Factsheet for Zm00001d041087_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041086_P001	Maize	cytosol	61.51	82.35
EES15940	Sorghum	cytosol	59.0	78.77
HORVU2Hr1G010930.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	43.51	57.62
TraesCS2D01G063800.1	Wheat	cytoskeleton, cytosol, peroxisome	43.51	56.83
TraesCS2D01G063400.1	Wheat	cytosol	43.31	56.25
TraesCS2D01G063600.1	Wheat	cytosol	43.1	56.13
TraesCS2A01G065500.1	Wheat	cytosol	43.1	56.13
TraesCS2D01G064000.1	Wheat	cytosol	31.8	56.09
TraesCS2A01G065800.1	Wheat	cytosol	42.89	56.01
TraesCS2A01G065400.1	Wheat	cytosol	43.1	55.98
TraesCS2B01G077600.1	Wheat	cytosol	43.1	55.98
HORVU2Hr1G010960.1	Barley	cytosol, mitochondrion, peroxisome	41.63	55.59
TraesCS2D01G064100.1	Wheat	cytosol	42.47	55.46
TraesCS2D01G063500.1	Wheat	cytosol	42.68	55.43
TraesCS2A01G065600.1	Wheat	cytoskeleton, cytosol, peroxisome	42.26	55.19
TraesCS2A01G065300.1	Wheat	cytosol	42.47	55.16
HORVU2Hr1G010950.3	Barley	cytoskeleton, cytosol, peroxisome	41.42	54.85
TraesCS2B01G077800.1	Wheat	cytosol	41.84	54.64
TraesCS2B01G077500.1	Wheat	cytoskeleton, cytosol, peroxisome	41.0	53.99
TraesCS2D01G063700.1	Wheat	cytoskeleton, cytosol, peroxisome	41.0	53.85
VIT_02s0012g00320.t01	Wine grape	cytosol	23.64	41.39
Zm00001d012819_P001	Maize	cytosol	30.75	40.38
VIT_02s0012g00390.t01	Wine grape	cytosol	29.5	39.94
VIT_02s0012g00450.t01	Wine grape	cytosol, nucleus, peroxisome	29.5	39.94
KRH21858	Soybean	cytosol	29.08	38.94
KRH13456	Soybean	cytosol	28.66	38.81
KRH27439	Soybean	cytosol	28.87	38.44
VIT_02s0012g00400.t01	Wine grape	cytosol, peroxisome, plastid	27.62	38.15
KRH71028	Soybean	cytosol	28.87	37.91
Zm00001d048547_P001	Maize	cytosol, peroxisome, plastid	28.24	37.82
KRH75184	Soybean	cytosol	19.67	37.75
KRH42495	Soybean	cytosol	28.03	37.64
Zm00001d040597_P001	Maize	cytosol	28.03	37.64
Solyc08g062370.2.1	Tomato	cytoskeleton, cytosol, peroxisome	14.02	37.64
PGSC0003DMT400055956	Potato	cytosol	14.02	37.64
KRH58590	Soybean	cytosol	28.24	37.6
VIT_02s0012g00350.t01	Wine grape	cytosol	27.2	37.57
Bra010470.1-P	Field mustard	cytosol	20.92	37.45
VIT_02s0012g00440.t01	Wine grape	extracellular	10.25	37.4
Bra026693.1-P	Field mustard	cytosol	27.82	37.15
AT4G25310.1	Thale cress	cytosol	27.41	37.11
KRH27437	Soybean	cytosol	27.62	36.87
KRH75001	Soybean	cytosol	26.99	36.86
PGSC0003DMT400018663	Potato	cytosol	27.82	36.84
VIT_02s0012g00360.t01	Wine grape	cytosol	25.73	36.61
AT1G17020.1	Thale cress	cytosol	27.41	36.59
KRH71023	Soybean	cytosol	27.41	36.59
Solyc02g071440.2.1	Tomato	cytosol	26.78	36.57
Solyc02g071430.2.1	Tomato	cytosol	27.82	36.54
Bra019177.1-P	Field mustard	cytosol	26.99	36.44
Zm00001d029218_P001	Maize	cytosol, peroxisome, plastid	23.43	36.36
Zm00001d042192_P001	Maize	extracellular	27.82	36.34
Bra010472.1-P	Field mustard	cytosol	27.2	36.31
Solyc02g071490.2.1	Tomato	cytosol	27.41	36.29
AT4G25300.1	Thale cress	cytosol	26.78	35.96
Solyc02g071380.2.1	Tomato	cytosol, nucleus, peroxisome	26.99	35.93
PGSC0003DMT400007989	Potato	cytosol	27.2	35.81
Solyc02g071360.2.1	Tomato	cytosol	27.2	35.81
PGSC0003DMT400007963	Potato	cytosol	27.41	35.79
KRH71025	Soybean	cytosol	26.57	35.67
Solyc02g071500.2.1	Tomato	cytosol	26.36	35.59
PGSC0003DMT400007999	Potato	cytosol	26.36	35.49
KRG89246	Soybean	cytosol	26.78	35.46
PGSC0003DMT400018673	Potato	cytosol	20.71	35.36
AT1G17010.1	Thale cress	cytosol	26.57	35.18
PGSC0003DMT400007992	Potato	cytosol, nucleus, peroxisome	26.57	35.08
Bra026008.1-P	Field mustard	cytosol, nucleus, peroxisome	25.31	35.07
Bra026695.1-P	Field mustard	cytosol, nucleus, peroxisome	24.9	35.0
VIT_02s0012g00410.t01	Wine grape	plastid	25.31	34.97
KRG89247	Soybean	cytosol, peroxisome, plastid	17.15	34.75
Solyc02g071450.2.1	Tomato	cytosol	26.15	34.72
Solyc02g071470.2.1	Tomato	cytosol	25.94	34.44
PGSC0003DMT400018670	Potato	cytosol	25.1	34.38
PGSC0003DMT400008001	Potato	cytosol	25.73	34.36
KRH49750	Soybean	cytosol	25.1	34.19
KRH49748	Soybean	cytosol	26.15	34.15
Bra010469.1-P	Field mustard	cytosol	24.9	34.0
Solyc02g071410.2.1	Tomato	cytosol	25.52	33.89
Bra035046.1-P	Field mustard	cytosol	25.31	33.8
VIT_02s0012g00380.t01	Wine grape	cytosol	18.83	33.71
AT1G78550.1	Thale cress	cytosol, nucleus, peroxisome	25.1	33.71
Zm00001d045145_P001	Maize	peroxisome	25.1	33.61
KRH11118	Soybean	cytosol, nucleus, peroxisome, plastid	25.94	33.33
Solyc02g071480.2.1	Tomato	cytosol, nucleus, peroxisome	23.85	33.33
Solyc02g071400.2.1	Tomato	cytosol	23.64	33.24
PGSC0003DMT400059406	Potato	peroxisome	16.95	33.2
KRH21128	Soybean	cytosol	19.04	33.09
KRH43438	Soybean	nucleus	18.62	32.96
KRH58593	Soybean	cytosol, peroxisome, plastid	24.48	32.23
Zm00001d030548_P001	Maize	extracellular	23.64	32.01
Zm00001d029636_P001	Maize	extracellular	24.06	31.94
Zm00001d045141_P001	Maize	cytosol	17.36	29.64
PGSC0003DMT400007990	Potato	nucleus	13.39	29.63
Zm00001d037487_P001	Maize	cytosol	20.71	27.42
Bra013884.1-P	Field mustard	cytosol	24.69	26.88
CDY69556	Canola	cytosol	1.05	13.16

