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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • peroxisome 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os10t0559500-01 Rice cytosol 75.21 75.0
TraesCS1A01G221200.1 Wheat cytosol 72.42 73.45
TraesCS1D01G222800.1 Wheat cytosol 72.42 73.45
HORVU1Hr1G056210.5 Barley cytosol 72.42 73.24
TraesCS1B01G234500.1 Wheat plastid 48.75 66.29
GSMUA_Achr11P... Banana cytosol 40.95 57.2
GSMUA_AchrUn_... Banana cytosol, peroxisome 43.73 55.28
GSMUA_AchrUn_... Banana cytosol, peroxisome 32.59 54.67
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 53.76 54.52
GSMUA_Achr11P... Banana cytosol 53.76 54.37
GSMUA_Achr11P... Banana cytosol 53.48 53.93
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 53.2 53.8
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 53.2 53.8
GSMUA_Achr5P20940_001 Banana cytosol 51.25 51.25
EER91935 Sorghum cytosol 50.42 50.28
EES02838 Sorghum cytosol 47.35 48.16
VIT_02s0012g00450.t01 Wine grape cytosol, nucleus, peroxisome 46.24 47.03
VIT_02s0012g00320.t01 Wine grape cytosol 35.65 46.89
KXG32356 Sorghum plastid 44.01 45.53
EES08209 Sorghum cytosol 45.96 45.08
OQU92563 Sorghum cytosol 46.52 44.89
VIT_02s0012g00360.t01 Wine grape cytosol 41.78 44.64
KXG37089 Sorghum cytosol 44.57 44.57
EER95699 Sorghum cytosol 43.73 44.23
KXG37090 Sorghum cytosol 44.29 43.92
VIT_02s0012g00390.t01 Wine grape cytosol 43.18 43.91
EES02842 Sorghum cytosol 47.08 43.9
VIT_02s0012g00440.t01 Wine grape extracellular 15.88 43.51
AT4G25310.1 Thale cress cytosol 42.62 43.34
Bra026693.1-P Field mustard cytosol 43.18 43.3
Bra010470.1-P Field mustard cytosol 32.03 43.07
VIT_02s0012g00400.t01 Wine grape cytosol, peroxisome, plastid 41.5 43.06
AT1G17020.1 Thale cress cytosol 42.9 43.02
Bra010472.1-P Field mustard cytosol 42.9 43.02
OQU92296 Sorghum cytosol 42.62 42.62
Solyc02g071430.2.1 Tomato cytosol 42.9 42.31
Bra035046.1-P Field mustard cytosol 42.06 42.18
AT4G25300.1 Thale cress cytosol 41.78 42.13
VIT_02s0012g00350.t01 Wine grape cytosol 40.11 41.62
EES12050 Sorghum cytosol 40.95 41.53
KRH75184 Soybean cytosol 28.69 41.37
KRH58590 Soybean cytosol 40.67 40.67
AT1G17010.1 Thale cress cytosol 40.67 40.44
KRH27439 Soybean cytosol 40.39 40.39
KXG34760 Sorghum cytosol 40.39 40.39
OQU92565 Sorghum mitochondrion, plastid 31.2 40.29
KRH43438 Soybean nucleus 30.08 40.0
KRH27437 Soybean cytosol 39.83 39.94
KRH71023 Soybean cytosol 39.83 39.94
KRH13456 Soybean cytosol 39.28 39.94
KRH71025 Soybean cytosol 39.55 39.89
Solyc08g062370.2.1 Tomato cytoskeleton, cytosol, peroxisome 19.78 39.89
Bra026695.1-P Field mustard cytosol, nucleus, peroxisome 37.6 39.71
AT1G78550.1 Thale cress cytosol, nucleus, peroxisome 39.28 39.61
Bra010469.1-P Field mustard cytosol 38.44 39.43
Bra026008.1-P Field mustard cytosol, nucleus, peroxisome 37.88 39.42
PGSC0003DMT400007963 Potato cytosol 40.11 39.34
KRH42495 Soybean cytosol 39.0 39.33
PGSC0003DMT400055956 Potato cytosol 19.5 39.33
VIT_02s0012g00380.t01 Wine grape cytosol 29.25 39.33
PGSC0003DMT400007989 Potato cytosol 39.55 39.12
Solyc02g071360.2.1 Tomato cytosol 39.55 39.12
EES15940 Sorghum cytosol 38.72 38.83
Solyc02g071400.2.1 Tomato cytosol 36.77 38.82
Bra019177.1-P Field mustard cytosol 38.16 38.7
KRH21858 Soybean cytosol 38.44 38.66
PGSC0003DMT400008001 Potato cytosol 38.44 38.55
VIT_02s0012g00410.t01 Wine grape plastid 37.05 38.44
KRH75001 Soybean cytosol 37.33 38.29
EES04177 Sorghum cytosol 39.28 38.11
