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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:
  • mitochondrion 1
  • peroxisome 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, secretory
Any Predictor:mitochondrion, peroxisome, secretory
iPSORT:mitochondrion
MultiLoc:peroxisome
TargetP:secretory
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G064100.1 Wheat cytosol 94.18 92.9
TraesCS2A01G065800.1 Wheat cytosol 93.63 92.35
TraesCS2B01G077800.1 Wheat cytosol 92.8 91.53
HORVU2Hr1G010950.3 Barley cytoskeleton, cytosol, peroxisome 83.66 83.66
HORVU2Hr1G010960.1 Barley cytosol, mitochondrion, peroxisome 78.67 79.33
Zm00001d041086_P001 Maize cytosol 63.99 64.71
KXG34760 Sorghum cytosol 64.27 64.62
EES15940 Sorghum cytosol 62.88 63.41
HORVU4Hr1G080610.2 Barley cytosol 49.03 48.76
VIT_02s0012g00320.t01 Wine grape cytosol 35.18 46.52
VIT_02s0012g00390.t01 Wine grape cytosol 44.6 45.61
VIT_02s0012g00450.t01 Wine grape cytosol, nucleus, peroxisome 44.6 45.61
KRH75184 Soybean cytosol 31.02 44.98
KRH13456 Soybean cytosol 42.94 43.91
VIT_02s0012g00360.t01 Wine grape cytosol 40.72 43.75
VIT_02s0012g00400.t01 Wine grape cytosol, peroxisome, plastid 41.83 43.64
Zm00001d041087_P001 Maize cytosol 57.62 43.51
HORVU1Hr1G056210.5 Barley cytosol 42.66 43.38
KRH71025 Soybean cytosol 42.66 43.26
Bra010470.1-P Field mustard cytosol 31.86 43.07
KRH21858 Soybean cytosol 42.38 42.86
VIT_02s0012g00440.t01 Wine grape extracellular 15.51 42.75
Bra026693.1-P Field mustard cytosol 42.38 42.74
KRH27437 Soybean cytosol 42.38 42.74
VIT_02s0012g00350.t01 Wine grape cytosol 40.72 42.49
HORVU3Hr1G091210.2 Barley cytosol 43.77 42.47
AT4G25310.1 Thale cress cytosol 41.0 41.93
KRH42495 Soybean cytosol 41.0 41.57
KRH75001 Soybean cytosol 40.17 41.43
HORVU4Hr1G088340.42 Barley cytosol 42.66 41.4
AT4G25300.1 Thale cress cytosol 40.72 41.29
PGSC0003DMT400018663 Potato cytosol 41.27 41.27
KRH58590 Soybean cytosol 41.0 41.23
AT1G17020.1 Thale cress cytosol 40.72 41.06
KRH71023 Soybean cytosol 40.72 41.06
PGSC0003DMT400007989 Potato cytosol 41.27 41.05
KRH27439 Soybean cytosol 40.72 40.95
Solyc02g071360.2.1 Tomato cytosol 41.0 40.77
Solyc02g071490.2.1 Tomato cytosol 40.72 40.72
AT1G17010.1 Thale cress cytosol 40.44 40.44
Bra019177.1-P Field mustard cytosol 39.61 40.4
KRH71028 Soybean cytosol 40.72 40.38
Bra035046.1-P Field mustard cytosol 39.89 40.22
Solyc02g071430.2.1 Tomato cytosol 39.89 39.56
CDY69556 Canola cytosol 4.16 39.47
Solyc02g071440.2.1 Tomato cytosol 38.23 39.43
Bra026008.1-P Field mustard cytosol, nucleus, peroxisome 37.67 39.42
Bra010472.1-P Field mustard cytosol 39.06 39.39
PGSC0003DMT400007999 Potato cytosol 38.5 39.15
Solyc02g071500.2.1 Tomato cytosol 38.23 38.98
Bra026695.1-P Field mustard cytosol, nucleus, peroxisome 36.57 38.82
PGSC0003DMT400007963 Potato cytosol 39.34 38.8
AT1G78550.1 Thale cress cytosol, nucleus, peroxisome 38.23 38.76
Solyc08g062370.2.1 Tomato cytoskeleton, cytosol, peroxisome 19.11 38.76
Solyc02g071380.2.1 Tomato cytosol, nucleus, peroxisome 38.5 38.72
PGSC0003DMT400007992 Potato cytosol, nucleus, peroxisome 38.78 38.67
VIT_02s0012g00380.t01 Wine grape cytosol 28.53 38.58
Bra010469.1-P Field mustard cytosol 37.4 38.57
KRH43438 Soybean nucleus 28.81 38.52
PGSC0003DMT400055956 Potato cytosol 18.84 38.2
