Factsheet for Zm00001d041086_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15940	Sorghum	cytosol	90.76	90.5
TraesCS2D01G063800.1	Wheat	cytoskeleton, cytosol, peroxisome	65.83	64.21
TraesCS2A01G065500.1	Wheat	cytosol	65.83	64.03
HORVU2Hr1G010930.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	64.71	63.99
TraesCS2D01G064000.1	Wheat	cytosol	48.46	63.84
TraesCS2D01G063600.1	Wheat	cytosol	65.55	63.76
TraesCS2A01G065400.1	Wheat	cytosol	64.99	63.04
TraesCS2B01G077600.1	Wheat	cytosol	64.99	63.04
TraesCS2D01G063400.1	Wheat	cytosol	64.99	63.04
HORVU2Hr1G010960.1	Barley	cytosol, mitochondrion, peroxisome	62.75	62.57
TraesCS2D01G063500.1	Wheat	cytosol	64.43	62.5
HORVU2Hr1G010950.3	Barley	cytoskeleton, cytosol, peroxisome	62.75	62.05
TraesCS2A01G065600.1	Wheat	cytoskeleton, cytosol, peroxisome	63.31	61.75
TraesCS2A01G065800.1	Wheat	cytosol	63.31	61.75
TraesCS2A01G065300.1	Wheat	cytosol	63.59	61.68
Zm00001d041087_P001	Maize	cytosol	82.35	61.51
TraesCS2D01G064100.1	Wheat	cytosol	62.75	61.2
TraesCS2B01G077500.1	Wheat	cytoskeleton, cytosol, peroxisome	62.18	61.16
TraesCS2D01G063700.1	Wheat	cytoskeleton, cytosol, peroxisome	61.9	60.71
TraesCS2B01G077800.1	Wheat	cytosol	61.9	60.38
VIT_02s0012g00320.t01	Wine grape	cytosol	35.01	45.79
Zm00001d012819_P001	Maize	cytosol	46.5	45.6
KRH75184	Soybean	cytosol	31.65	45.38
VIT_02s0012g00390.t01	Wine grape	cytosol	44.26	44.76
VIT_02s0012g00450.t01	Wine grape	cytosol, nucleus, peroxisome	43.98	44.48
Bra010470.1-P	Field mustard	cytosol	33.05	44.19
KRH21858	Soybean	cytosol	42.86	42.86
Zm00001d029218_P001	Maize	cytosol, peroxisome, plastid	36.97	42.86
VIT_02s0012g00400.t01	Wine grape	cytosol, peroxisome, plastid	41.18	42.49
Bra019177.1-P	Field mustard	cytosol	42.02	42.37
KRH27439	Soybean	cytosol	42.58	42.34
KRH75001	Soybean	cytosol	41.46	42.29
KRH13456	Soybean	cytosol	41.74	42.21
Bra026693.1-P	Field mustard	cytosol	42.3	42.18
VIT_02s0012g00360.t01	Wine grape	cytosol	39.5	41.96
AT4G25310.1	Thale cress	cytosol	41.46	41.93
KRH58590	Soybean	cytosol	42.02	41.78
KRH27437	Soybean	cytosol	41.74	41.62
KRH42495	Soybean	cytosol	41.46	41.57
KRH71025	Soybean	cytosol	41.18	41.29
VIT_02s0012g00440.t01	Wine grape	extracellular	15.13	41.22
KRH71028	Soybean	cytosol	42.02	41.21
KRH71023	Soybean	cytosol	41.18	41.06
Bra010472.1-P	Field mustard	cytosol	41.18	41.06
Zm00001d040597_P001	Maize	cytosol	40.9	41.01
Zm00001d048547_P001	Maize	cytosol, peroxisome, plastid	40.9	40.9
AT1G17020.1	Thale cress	cytosol	40.9	40.78
VIT_02s0012g00350.t01	Wine grape	cytosol	39.22	40.46
AT4G25300.1	Thale cress	cytosol	40.06	40.17
Solyc02g071360.2.1	Tomato	cytosol	40.62	39.94
AT1G17010.1	Thale cress	cytosol	40.34	39.89
Bra010469.1-P	Field mustard	cytosol	38.66	39.43
Solyc02g071440.2.1	Tomato	cytosol	38.66	39.43
PGSC0003DMT400007989	Potato	cytosol	40.06	39.39
PGSC0003DMT400018663	Potato	cytosol	39.78	39.34
Solyc08g062370.2.1	Tomato	cytoskeleton, cytosol, peroxisome	19.61	39.33
Solyc02g071430.2.1	Tomato	cytosol	40.06	39.29
Bra026008.1-P	Field mustard	cytosol, nucleus, peroxisome	37.82	39.13
Bra026695.1-P	Field mustard	cytosol, nucleus, peroxisome	37.25	39.12
PGSC0003DMT400007963	Potato	cytosol	40.06	39.07
KRG89247	Soybean	cytosol, peroxisome, plastid	25.77	38.98
PGSC0003DMT400059406	Potato	peroxisome	26.61	38.93
PGSC0003DMT400055956	Potato	cytosol	19.33	38.76
PGSC0003DMT400018673	Potato	cytosol	30.25	38.57
Solyc02g071490.2.1	Tomato	cytosol	38.94	38.5
Solyc02g071500.2.1	Tomato	cytosol	38.1	38.42
PGSC0003DMT400007999	Potato	cytosol	38.1	38.31
VIT_02s0012g00410.t01	Wine grape	plastid	36.97	38.15
Zm00001d042192_P001	Maize	extracellular	38.94	37.98
Solyc02g071380.2.1	Tomato	cytosol, nucleus, peroxisome	38.1	37.88
VIT_02s0012g00380.t01	Wine grape	cytosol	28.29	37.83
Solyc02g071470.2.1	Tomato	cytosol	38.1	37.78
KRG89246	Soybean	cytosol	38.1	37.67
PGSC0003DMT400007992	Potato	cytosol, nucleus, peroxisome	38.1	37.57
PGSC0003DMT400008001	Potato	cytosol	37.25	37.15
KRH49750	Soybean	cytosol	36.41	37.04
Solyc02g071450.2.1	Tomato	cytosol	37.25	36.94
CDY69556	Canola	cytosol	3.92	36.84
Solyc02g071410.2.1	Tomato	cytosol	36.97	36.67
KRH49748	Soybean	cytosol	37.53	36.61
Bra035046.1-P	Field mustard	cytosol	36.69	36.59
PGSC0003DMT400018670	Potato	cytosol	35.57	36.39
KRH21128	Soybean	cytosol	28.01	36.36
KRH43438	Soybean	nucleus	27.45	36.3
KRH11118	Soybean	cytosol, nucleus, peroxisome, plastid	37.82	36.29
Solyc02g071480.2.1	Tomato	cytosol, nucleus, peroxisome	34.73	36.26
AT1G78550.1	Thale cress	cytosol, nucleus, peroxisome	36.13	36.24
Solyc02g071400.2.1	Tomato	cytosol	34.45	36.18
Zm00001d029636_P001	Maize	extracellular	36.41	36.11
KRH58593	Soybean	cytosol, peroxisome, plastid	36.41	35.81
Zm00001d045145_P001	Maize	peroxisome	34.73	34.73
Zm00001d030548_P001	Maize	extracellular	33.33	33.71
PGSC0003DMT400007990	Potato	nucleus	19.89	32.87
Zm00001d045141_P001	Maize	cytosol	25.21	32.14
Bra013884.1-P	Field mustard	cytosol	38.1	30.98
Zm00001d037487_P001	Maize	cytosol	29.97	29.64

