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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG37089 Sorghum cytosol 89.07 90.81
KXG37090 Sorghum cytosol 87.16 88.12
Zm00001d012819_P001 Maize cytosol 84.15 84.62
TraesCS3D01G013500.1 Wheat mitochondrion 32.51 70.41
TraesCSU01G044600.1 Wheat mitochondrion 37.16 66.02
TraesCSU01G175100.1 Wheat cytosol 58.2 65.74
HORVU3Hr1G091210.2 Barley cytosol 65.3 64.25
TraesCS3A01G407800.1 Wheat cytosol 64.75 64.23
TraesCS3B01G440500.1 Wheat cytosol 63.93 63.41
TraesCS3A01G407900.1 Wheat cytosol 63.66 63.32
Os03t0856000-01 Rice cytosol 62.57 63.26
TraesCS3D01G403000.1 Wheat cytosol 63.66 63.14
VIT_02s0012g00320.t01 Wine grape cytosol 37.16 49.82
EER95699 Sorghum cytosol 46.72 48.17
EES02838 Sorghum cytosol 46.17 47.88
VIT_02s0012g00450.t01 Wine grape cytosol, nucleus, peroxisome 45.9 47.59
EES15940 Sorghum cytosol 46.17 47.21
VIT_02s0012g00390.t01 Wine grape cytosol 44.81 46.46
KXG32356 Sorghum plastid 43.99 46.4
EER91935 Sorghum cytosol 45.36 46.11
EER91934 Sorghum cytosol 45.08 45.96
Bra010470.1-P Field mustard cytosol 33.33 45.69
VIT_02s0012g00360.t01 Wine grape cytosol 41.26 44.94
VIT_02s0012g00400.t01 Wine grape cytosol, peroxisome, plastid 42.35 44.8
KXG34760 Sorghum cytosol 42.9 43.73
OQU92563 Sorghum cytosol 44.26 43.55
VIT_02s0012g00440.t01 Wine grape extracellular 15.57 43.51
AT4G25310.1 Thale cress cytosol 41.8 43.34
AT1G17020.1 Thale cress cytosol 42.35 43.3
VIT_02s0012g00350.t01 Wine grape cytosol 40.71 43.06
Bra026693.1-P Field mustard cytosol 41.53 42.46
PGSC0003DMT400007989 Potato cytosol 42.08 42.42
Solyc02g071360.2.1 Tomato cytosol 41.8 42.15
AT4G25300.1 Thale cress cytosol 40.98 42.13
CDY69556 Canola cytosol 4.37 42.11
Solyc02g071430.2.1 Tomato cytosol 41.8 42.03
Bra010472.1-P Field mustard cytosol 40.71 41.62
KRH21858 Soybean cytosol 40.44 41.46
Bra010469.1-P Field mustard cytosol 39.62 41.43
KRH13456 Soybean cytosol 39.89 41.36
EES02842 Sorghum cytosol 43.44 41.3
AT1G17010.1 Thale cress cytosol 40.71 41.27
EES04177 Sorghum cytosol 41.53 41.08
KRH27437 Soybean cytosol 40.16 41.06
Bra019177.1-P Field mustard cytosol 39.62 40.96
KRH42495 Soybean cytosol 39.62 40.73
PGSC0003DMT400007963 Potato cytosol 40.71 40.71
KRH58590 Soybean cytosol 39.89 40.67
Bra026695.1-P Field mustard cytosol, nucleus, peroxisome 37.7 40.59
AT1G78550.1 Thale cress cytosol, nucleus, peroxisome 39.34 40.45
VIT_02s0012g00410.t01 Wine grape plastid 37.98 40.17
KRH75184 Soybean cytosol 27.05 39.76
VIT_02s0012g00380.t01 Wine grape cytosol 28.96 39.7
Bra035046.1-P Field mustard cytosol 38.8 39.66
KRH27439 Soybean cytosol 38.8 39.55
Bra026008.1-P Field mustard cytosol, nucleus, peroxisome 37.16 39.42
Solyc02g071400.2.1 Tomato cytosol 36.61 39.41
OQU92296 Sorghum cytosol 38.52 39.28
EES12050 Sorghum cytosol 37.98 39.27
KRH71023 Soybean cytosol 38.25 39.11
KRH71025 Soybean cytosol 37.98 39.04
PGSC0003DMT400018663 Potato cytosol 38.25 38.78
KRH75001 Soybean cytosol 36.89 38.57
Solyc02g071490.2.1 Tomato cytosol 37.98 38.5
