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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:
  • cytosol 3
  • peroxisome 1
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, peroxisome
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400007992 Potato cytosol, nucleus, peroxisome 91.09 90.33
Solyc08g062370.2.1 Tomato cytoskeleton, cytosol, peroxisome 27.86 56.18
Solyc02g071430.2.1 Tomato cytosol 56.55 55.77
Solyc02g071490.2.1 Tomato cytosol 55.43 55.12
Solyc02g071500.2.1 Tomato cytosol 53.2 53.95
Solyc02g071440.2.1 Tomato cytosol 52.09 53.43
Solyc02g071360.2.1 Tomato cytosol 52.92 52.34
Solyc02g071470.2.1 Tomato cytosol 51.53 51.39
Solyc02g071400.2.1 Tomato cytosol 48.47 51.18
Solyc02g071450.2.1 Tomato cytosol 51.25 51.11
Solyc02g071410.2.1 Tomato cytosol 50.7 50.56
Solyc02g071480.2.1 Tomato cytosol, nucleus, peroxisome 47.91 50.29
GSMUA_Achr11P... Banana plastid 45.13 47.09
TraesCS4B01G374300.1 Wheat cytosol 44.29 45.56
GSMUA_AchrUn_... Banana cytosol, peroxisome 35.93 45.42
TraesCS4D01G363100.1 Wheat cytosol 43.73 44.99
TraesCS5A01G539700.2 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole 42.34 44.19
Os10t0558200-00 Rice cytosol 42.9 44.0
Os01t0351800-01 Rice cytosol 41.78 43.6
TraesCS4D01G363300.1 Wheat cytosol 41.23 43.4
TraesCS4D01G363200.1 Wheat cytosol 41.78 43.1
GSMUA_AchrUn_... Banana cytosol, peroxisome 25.63 42.99
TraesCS4B01G374200.1 Wheat cytosol 41.5 42.82
TraesCS5A01G539800.1 Wheat cytosol 41.5 42.82
TraesCS5A01G539900.1 Wheat cytosol 37.88 42.77
TraesCS3D01G529900.1 Wheat cytosol 41.78 42.73
GSMUA_Achr5P20940_001 Banana cytosol 42.62 42.62
GSMUA_Achr11P... Banana cytosol 42.06 42.54
EER95699 Sorghum cytosol 41.78 42.25
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 41.78 42.25
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 41.5 42.09
Os10t0558900-01 Rice cytosol 32.59 42.09
Zm00001d048547_P001 Maize cytosol, peroxisome, plastid 41.5 41.74
TraesCS3A01G524700.1 Wheat cytosol 40.67 41.6
GSMUA_Achr11P... Banana cytosol 40.95 41.29
GSMUA_Achr11P... Banana cytosol 29.25 40.86
TraesCS3D01G013500.1 Wheat mitochondrion 19.22 40.83
TraesCS4D01G363000.1 Wheat cytosol 40.67 40.78
Os01t0352100-01 Rice cytosol 39.55 40.57
Zm00001d040597_P001 Maize cytosol 40.11 40.45
Os09t0354100-00 Rice cytosol, peroxisome 32.31 40.42
HORVU4Hr1G088340.42 Barley cytosol 41.78 40.32
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 39.55 40.0
TraesCS3B01G592000.1 Wheat cytosol 42.06 39.84
Os10t0559500-01 Rice cytosol 39.83 39.72
Os10t0558750-01 Rice cytosol, nucleus, peroxisome 30.64 39.43
EES02838 Sorghum cytosol 38.72 39.38
HORVU2Hr1G010950.3 Barley cytoskeleton, cytosol, peroxisome 39.55 39.34
TraesCS2D01G063700.1 Wheat cytoskeleton, cytosol, peroxisome 39.55 39.01
EES15940 Sorghum cytosol 38.72 38.83
TraesCS3A01G477000.2 Wheat cytosol 37.88 38.64
EER91935 Sorghum cytosol 38.72 38.61
TraesCS2A01G065600.1 Wheat cytoskeleton, cytosol, peroxisome 39.28 38.52
TraesCS2D01G063800.1 Wheat cytoskeleton, cytosol, peroxisome 39.28 38.52
HORVU2Hr1G010930.2 Barley cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 38.72 38.5
Solyc01g067620.2.1 Tomato nucleus 38.72 38.29
TraesCS2B01G077500.1 Wheat cytoskeleton, cytosol, peroxisome 38.72 38.29
HORVU2Hr1G010960.1 Barley cytosol, mitochondrion, peroxisome 38.16 38.27
Os10t0558700-02 Rice cytosol, nucleus, peroxisome 37.88 38.1
Zm00001d041086_P001 Maize cytosol 37.88 38.1
TraesCS2B01G077600.1 Wheat cytosol 39.0 38.04
TraesCS2D01G063400.1 Wheat cytosol 39.0 38.04
TraesCS2D01G064000.1 Wheat cytosol 28.69 38.01
TraesCS3D01G403000.1 Wheat cytosol 39.0 37.94
KXG37089 Sorghum cytosol 37.88 37.88
TraesCS2A01G065500.1 Wheat cytosol 38.72 37.87
TraesCS2D01G063600.1 Wheat cytosol 38.72 37.87
TraesCS1D01G222800.1 Wheat cytosol 37.33 37.85
