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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • peroxisome 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU92296 Sorghum cytosol 70.34 69.36
Os03t0439500-01 Rice cytosol 62.71 59.68
KXG39676 Sorghum cytosol, endoplasmic reticulum, peroxisome 62.71 55.5
GSMUA_AchrUn_... Banana cytosol, peroxisome 35.03 43.66
GSMUA_AchrUn_... Banana cytosol, peroxisome 25.99 42.99
GSMUA_Achr11P... Banana cytosol 31.07 42.8
GSMUA_Achr11P... Banana cytosol 41.53 41.41
VIT_02s0012g00440.t01 Wine grape extracellular 15.25 41.22
EER91934 Sorghum cytosol 41.53 40.95
GSMUA_Achr5P20940_001 Banana cytosol 41.53 40.95
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 40.11 40.11
VIT_02s0012g00320.t01 Wine grape cytosol 30.79 39.93
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 39.83 39.72
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 39.83 39.72
VIT_02s0012g00450.t01 Wine grape cytosol, nucleus, peroxisome 39.55 39.66
GSMUA_Achr11P... Banana cytosol 39.83 39.61
EER91935 Sorghum cytosol 40.11 39.44
EES02838 Sorghum cytosol 38.98 39.09
OQU92563 Sorghum cytosol 40.96 38.98
KXG37089 Sorghum cytosol 38.7 38.16
KXG37090 Sorghum cytosol 38.98 38.12
VIT_02s0012g00360.t01 Wine grape cytosol 36.16 38.1
KXG32356 Sorghum plastid 37.29 38.04
EES08209 Sorghum cytosol 39.27 37.98
EES02842 Sorghum cytosol 40.96 37.66
VIT_02s0012g00390.t01 Wine grape cytosol 37.01 37.11
KRH21858 Soybean cytosol 37.29 36.97
Bra010470.1-P Field mustard cytosol 27.4 36.33
AT1G17020.1 Thale cress cytosol 36.72 36.31
EES15940 Sorghum cytosol 36.44 36.03
Bra010472.1-P Field mustard cytosol 36.16 35.75
AT1G17010.1 Thale cress cytosol 36.44 35.73
AT1G78550.1 Thale cress cytosol, nucleus, peroxisome 35.88 35.67
AT4G25300.1 Thale cress cytosol 35.88 35.67
EER95699 Sorghum cytosol 35.59 35.49
Bra010469.1-P Field mustard cytosol 35.03 35.43
KRH13456 Soybean cytosol 35.03 35.13
KXG34760 Sorghum cytosol 35.59 35.1
Bra019177.1-P Field mustard cytosol 35.03 35.03
VIT_02s0012g00400.t01 Wine grape cytosol, peroxisome, plastid 34.18 34.97
Bra035046.1-P Field mustard cytosol 35.31 34.92
KRH27437 Soybean cytosol 35.31 34.92
Solyc02g071430.2.1 Tomato cytosol 35.88 34.89
AT4G25310.1 Thale cress cytosol 34.75 34.84
KRH27439 Soybean cytosol 35.03 34.54
PGSC0003DMT400007989 Potato cytosol 35.31 34.44
PGSC0003DMT400007999 Potato cytosol 34.46 34.37
Bra026693.1-P Field mustard cytosol 34.75 34.36
EES04177 Sorghum cytosol 35.88 34.32
Solyc08g062370.2.1 Tomato cytoskeleton, cytosol, peroxisome 17.23 34.27
Solyc02g071360.2.1 Tomato cytosol 35.03 34.16
VIT_02s0012g00380.t01 Wine grape cytosol 25.71 34.08
PGSC0003DMT400055956 Potato cytosol 16.95 33.71
KRH43438 Soybean nucleus 25.71 33.7
Bra026008.1-P Field mustard cytosol, nucleus, peroxisome 32.77 33.62
PGSC0003DMT400007963 Potato cytosol 34.75 33.61
Bra026695.1-P Field mustard cytosol, nucleus, peroxisome 31.92 33.24
PGSC0003DMT400007992 Potato cytosol, nucleus, peroxisome 33.9 33.15
KRH58590 Soybean cytosol 33.62 33.15
Solyc02g071380.2.1 Tomato cytosol, nucleus, peroxisome 33.62 33.15