Protein Annotations

Gene3D:2.60.120.330	MapMan:35.1	UniProt:A0A1D6MU21	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	ProteinID:ONM32381.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF376	SUPFAM:SSF51197	UniParc:UPI0008445724
EnsemblPlantsGene:Zm00001d041087	EnsemblPlants:Zm00001d041087_P001	EnsemblPlants:Zm00001d041087_T001	SEG:seg	:	:

Description

Protein SRG1

Coordinates

chr3:+:96428158..96432932

Molecular Weight (calculated)

53217.2 Da

IEP (calculated)

4.997

GRAVY (calculated)

-0.259

Length

478 amino acids

Sequence
(BLAST)

001: MASESRIAQV ATTIPVRNVQ DLAACDAGEL TADALERYVR PDIDKDAVLY EHSGELPVVD LGRLNPQHWE EEAAAKLRYA CEEWGFFQVL NHGVPEEVMV
101: SIKRDIQEFF ELPLDVKNAY AQTPGDLQGY GQAYVFSNDQ KLDWKSLEDY SAEVEKVAHS IATAIGKILN IDPELMSDKY AVQVLRMNYY PPCTSMPEKV
201: LGFSPHSDGS FLTILSQVNS VEGLQIKRHD AWVPVKPHPE ALLVNVGDFL ELGIDRTGTS SDKFVFGCGT AGDRQIMTNG KFKSIEHRVI INAHKERLSV
301: SAFHSPKFDG VVSPATATPT ENLLYRTVKV EVEMQKLSQI KSKKSLEDYS AEVEKVAHSI ATAIGKILNI DPELMSDKYA VQVLRMNYYP PCTSMPEKVL
401: GFSPHSDGSF LTILSQVNSV EGFQIKRHDA WVPVKPHPEA LLVNVGDFLE LGIDRTGTSS DVLSRPYNFE GQLETTLR

Best Arabidopsis Sequence Match ( AT1G17010.1 )
(BLAST)

001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.