0558700-02	Rice	cytosol, nucleus, peroxisome	38.48	38.38
TraesCSU01G044600.1	Wheat	mitochondrion	22.19	38.35
Zm00001d029218_P001	Maize	cytosol, peroxisome, plastid	33.15	38.31
TraesCS2B01G077800.1	Wheat	cytosol	39.33	38.25
HORVU2Hr1G010930.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	38.76	38.23
TraesCS2B01G077600.1	Wheat	cytosol	39.33	38.04
Zm00001d012819_P001	Maize	cytosol	38.76	37.91
TraesCS1A01G221200.1	Wheat	cytosol	37.64	37.85
TraesCS2A01G065400.1	Wheat	cytosol	39.04	37.77
TraesCS2D01G063500.1	Wheat	cytosol	39.04	37.77
HORVU4Hr1G080610.2	Barley	cytosol	38.48	37.74
TraesCS2A01G065800.1	Wheat	cytosol	38.76	37.7
TraesCSU01G175100.1	Wheat	cytosol	34.27	37.65
TraesCS2A01G065300.1	Wheat	cytosol	38.76	37.5
TraesCS4B01G335300.2	Wheat	cytosol	37.92	37.19
HORVU1Hr1G056210.5	Barley	cytosol	37.08	37.18
TraesCS4B01G374100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.85	37.06
EES02842	Sorghum	cytosol	39.89	36.88
Os03t0856000-01	Rice	cytosol	37.36	36.74
TraesCS3A01G477000.2	Wheat	cytosol	35.96	36.36
EES15940	Sorghum	cytosol	36.52	36.31
OQU92296	Sorghum	cytosol	36.52	36.21
Zm00001d041086_P001	Maize	cytosol	36.24	36.13
TraesCS3D01G471500.2	Wheat	cytosol	35.67	36.08
EES12050	Sorghum	cytosol	35.67	35.88
AT5G20400.1	Thale cress	cytosol	34.55	35.34
TraesCS5D01G468100.1	Wheat	cytosol	35.11	35.31
Os09t0354100-00	Rice	cytosol, peroxisome	28.37	35.19
Os10t0558400-00	Rice	cytosol, peroxisome	39.04	35.01
AT5G20550.1	Thale cress	cytosol	34.27	34.96
OQU92563	Sorghum	cytosol	36.52	34.95
Os03t0439500-01	Rice	cytosol	36.52	34.95
AT1G49390.1	Thale cress	cytosol	33.99	34.77
Zm00001d029636_P001	Maize	extracellular	35.11	34.72
TraesCS4D01G330600.1	Wheat	cytosol	35.39	34.62
TraesCS1B01G345200.1	Wheat	cytosol	34.83	34.44
TraesCS5B01G466400.1	Wheat	cytosol	33.99	34.18
TraesCS5A01G457300.1	Wheat	cytosol	33.15	34.01
TraesCS1A01G331300.1	Wheat	cytosol	33.71	33.99
AT5G54000.2	Thale cress	cytosol	33.15	33.81
TraesCS1A01G331400.1	Wheat	cytosol, peroxisome, plastid	35.11	32.22
TraesCS3B01G520100.3	Wheat	cytosol	34.55	31.7
OQU92565	Sorghum	mitochondrion, plastid	24.16	30.94
KXG39676	Sorghum	cytosol, endoplasmic reticulum, peroxisome	34.55	30.75
HORVU3Hr1G104290.2	Barley	plastid	35.39	29.58
TraesCS1D01G333300.1	Wheat	cytosol	27.25	29.57
KXG19500	Sorghum	cytosol, endoplasmic reticulum, peroxisome	36.8	29.37
HORVU1Hr1G077370.1	Barley	plastid	34.55	29.15
Os09t0353700-00	Rice	cytosol, peroxisome, plastid	30.9	27.09
Zm00001d041087_P001	Maize	cytosol	33.71	25.1
GSMUA_AchrUn_...	Banana	mitochondrion	35.39	20.42

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	EntrezGene:844191	ProteinID:AAD30580.1	ProteinID:AEE36120.1	EMBL:AF360338
ArrayExpress:AT1G78550	EnsemblPlantsGene:AT1G78550	RefSeq:AT1G78550	TAIR:AT1G78550	RefSeq:AT1G78550-TAIR-G	EnsemblPlants:AT1G78550.1
TAIR:AT1G78550.1	EMBL:AY051076	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	RefSeq:NP_177976.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF168	UniProt:Q9SYM7	SUPFAM:SSF51197
UniParc:UPI00000484B3	:	:	:	:	:

Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SYM7]

Coordinates

chr1:-:29544902..29546511

Molecular Weight (calculated)

41017.4 Da

IEP (calculated)

5.519

GRAVY (calculated)

-0.324

Length

356 amino acids

Sequence
(BLAST)

001: MEAEGEKQWS SLIVPFVLEI VKEKNFTTIP PRYVRVDQEK TEILNDSSLS SEIPVIDMTR LCSVSAMDSE LKKLDFACQD WGFFQLVNHG IDSSFLEKLE
101: TEVQEFFNLP MKEKQKLWQR SGEFEGFGQV NIVSENQKLD WGDMFILTTE PIRSRKSHLF SKLPPPFRET LETYSSEVKS IAKILFAKMA SVLEIKHEEM
201: EDLFDDVWQS IKINYYPPCP QPDQVMGLTQ HSDAAGLTIL LQVNQVEGLQ IKKDGKWVVV KPLRDALVVN VGEILEIITN GRYRSIEHRA VVNSEKERLS
301: VAMFHSPGKE TIIRPAKSLV DRQKQCLFKS MSTQEYFDAF FTQKLNGKSH LDLMRI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.