KRH75184 Soybean cytosol 23.16 32.93
PGSC0003DMT400018673 Potato cytosol 25.99 32.86
PGSC0003DMT400008001 Potato cytosol 33.05 32.68
Solyc02g071400.2.1 Tomato cytosol 31.36 32.65
VIT_02s0012g00350.t01 Wine grape cytosol 31.64 32.37
KRH42495 Soybean cytosol 32.49 32.3
VIT_02s0012g00410.t01 Wine grape plastid 31.36 32.08
KRH21128 Soybean cytosol 24.86 32.0
Solyc02g071440.2.1 Tomato cytosol 31.64 32.0
KRH71025 Soybean cytosol 31.92 31.74
Solyc02g071500.2.1 Tomato cytosol 31.64 31.64
KRH75001 Soybean cytosol 30.79 31.14
Solyc02g071470.2.1 Tomato cytosol 31.64 31.11
PGSC0003DMT400018663 Potato cytosol 31.64 31.02
Solyc02g071490.2.1 Tomato cytosol 31.64 31.02
KRH71023 Soybean cytosol 31.36 31.01
OQU92565 Sorghum mitochondrion, plastid 24.29 30.94
PGSC0003DMT400059406 Potato peroxisome 21.19 30.74
PGSC0003DMT400007990 Potato nucleus 18.64 30.56
KRH11118 Soybean cytosol, nucleus, peroxisome, plastid 31.92 30.38
Solyc02g071450.2.1 Tomato cytosol 30.79 30.28
Solyc02g071410.2.1 Tomato cytosol 30.23 29.72
Solyc02g071480.2.1 Tomato cytosol, nucleus, peroxisome 28.53 29.53
KRH71028 Soybean cytosol 30.23 29.4
EER89306 Sorghum cytosol 29.66 29.25
KRG89247 Soybean cytosol, peroxisome, plastid 19.49 29.24
EER88660 Sorghum cytosol 30.23 29.16
KXG19500 Sorghum cytosol, endoplasmic reticulum, peroxisome 36.72 29.15
PGSC0003DMT400018670 Potato cytosol 28.53 28.94
KRH58593 Soybean cytosol, peroxisome, plastid 29.66 28.93
OQU75951 Sorghum cytosol 28.25 28.9
KXG29110 Sorghum cytosol 29.66 28.85
KXG19442 Sorghum cytosol 29.66 28.46
KRH49750 Soybean cytosol 27.4 27.64
KRH49748 Soybean cytosol 28.25 27.32
KRG89246 Soybean cytosol 27.68 27.15
EER87956 Sorghum peroxisome 27.68 27.0
Bra013884.1-P Field mustard cytosol 31.92 25.74
EER87955 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 28.25 25.64
EER87960 Sorghum cytosol 12.71 25.57
GSMUA_AchrUn_... Banana mitochondrion 34.46 19.77
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13EntrezGene:8072022UniProt:C5YF79InterPro:DIOX_NEnsemblPlants:EES12050
ProteinID:EES12050ProteinID:EES12050.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114InterPro:IPNS-likeInterPro:IPR005123
InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226PFscan:PS51471PANTHER:PTHR10209
PANTHER:PTHR10209:SF375EnsemblPlantsGene:SORBI_3006G057300SUPFAM:SSF51197unigene:Sbi.1500UniParc:UPI0001A872A0RefSeq:XP_002447722.1
Description
hypothetical protein
Coordinates
chr6:-:40242354..40244140
Molecular Weight (calculated)
39201.8 Da
IEP (calculated)
6.237
GRAVY (calculated)
-0.204
Length
354 amino acids
Sequence
(BLAST)
001: MEAATASNKI VNRDEITDAF TDSAQIPEKY IRTDEVRAGV VVGEDDDCYC ELPVVDMARL LDPELSASET LKLGSACRNW GFFQLTNHGV DEGVIQHMKD
101: NTADFFGLPL DSKNAVAVRG DGFEGYGHHY SRLSKLDWAE SVILITQPVQ DRNMELWPTN PPTFRHALDR YSAETTSLIR RLLSYMAADL GVGEAALLDA
201: FSGKRQSMAI HHYPACRHPD KVMGNTAHTD GLGLTVLLHV DDTPGLQMLR GGRWFPVRPL PGALVVNVGD ILHIVTNGAY KSVQHRVLVN AERGRTTAVV
301: FQDASVDGMV TPLPELLLKA GEAPRYRSIP RFEYLKVRFS ALAKREGFLE SLKL
Best Arabidopsis Sequence Match ( AT1G17010.1 )
(BLAST)
001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.