PGSC0003DMT400007999 Potato cytosol 37.6 38.03
Solyc02g071380.2.1 Tomato cytosol, nucleus, peroxisome 37.6 37.6
PGSC0003DMT400007992 Potato cytosol, nucleus, peroxisome 37.6 37.29
Solyc02g071440.2.1 Tomato cytosol 36.21 37.14
Solyc02g071500.2.1 Tomato cytosol 36.49 37.01
Solyc02g071480.2.1 Tomato cytosol, nucleus, peroxisome 35.1 36.84
KRH71028 Soybean cytosol 37.33 36.81
KRH21128 Soybean cytosol 28.13 36.73
KRH11118 Soybean cytosol, nucleus, peroxisome, plastid 37.88 36.56
KRG89247 Soybean cytosol, peroxisome, plastid 23.96 36.44
KXG39676 Sorghum cytosol, endoplasmic reticulum, peroxisome 40.39 36.25
Solyc02g071450.2.1 Tomato cytosol 36.21 36.11
Solyc02g071470.2.1 Tomato cytosol 36.21 36.11
OQU75951 Sorghum cytosol 34.54 35.84
EER87960 Sorghum cytosol 17.55 35.8
PGSC0003DMT400018673 Potato cytosol 27.86 35.71
KXG19500 Sorghum cytosol, endoplasmic reticulum, peroxisome 44.29 35.65
KRH49750 Soybean cytosol 34.82 35.61
Solyc02g071410.2.1 Tomato cytosol 35.65 35.56
PGSC0003DMT400018663 Potato cytosol 35.65 35.46
KRH58593 Soybean cytosol, peroxisome, plastid 35.65 35.26
KRH49748 Soybean cytosol 35.93 35.25
Solyc02g071490.2.1 Tomato cytosol 35.38 35.18
KXG29110 Sorghum cytosol 35.65 35.16
KRG89246 Soybean cytosol 35.1 34.9
PGSC0003DMT400018670 Potato cytosol 33.43 34.38
EER88660 Sorghum cytosol 35.1 34.33
EER89306 Sorghum cytosol 34.26 34.26
PGSC0003DMT400007990 Potato nucleus 20.61 34.26
KXG19442 Sorghum cytosol 34.54 33.6
PGSC0003DMT400059406 Potato peroxisome 22.28 32.79
EER87956 Sorghum peroxisome 33.15 32.78
EER87955 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 33.15 30.51
Bra013884.1-P Field mustard cytosol 35.38 28.93
GSMUA_AchrUn_... Banana mitochondrion 44.85 26.09
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13EntrezGene:8058081UniProt:C5WSD2InterPro:DIOX_NEnsemblPlants:EER91934
ProteinID:EER91934ProteinID:EER91934.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114InterPro:IPNS-likeInterPro:IPR005123
InterPro:IPR027443ProteinID:OQU92145.1InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226PFscan:PS51471
PANTHER:PTHR10209PANTHER:PTHR10209:SF158EnsemblPlantsGene:SORBI_3001G299100SUPFAM:SSF51197UniParc:UPI0001A824B4RefSeq:XP_002464936.1
Description
hypothetical protein
Coordinates
chr1:+:58009649..58012286
Molecular Weight (calculated)
40586.8 Da
IEP (calculated)
5.289
GRAVY (calculated)
-0.133
Length
359 amino acids
Sequence
(BLAST)
001: MAEIFEKMEV EFVDQDESVQ VVADNIRDTG EVPERYVRSE IKSDPVIIDA EGYNLPVIDM SRLLNPDFSE EETAKLGSAC EHWGFFQLVN HGIDVGLLQQ
101: IKADITKFFS LPLEEKLAVA IPPNGIEGFG HHFVFSKEQK LDWVDILFLA TRPIEQRNLS FWPAKPSTFR DTLDKYSLQL SNVSAQLFKF MANNLGVDQE
201: VFLSTFKGLP QSVRINYYPP CSQADRVLGL SPHTDGVGMT FLLHVNDVEG LQIRKDGKWF SVQAMHGALV VNIGDIIEIL TNGRYKSVEH RAVINPNKER
301: ITIAAFQSIH LFCKIGPLQE LLTADKARYK VMDGVEFTKG YFAAKLEGRR YLESLKLGL
Best Arabidopsis Sequence Match ( AT1G17020.1 )
(BLAST)
001: MEAKGAAQWS SILVPSVQEM VKEKTITTVP PRYVRSDQDK TEVDDDFDVK IEIPIIDMKR LCSSTTMDSE VEKLDFACKE WGFFQLVNHG IDSSFLDKVK
101: SEIQDFFNLP MEEKKKFWQR PDEIEGFGQA FVVSEDQKLD WADLFFHTVQ PVELRKPHLF PKLPLPFRDT LEMYSSEVQS VAKILIAKMA RALEIKPEEL
201: EKLFDDVDSV QSMRMNYYPP CPQPDQVIGL TPHSDSVGLT VLMQVNDVEG LQIKKDGKWV PVKPLPNAFI VNIGDVLEII TNGTYRSIEH RGVVNSEKER
301: LSIATFHNVG MYKEVGPAKS LVERQKVARF KRLTMKEYND GLFSRTLDGK AYLDALRI
Arabidopsis Description
SRG1Protein SRG1 [Source:UniProtKB/Swiss-Prot;Acc:Q39224]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.