Factsheet for Zm00001d048547_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

plastid 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95699	Sorghum	cytosol	87.68	88.17
TraesCS4D01G363200.1	Wheat	cytosol	64.99	66.67
TraesCS4B01G374200.1	Wheat	cytosol	64.71	66.38
TraesCS5A01G539800.1	Wheat	cytosol	64.71	66.38
TraesCS4D01G363300.1	Wheat	cytosol	61.62	64.52
TraesCS5A01G539900.1	Wheat	cytosol	56.86	63.84
TraesCS4D01G363100.1	Wheat	cytosol	62.18	63.61
TraesCS4B01G374300.1	Wheat	cytosol	62.18	63.61
TraesCS3D01G529900.1	Wheat	cytosol	62.18	63.25
Os01t0351800-01	Rice	cytosol	59.94	62.21
TraesCS5A01G539700.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	59.94	62.21
TraesCS4D01G363000.1	Wheat	cytosol	61.9	61.73
TraesCS3A01G524700.1	Wheat	cytosol	59.94	60.97
HORVU4Hr1G088340.42	Barley	cytosol	63.03	60.48
GSMUA_Achr11P...	Banana	plastid	57.14	59.3
TraesCS3B01G592000.1	Wheat	cytosol	62.18	58.58
Os01t0352100-01	Rice	cytosol	57.42	58.57
TraesCS4B01G374100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	62.75	55.72
VIT_02s0012g00440.t01	Wine grape	extracellular	18.21	49.62
VIT_02s0012g00390.t01	Wine grape	cytosol	48.46	49.01
VIT_02s0012g00450.t01	Wine grape	cytosol, nucleus, peroxisome	48.46	49.01
VIT_02s0012g00320.t01	Wine grape	cytosol	36.97	48.35
VIT_02s0012g00400.t01	Wine grape	cytosol, peroxisome, plastid	46.22	47.69
Zm00001d012819_P001	Maize	cytosol	48.46	47.53
Zm00001d040597_P001	Maize	cytosol	46.5	46.63
VIT_02s0012g00360.t01	Wine grape	cytosol	43.7	46.43
Zm00001d029218_P001	Maize	cytosol, peroxisome, plastid	39.5	45.78
Bra026693.1-P	Field mustard	cytosol	45.1	44.97
Bra010470.1-P	Field mustard	cytosol	33.61	44.94
AT4G25310.1	Thale cress	cytosol	44.26	44.76
KRH13456	Soybean	cytosol	43.98	44.48
Bra035046.1-P	Field mustard	cytosol	44.54	44.41
AT1G17010.1	Thale cress	cytosol	44.82	44.32
AT1G17020.1	Thale cress	cytosol	44.26	44.13
KRH21858	Soybean	cytosol	43.98	43.98
VIT_02s0012g00350.t01	Wine grape	cytosol	42.3	43.64
Bra026695.1-P	Field mustard	cytosol, nucleus, peroxisome	41.46	43.53
AT1G78550.1	Thale cress	cytosol, nucleus, peroxisome	43.14	43.26
AT4G25300.1	Thale cress	cytosol	43.14	43.26
KRH75184	Soybean	cytosol	29.97	42.97
Bra010469.1-P	Field mustard	cytosol	42.02	42.86
Solyc02g071430.2.1	Tomato	cytosol	43.7	42.86
PGSC0003DMT400007989	Potato	cytosol	43.42	42.7
Bra019177.1-P	Field mustard	cytosol	42.3	42.66
KRH71023	Soybean	cytosol	42.3	42.18
Solyc02g071360.2.1	Tomato	cytosol	42.86	42.15
PGSC0003DMT400007963	Potato	cytosol	43.14	42.08
Bra010472.1-P	Field mustard	cytosol	42.02	41.9
KRH58590	Soybean	cytosol	42.02	41.78
KRH27437	Soybean	cytosol	41.74	41.62
KRH42495	Soybean	cytosol	41.46	41.57
Solyc02g071380.2.1	Tomato	cytosol, nucleus, peroxisome	41.74	41.5
Bra026008.1-P	Field mustard	cytosol, nucleus, peroxisome	40.06	41.45
KRH75001	Soybean	cytosol	40.62	41.43
KRH27439	Soybean	cytosol	41.46	41.23
PGSC0003DMT400007999	Potato	cytosol	40.9	41.13
VIT_02s0012g00410.t01	Wine grape	plastid	39.78	41.04
Solyc02g071490.2.1	Tomato	cytosol	41.46	41.0
Zm00001d041086_P001	Maize	cytosol	40.9	40.9
PGSC0003DMT400018663	Potato	cytosol	41.18	40.72
PGSC0003DMT400007992	Potato	cytosol, nucleus, peroxisome	41.18	40.61
PGSC0003DMT400008001	Potato	cytosol	40.62	40.5
Solyc08g062370.2.1	Tomato	cytoskeleton, cytosol, peroxisome	20.17	40.45
Solyc02g071400.2.1	Tomato	cytosol	38.38	40.29
Solyc02g071500.2.1	Tomato	cytosol	39.78	40.11
KRH43438	Soybean	nucleus	30.25	40.0
KRH71028	Soybean	cytosol	40.62	39.84
KRH71025	Soybean	cytosol	39.5	39.61
VIT_02s0012g00380.t01	Wine grape	cytosol	29.41	39.33
PGSC0003DMT400018673	Potato	cytosol	30.81	39.29
Solyc02g071450.2.1	Tomato	cytosol	39.5	39.17
PGSC0003DMT400055956	Potato	cytosol	19.33	38.76
PGSC0003DMT400018670	Potato	cytosol	37.82	38.68
Solyc02g071470.2.1	Tomato	cytosol	38.94	38.61
Solyc02g071440.2.1	Tomato	cytosol	37.82	38.57
PGSC0003DMT400007990	Potato	nucleus	22.97	37.96
Solyc02g071410.2.1	Tomato	cytosol	38.1	37.78
PGSC0003DMT400059406	Potato	peroxisome	25.77	37.7
Solyc02g071480.2.1	Tomato	cytosol, nucleus, peroxisome	35.85	37.43
KRG89247	Soybean	cytosol, peroxisome, plastid	24.65	37.29
Zm00001d042192_P001	Maize	extracellular	37.53	36.61
KRH58593	Soybean	cytosol, peroxisome, plastid	36.97	36.36
KRH11118	Soybean	cytosol, nucleus, peroxisome, plastid	37.82	36.29
KRH49748	Soybean	cytosol	36.97	36.07
Zm00001d029636_P001	Maize	extracellular	36.13	35.83
KRG89246	Soybean	cytosol	35.57	35.18
KRH49750	Soybean	cytosol	34.45	35.04
KRH21128	Soybean	cytosol	26.89	34.91
Zm00001d045141_P001	Maize	cytosol	26.61	33.93
Zm00001d045145_P001	Maize	peroxisome	33.61	33.61
Zm00001d030548_P001	Maize	extracellular	31.65	32.01
Bra013884.1-P	Field mustard	cytosol	38.1	30.98
Zm00001d037487_P001	Maize	cytosol	29.69	29.36
Zm00001d041087_P001	Maize	cytosol	37.82	28.24