PGSC0003DMT400008001 Potato cytosol 37.43 38.27
Solyc02g071440.2.1 Tomato cytosol 36.34 38.0
PGSC0003DMT400018673 Potato cytosol 28.96 37.86
PGSC0003DMT400007992 Potato cytosol, nucleus, peroxisome 37.43 37.85
KRH43438 Soybean nucleus 27.87 37.78
KRH71028 Soybean cytosol 37.43 37.64
Solyc02g071380.2.1 Tomato cytosol, nucleus, peroxisome 36.89 37.6
PGSC0003DMT400007999 Potato cytosol 36.34 37.46
Solyc02g071500.2.1 Tomato cytosol 36.07 37.29
Solyc08g062370.2.1 Tomato cytoskeleton, cytosol, peroxisome 18.03 37.08
PGSC0003DMT400055956 Potato cytosol 17.76 36.52
Solyc02g071470.2.1 Tomato cytosol 35.79 36.39
KRH11118 Soybean cytosol, nucleus, peroxisome, plastid 36.61 36.02
Solyc02g071450.2.1 Tomato cytosol 35.25 35.83
Solyc02g071480.2.1 Tomato cytosol, nucleus, peroxisome 33.33 35.67
KRG89247 Soybean cytosol, peroxisome, plastid 22.95 35.59
Solyc02g071410.2.1 Tomato cytosol 34.97 35.56
KRH49748 Soybean cytosol 35.52 35.52
KRH49750 Soybean cytosol 33.88 35.33
PGSC0003DMT400018670 Potato cytosol 33.61 35.24
KRG89246 Soybean cytosol 34.7 35.18
KRH58593 Soybean cytosol, peroxisome, plastid 34.7 34.99
KRH21128 Soybean cytosol 25.96 34.55
OQU75951 Sorghum cytosol 32.51 34.39
EER89306 Sorghum cytosol 33.61 34.26
PGSC0003DMT400007990 Potato nucleus 20.22 34.26
KXG19500 Sorghum cytosol, endoplasmic reticulum, peroxisome 41.53 34.08
KXG29110 Sorghum cytosol 33.88 34.07
EER88660 Sorghum cytosol 33.88 33.79
KXG39676 Sorghum cytosol, endoplasmic reticulum, peroxisome 36.61 33.5
OQU92565 Sorghum mitochondrion, plastid 25.41 33.45
PGSC0003DMT400059406 Potato peroxisome 21.86 32.79
Bra013884.1-P Field mustard cytosol 38.25 31.89
EER87956 Sorghum peroxisome 30.05 30.3
KXG19442 Sorghum cytosol 30.05 29.81
EER87960 Sorghum cytosol 14.21 29.55
EER87955 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 30.87 28.97
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13EntrezGene:8057114UniProt:C5Y7A6InterPro:DIOX_NEnsemblPlants:EES08209
ProteinID:EES08209ProteinID:EES08209.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114InterPro:IPNS-likeInterPro:IPR005123
InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226PFscan:PS51471PANTHER:PTHR10209
PANTHER:PTHR10209:SF178EnsemblPlantsGene:SORBI_3005G080400SUPFAM:SSF51197unigene:Sbi.7840UniParc:UPI0001A86579RefSeq:XP_002449221.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr5:+:10607037..10608651
Molecular Weight (calculated)
39253.8 Da
IEP (calculated)
5.232
GRAVY (calculated)
-0.073
Length
366 amino acids
Sequence
(BLAST)
001: MDAKPQNLGG SLPVPNVQDL AARPADELTP PVLHRYIRDD ADVDADANGD AAASVPVVDL ARLLDPSHGE QEAAKLKAAC EDWGFFQVVN HGVPDAVIAD
101: VKADLQGFFG LPLPEKNAVA QEPGGIEGYG QAFVVAADQK LDWADMLFLF TQPPEYRASR FWPARPATFG DSLDRYSVEV QRVAAGLLAA MAANLGVAEA
201: DARKLTRLAG AQSVRINYYP PCPDGRVLGL SPHSDAVGLT LLLQVSAAVP GLQIRRRGAW VSVDPVPGAL VANVGDVVEV LTNGRYKSIE HRAVVSATHH
301: RVSIAAFHSA KFGGTYAPLE ETTMVHGEPA RYKTISVEDY VRLLLSCKLE GKNIMDAMKI NPPELQ
Best Arabidopsis Sequence Match ( AT1G17010.1 )
(BLAST)
001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.