Solyc02g071450.2.1 Tomato cytosol 37.95 38.06
PGSC0003DMT400018673 Potato cytosol 29.36 37.86
KRG89247 Soybean cytosol, peroxisome, plastid 24.65 37.71
PGSC0003DMT400018670 Potato cytosol 36.29 37.54
Solyc02g071480.2.1 Tomato cytosol, nucleus, peroxisome 35.46 37.43
KRG89246 Soybean cytosol 37.4 37.4
PGSC0003DMT400059406 Potato peroxisome 25.21 37.3
VIT_02s0012g00410.t01 Wine grape plastid 35.73 37.28
Solyc02g071470.2.1 Tomato cytosol 37.12 37.22
PGSC0003DMT400008001 Potato cytosol 36.84 37.15
KRH21128 Soybean cytosol 28.25 37.09
KRH49750 Soybean cytosol 36.01 37.04
Solyc02g071410.2.1 Tomato cytosol 36.57 36.67
KRH49748 Soybean cytosol 37.12 36.61
Solyc02g071400.2.1 Tomato cytosol 33.8 35.88
KRH11118 Soybean cytosol, nucleus, peroxisome, plastid 36.84 35.75
KRH58593 Soybean cytosol, peroxisome, plastid 35.46 35.26
HORVU7Hr1G009200.1 Barley cytosol, peroxisome 18.01 34.76
PGSC0003DMT400007990 Potato nucleus 20.78 34.72
HORVU7Hr1G009310.3 Barley cytosol 32.96 34.29
HORVU1Hr1G066370.1 Barley cytosol, peroxisome 31.3 34.14
HORVU7Hr1G028840.5 Barley cytosol 33.52 34.08
HORVU3Hr1G098580.2 Barley plastid 42.11 33.19
HORVU7Hr1G009140.4 Barley cytosol, peroxisome 32.96 33.15
HORVU7Hr1G010150.1 Barley cytosol, endoplasmic reticulum, peroxisome 32.69 33.15
HORVU7Hr1G028850.1 Barley cytosol 32.41 32.77
HORVU6Hr1G078640.9 Barley cytosol, peroxisome 30.47 32.64
HORVU7Hr1G009320.1 Barley cytosol 24.38 32.47
HORVU6Hr1G088470.1 Barley cytosol 31.86 32.21
HORVU6Hr1G088540.1 Barley cytosol 31.86 32.21
HORVU7Hr1G028870.3 Barley cytosol 31.02 31.37
HORVU1Hr1G077370.1 Barley plastid 36.29 31.04
Bra013884.1-P Field mustard cytosol 37.12 30.52
HORVU5Hr1G075760.1 Barley cytosol 31.02 30.43
HORVU7Hr1G028880.10 Barley plastid 32.41 30.15
HORVU3Hr1G104290.2 Barley plastid 34.9 29.58
HORVU6Hr1G088420.2 Barley cytosol, peroxisome 29.09 29.41
HORVU7Hr1G028710.2 Barley cytosol 30.19 29.14
HORVU7Hr1G021490.3 Barley cytosol, peroxisome 25.48 29.11
HORVU6Hr1G088440.1 Barley cytosol 28.53 28.93
HORVU5Hr1G124390.1 Barley cytosol 22.99 27.39
HORVU5Hr1G065620.7 Barley plastid 27.15 26.7
HORVU0Hr1G019590.1 Barley peroxisome 18.56 26.69
HORVU2Hr1G096500.1 Barley cytosol 13.02 22.93
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13UniProt:A0A287H2E2InterPro:DIOX_NGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114
EnsemblPlantsGene:HORVU2Hr1G010930EnsemblPlants:HORVU2Hr1G010930.2InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171PFAM:PF14226PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF376SUPFAM:SSF51197
UniParc:UPI000B47DCBF:::::
Description
No Description!
Coordinates
chrchr2H:+:21485451..21490090
Molecular Weight (calculated)
40135.0 Da
IEP (calculated)
5.778
GRAVY (calculated)
-0.133
Length
361 amino acids
Sequence
(BLAST)
001: AGGSAGEIRW SKLGTSLPVA NVQALVASAG ELTVDQIERY IQPDIDAHAV LPEHSGEVPV IDLSNLLSPE SVEAEAAKLR FACAEWGFFQ VVNHGIPDEV
101: ITDIKQDIQK FFQLPLEVKN AYAQRPGDLQ GYGQAFVVSD DQKLDWSDLI ALFAQPTQGR DMSYWPTQPH TFRNSVEEYS LEVMKLAHSL NVFIAKTLDV
201: APELLADKHV AQFLRMSYYP PCTSMPKKVL GFSPHSDGSF LTILLEINSV QGLQIRRSGA WIPVKPRHDA LLVNVGDLLE IMSNGKYKSI EHRVTINAHK
301: ERLSISAFHV PNYDGIISPI LGTTEEKMLY KTVGVEEYAR LYFANKLEGK RALDYAKLSG I
Best Arabidopsis Sequence Match ( AT1G17010.1 )
(BLAST)
001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.