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	UniProt:A0A1D6MU20	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	ProteinID:ONM32380.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF376	SUPFAM:SSF51197	UniParc:UPI0001CABD51
EnsemblPlantsGene:Zm00001d041086	EnsemblPlants:Zm00001d041086_P001	EnsemblPlants:Zm00001d041086_T001	:	:	:

Description

Protein SRG1

Coordinates

chr3:+:96374135..96377733

Molecular Weight (calculated)

40420.4 Da

IEP (calculated)

6.055

GRAVY (calculated)

-0.296

Length

357 amino acids

Sequence
(BLAST)

001: MASESRISQV ATTIPVRNVQ DLAAYDAGEL TADALERYIR PDIDKDAVLY EHSGELPVVD LGRLNPQHWE EEAAAKLRYA CEEWGFFQVL SHGVPEEVMV
101: NIKRDIQEFF ELPLDVKNAY AQTPGDLQGY GQAYVVSNDQ KLDWADMFCI ISQPPPARDM KHWPTQPLTF RKSLEDYSVE LEKVAHSIVT AIGKILNIDP
201: ELMSDKYAVQ VLRMNYYPPC TSMPEKVLGF SPHSDASFLT ILSQVNSVEG LQIRRHGAWV PVKPHPEALL VNVGDLLEIM TNGKFKSIEH RVMINARKER
301: LSVSAFHNPK FDGVVAPVTV TPTEKLLYRT VKVEDYIKHH LSNKLDGKRA LDHVKTF

Best Arabidopsis Sequence Match ( AT1G17010.1 )
(BLAST)

001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.