KXG37090 Sorghum cytosol 38.16 37.85
TraesCS4B01G374100.2 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 42.34 37.81
TraesCS3D01G471500.2 Wheat cytosol 37.05 37.78
HORVU1Hr1G056210.5 Barley cytosol 37.33 37.75
TraesCS2A01G065800.1 Wheat cytosol 38.44 37.7
TraesCS2B01G077800.1 Wheat cytosol 38.44 37.7
TraesCS2D01G064100.1 Wheat cytosol 38.44 37.7
Zm00001d029218_P001 Maize cytosol, peroxisome, plastid 32.31 37.66
OQU92563 Sorghum cytosol 39.0 37.63
EER91934 Sorghum cytosol 37.6 37.6
KXG34760 Sorghum cytosol 37.6 37.6
TraesCS2D01G063500.1 Wheat cytosol 38.44 37.5
TraesCS3A01G407800.1 Wheat cytosol 38.44 37.4
Zm00001d012819_P001 Maize cytosol 37.88 37.36
TraesCS1A01G221200.1 Wheat cytosol 36.77 37.29
TraesCS3A01G407900.1 Wheat cytosol 38.16 37.23
KXG32356 Sorghum plastid 35.93 37.18
TraesCS3B01G440500.1 Wheat cytosol 38.16 37.13
EES08209 Sorghum cytosol 37.6 36.89
Os03t0439500-01 Rice cytosol 38.16 36.83
TraesCS1B01G234500.1 Wheat plastid 27.02 36.74
TraesCS2A01G065300.1 Wheat cytosol 37.6 36.68
TraesCS2A01G065400.1 Wheat cytosol 37.6 36.68
HORVU3Hr1G091210.2 Barley cytosol 37.88 36.56
TraesCS4B01G335300.2 Wheat cytosol 36.77 36.36
TraesCS1A01G331300.1 Wheat cytosol 35.65 36.26
OQU92296 Sorghum cytosol 36.21 36.21
Solyc10g086780.1.1 Tomato cytosol 31.2 36.13
HORVU4Hr1G080610.2 Barley cytosol 36.49 36.09
TraesCSU01G044600.1 Wheat mitochondrion 20.61 35.92
EES02842 Sorghum cytosol 38.44 35.84
Os03t0856000-01 Rice cytosol 35.65 35.36
Os10t0558400-00 Rice cytosol, peroxisome 38.72 35.01
Zm00001d029636_P001 Maize extracellular 35.1 35.0
TraesCS5A01G457300.1 Wheat cytosol 33.43 34.58
TraesCS4D01G330600.1 Wheat cytosol 34.82 34.34
TraesCSU01G175100.1 Wheat cytosol 30.92 34.26
TraesCS5D01G468100.1 Wheat cytosol 33.7 34.18
TraesCS3B01G520100.3 Wheat cytosol 36.77 34.02
EES12050 Sorghum cytosol 33.15 33.62
TraesCS5B01G466400.1 Wheat cytosol 33.15 33.62
TraesCS1B01G345200.1 Wheat cytosol 33.7 33.61
TraesCS1A01G331400.1 Wheat cytosol, peroxisome, plastid 35.65 32.99
Solyc06g068270.2.1 Tomato nucleus 32.31 32.68
Solyc10g076840.1.1 Tomato cytosol 31.2 32.28
Solyc07g045040.2.1 Tomato cytosol 31.48 32.1
OQU92565 Sorghum mitochondrion, plastid 24.51 31.65
KXG19500 Sorghum cytosol, endoplasmic reticulum, peroxisome 39.28 31.61
HORVU3Hr1G104290.2 Barley plastid 37.05 31.22
TraesCS1D01G333300.1 Wheat cytosol 28.41 31.1
KXG39676 Sorghum cytosol, endoplasmic reticulum, peroxisome 34.54 31.0
Os09t0353700-00 Rice cytosol, peroxisome, plastid 33.7 29.8
HORVU1Hr1G077370.1 Barley plastid 34.26 29.15
Zm00001d041087_P001 Maize cytosol 35.93 26.99
GSMUA_AchrUn_... Banana mitochondrion 33.98 19.77
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13ncoils:CoilInterPro:DIOX_NGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114
InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443UniProt:K4B8B4InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171
PFAM:PF14226PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF168SUPFAM:SSF51197EnsemblPlantsGene:Solyc02g071380.2
EnsemblPlants:Solyc02g071380.2.1UniParc:UPI0002768E04::::
Description
No Description!
Coordinates
chr2:-:40852676..40857726
Molecular Weight (calculated)
41067.3 Da
IEP (calculated)
5.361
GRAVY (calculated)
-0.425
Length
359 amino acids
Sequence
(BLAST)
001: MRDIEVKYME VPSVQELAKK KLVSIPSRYV RDDQDRSIAS SIYKEVPVID MQRLINFNDH DSMNLELNKL HLAAKDWGFF QLINHGVSCS VVEKMKDETQ
101: KFFDLPLEEK KKFEKSSGDT DGFGQLFVVS DEQKLDWADL FYLKTSPTYL RKPVFSKLYL SLRETIEEYA DEIKKLSMRV LETLGKALGI DEDEVKSVFK
201: EGMQSMRMNY YPPCPQPEKV MGLTPHSDAT GLTILLQVNE TQGLQIKKDG IWIPIEPLPN AFIVNVGDAF EIFSNGIYKS IEHRSVVSSE KERISVATFQ
301: SPRLDGILGP SSSLVTPQNP PKFKKIGVTQ FYKGFFTREL DGKSYVDTMR ITNEDDLNN
Best Arabidopsis Sequence Match ( AT1G17010.1 )
(BLAST)
001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.