Protein Annotations

EntrezGene:100282672	Gene3D:2.60.120.330	MapMan:50.1.13	ProteinID:AQL10316.1	UniProt:B4FHR2	EMBL:BT036650
InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF360	SUPFAM:SSF51197	UniParc:UPI00017B727F	EnsemblPlantsGene:Zm00001d048547	EnsemblPlants:Zm00001d048547_P001
EnsemblPlants:Zm00001d048547_T001	SEG:seg	:	:	:	:

Description

Protein SRG1

Coordinates

chr9:-:158517739..158519168

Molecular Weight (calculated)

39549.4 Da

IEP (calculated)

5.547

GRAVY (calculated)

-0.124

Length

357 amino acids

Sequence
(BLAST)

001: MEMTGSLPVP SVQAMVAAGR HAPVPPRYLR PDLAADVVVA DDATTIPIID FQRLLLVDPE ESARLHAACQ DWGFFQLINH GVPDDVMEAM KASIQSFFAL
101: PAEAKQQYRQ QAGQLEGYGQ LFVVSEDQKL DWADVLYLNT QPPEHRNLSF WPAGESFRQT LDTYSAAVKH VADRLLGAMY MNLGLQLSIM DMDPERGAGI
201: QSVRMNYYPP CAEAADKVLG FSPHSDSDLL TLVLQVNQLQ GLQIKRPPDG GGAWAWLPVT PLQGAFVVNV GDVLEIFTNG RYRSVEHRAL VNAHTERLSI
301: AAFHSPSIHA TIGPLPELLG DQEVPKYKTL DHQSFITLFF SAKLQGKSFL ERMKKLS

Best Arabidopsis Sequence Match ( AT1G17020.1 )
(BLAST)

001: MEAKGAAQWS SILVPSVQEM VKEKTITTVP PRYVRSDQDK TEVDDDFDVK IEIPIIDMKR LCSSTTMDSE VEKLDFACKE WGFFQLVNHG IDSSFLDKVK
101: SEIQDFFNLP MEEKKKFWQR PDEIEGFGQA FVVSEDQKLD WADLFFHTVQ PVELRKPHLF PKLPLPFRDT LEMYSSEVQS VAKILIAKMA RALEIKPEEL
201: EKLFDDVDSV QSMRMNYYPP CPQPDQVIGL TPHSDSVGLT VLMQVNDVEG LQIKKDGKWV PVKPLPNAFI VNIGDVLEII TNGTYRSIEH RGVVNSEKER
301: LSIATFHNVG MYKEVGPAKS LVERQKVARF KRLTMKEYND GLFSRTLDGK AYLDALRI

Arabidopsis Description

SRG1Protein SRG1 [Source:UniProtKB/Swiss-Prot;Acc:Q39224]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.