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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • cytosol 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os10t0558400-00 Rice cytosol, peroxisome 72.22 65.49
EES02838 Sorghum cytosol 59.44 60.62
KXG32356 Sorghum plastid 56.94 59.08
EES02842 Sorghum cytosol 63.06 58.96
OQU92563 Sorghum cytosol 59.44 57.53
GSMUA_Achr11P... Banana cytosol 39.17 54.86
GSMUA_AchrUn_... Banana cytosol, peroxisome 43.06 54.58
GSMUA_Achr5P20940_001 Banana cytosol 53.06 53.2
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 52.22 53.11
GSMUA_Achr11P... Banana cytosol 52.22 52.96
GSMUA_AchrUn_... Banana cytosol, peroxisome 31.11 52.34
GSMUA_Achr11P... Banana cytosol 51.11 51.69
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 50.56 51.27
KXG19500 Sorghum cytosol, endoplasmic reticulum, peroxisome 63.33 51.12
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 49.72 50.42
EER91934 Sorghum cytosol 50.28 50.42
VIT_02s0012g00320.t01 Wine grape cytosol 38.06 50.18
VIT_02s0012g00450.t01 Wine grape cytosol, nucleus, peroxisome 48.61 49.58
VIT_02s0012g00390.t01 Wine grape cytosol 47.78 48.73
VIT_02s0012g00360.t01 Wine grape cytosol 44.72 47.92
OQU92565 Sorghum mitochondrion, plastid 36.67 47.48
EER95699 Sorghum cytosol 46.67 47.32
VIT_02s0012g00400.t01 Wine grape cytosol, peroxisome, plastid 45.28 47.11
KXG37090 Sorghum cytosol 46.11 45.86
KXG37089 Sorghum cytosol 45.28 45.4
EES08209 Sorghum cytosol 46.11 45.36
KXG34760 Sorghum cytosol 45.0 45.13
KRH71023 Soybean cytosol 44.44 44.69
KRH75184 Soybean cytosol 30.83 44.58
VIT_02s0012g00350.t01 Wine grape cytosol 42.5 44.22
Bra010470.1-P Field mustard cytosol 32.5 43.82
VIT_02s0012g00410.t01 Wine grape plastid 41.94 43.64
VIT_02s0012g00440.t01 Wine grape extracellular 15.83 43.51
KRH75001 Soybean cytosol 42.22 43.43
KRH27437 Soybean cytosol 42.78 43.02
KRH13456 Soybean cytosol 41.94 42.78
Bra026693.1-P Field mustard cytosol 42.5 42.74
KRH71025 Soybean cytosol 41.94 42.42
Bra019177.1-P Field mustard cytosol 41.67 42.37
KRH71028 Soybean cytosol 42.78 42.31
AT4G25310.1 Thale cress cytosol 41.39 42.21
AT1G17020.1 Thale cress cytosol 41.94 42.18
EES15940 Sorghum cytosol 41.94 42.18
AT4G25300.1 Thale cress cytosol 41.11 41.57
VIT_02s0012g00380.t01 Wine grape cytosol 30.83 41.57
KRH21858 Soybean cytosol 40.83 41.18
KRH43438 Soybean nucleus 30.83 41.11
AT1G17010.1 Thale cress cytosol 41.11 41.0
Solyc02g071430.2.1 Tomato cytosol 41.39 40.93
PGSC0003DMT400007989 Potato cytosol 41.11 40.77
KRH42495 Soybean cytosol 40.28 40.73
KRH58590 Soybean cytosol 40.56 40.67
Bra010472.1-P Field mustard cytosol 40.28 40.5
Bra010469.1-P Field mustard cytosol 39.17 40.29
Bra035046.1-P Field mustard cytosol 40.0 40.22
Solyc02g071360.2.1 Tomato cytosol 40.56 40.22
AT1G78550.1 Thale cress cytosol, nucleus, peroxisome 39.72 40.17
EES12050 Sorghum cytosol 39.44 40.11
Solyc02g071500.2.1 Tomato cytosol 39.44 40.11
PGSC0003DMT400008001 Potato cytosol 39.72 39.94
KRH27439 Soybean cytosol 39.72 39.83
PGSC0003DMT400007999 Potato cytosol 39.17 39.72
PGSC0003DMT400018673 Potato cytosol 30.83 39.64
PGSC0003DMT400007963 Potato cytosol 40.0 39.34
Solyc08g062370.2.1 Tomato cytoskeleton, cytosol, peroxisome 19.44 39.33
OQU92296 Sorghum cytosol 39.17 39.28
KRH21128 Soybean cytosol 30.0 39.27
Solyc02g071440.2.1 Tomato cytosol 38.06 39.14
PGSC0003DMT400055956 Potato cytosol 19.17 38.76
Solyc02g071380.2.1 Tomato cytosol, nucleus, peroxisome 38.61 38.72
PGSC0003DMT400007992 Potato cytosol, nucleus, peroxisome 38.89 38.67
Bra026695.1-P Field mustard cytosol, nucleus, peroxisome 36.39 38.53
EES04177 Sorghum cytosol 39.44 38.38
Solyc02g071400.2.1 Tomato cytosol 35.83 37.94
PGSC0003DMT400018663 Potato cytosol 37.78 37.67
KRH11118 Soybean cytosol, nucleus, peroxisome, plastid 38.89 37.63
Solyc02g071490.2.1 Tomato cytosol 37.5 37.4
Bra026008.1-P Field mustard cytosol, nucleus, peroxisome 35.83 37.39
Solyc02g071410.2.1 Tomato cytosol 37.22 37.22
Solyc02g071480.2.1 Tomato cytosol, nucleus, peroxisome 35.0 36.84
Solyc02g071450.2.1 Tomato cytosol 36.67 36.67
KRH58593 Soybean cytosol, peroxisome, plastid 36.94 36.64
KRG89247 Soybean cytosol, peroxisome, plastid 23.89 36.44
KRG89246 Soybean cytosol 36.39 36.29
KRH49750 Soybean cytosol 35.28 36.18
KRH49748 Soybean cytosol 36.67 36.07
Solyc02g071470.2.1 Tomato cytosol 35.83 35.83
KXG39676 Sorghum cytosol, endoplasmic reticulum, peroxisome 39.44 35.5
KXG29110 Sorghum cytosol 35.83 35.44
PGSC0003DMT400059406 Potato peroxisome 23.89 35.25
PGSC0003DMT400007990 Potato nucleus 21.11 35.19
EER89306 Sorghum cytosol 34.72 34.82
PGSC0003DMT400018670 Potato cytosol 33.61 34.67
OQU75951 Sorghum cytosol 33.06 34.39
EER87960 Sorghum cytosol 16.39 33.52
EER88660 Sorghum cytosol 34.17 33.52
KXG19442 Sorghum cytosol 33.89 33.06
EER87956 Sorghum peroxisome 31.39 31.13
Bra013884.1-P Field mustard cytosol 37.22 30.52
EER87955 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 31.94 29.49
GSMUA_AchrUn_... Banana mitochondrion 45.0 26.26
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13EntrezGene:8058082UniProt:C5WSD3InterPro:DIOX_NEnsemblPlants:EER91935
ProteinID:EER91935ProteinID:EER91935.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114InterPro:IPNS-likeInterPro:IPR005123
InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226PFscan:PS51471PANTHER:PTHR10209
PANTHER:PTHR10209:SF204EnsemblPlantsGene:SORBI_3001G299200SUPFAM:SSF51197UniParc:UPI0001A824B5RefSeq:XP_002464937.1:
Description
hypothetical protein
Coordinates
chr1:+:58034847..58036588
Molecular Weight (calculated)
40487.2 Da
IEP (calculated)
6.057
GRAVY (calculated)
-0.346
Length
360 amino acids
Sequence
(BLAST)
001: MAHARAAGSL PVANVQELAQ TCSRSDEQVP ERYIRAEANT EDVITGYANS SATAIPIIDL SKLYDPQSSH EECSKLGSAC QQWGFFQLIN HGVPDEVICN
101: LREDIAEFFN LPLETKKAYS QLPNGLEGYG QVFVVSEEQK LDWADMFYLV VRPNEARDLR FWPAHPPSFR TSIDRYSLEA AKVARCLLEF MAKDMGAEPA
201: SLLEMFQGQP QGFRMNYYPP CRQANQVLGM SPHTDAAGLT LLLQVNGMPG LQIRRDGKWF TVNALEGALV VNVGDVLEIL SNGRYRSVEH RAVVHPNRER
301: ISAAVFHRPC QDAVIGPLPE LLNDSSKPRY KAMGYMEFMK RYYSAKLDGR NHLESLRNEL
Best Arabidopsis Sequence Match ( AT1G17020.1 )
(BLAST)
001: MEAKGAAQWS SILVPSVQEM VKEKTITTVP PRYVRSDQDK TEVDDDFDVK IEIPIIDMKR LCSSTTMDSE VEKLDFACKE WGFFQLVNHG IDSSFLDKVK
101: SEIQDFFNLP MEEKKKFWQR PDEIEGFGQA FVVSEDQKLD WADLFFHTVQ PVELRKPHLF PKLPLPFRDT LEMYSSEVQS VAKILIAKMA RALEIKPEEL
201: EKLFDDVDSV QSMRMNYYPP CPQPDQVIGL TPHSDSVGLT VLMQVNDVEG LQIKKDGKWV PVKPLPNAFI VNIGDVLEII TNGTYRSIEH RGVVNSEKER
301: LSIATFHNVG MYKEVGPAKS LVERQKVARF KRLTMKEYND GLFSRTLDGK AYLDALRI
Arabidopsis Description
SRG1Protein SRG1 [Source:UniProtKB/Swiss-Prot;Acc:Q39224]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.