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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • peroxisome 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, peroxisome
MultiLoc:peroxisome
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G407800.1 Wheat cytosol 90.86 91.6
TraesCS3D01G403000.1 Wheat cytosol 89.52 90.24
TraesCS3B01G440500.1 Wheat cytosol 88.17 88.89
TraesCS3A01G407900.1 Wheat cytosol 84.68 85.6
TraesCSU01G175100.1 Wheat cytosol 72.04 82.72
TraesCSU01G044600.1 Wheat mitochondrion 41.67 75.24
Os03t0856000-01 Rice cytosol 65.05 66.85
EES08209 Sorghum cytosol 64.25 65.3
KXG37090 Sorghum cytosol 63.17 64.92
Zm00001d012819_P001 Maize cytosol 63.17 64.56
KXG37089 Sorghum cytosol 61.56 63.79
VIT_02s0012g00320.t01 Wine grape cytosol 37.9 51.65
Bra010470.1-P Field mustard cytosol 34.95 48.69
VIT_02s0012g00390.t01 Wine grape cytosol 45.7 48.16
HORVU4Hr1G080610.2 Barley cytosol 46.24 47.38
VIT_02s0012g00440.t01 Wine grape extracellular 16.67 47.33
VIT_02s0012g00450.t01 Wine grape cytosol, nucleus, peroxisome 44.89 47.31
VIT_02s0012g00360.t01 Wine grape cytosol 41.67 46.13
VIT_02s0012g00400.t01 Wine grape cytosol, peroxisome, plastid 42.2 45.38
Bra026693.1-P Field mustard cytosol 43.55 45.25
HORVU2Hr1G010950.3 Barley cytoskeleton, cytosol, peroxisome 43.82 45.15
AT4G25300.1 Thale cress cytosol 43.01 44.94
HORVU1Hr1G056210.5 Barley cytosol 42.74 44.79
HORVU4Hr1G088340.42 Barley cytosol 44.62 44.62
VIT_02s0012g00350.t01 Wine grape cytosol 41.4 44.51
AT1G17020.1 Thale cress cytosol 42.74 44.41
AT4G25310.1 Thale cress cytosol 41.94 44.19
KRH75184 Soybean cytosol 29.57 44.18
HORVU2Hr1G010930.2 Barley cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 42.47 43.77
AT1G78550.1 Thale cress cytosol, nucleus, peroxisome 41.67 43.54
Bra019177.1-P Field mustard cytosol 41.4 43.5
Bra010472.1-P Field mustard cytosol 41.67 43.3
PGSC0003DMT400007989 Potato cytosol 42.2 43.25
Solyc02g071360.2.1 Tomato cytosol 42.2 43.25
Solyc02g071500.2.1 Tomato cytosol 41.13 43.22
KRH71023 Soybean cytosol 41.4 43.02
AT1G17010.1 Thale cress cytosol 41.67 42.94
KRH58590 Soybean cytosol 41.4 42.9
Bra010469.1-P Field mustard cytosol 40.05 42.57
Solyc02g071440.2.1 Tomato cytosol 40.05 42.57
KRH21858 Soybean cytosol 40.59 42.3
Solyc02g071470.2.1 Tomato cytosol 40.86 42.22
HORVU2Hr1G010960.1 Barley cytosol, mitochondrion, peroxisome 40.59 42.18
KRH13456 Soybean cytosol 39.78 41.93
KRH42495 Soybean cytosol 40.05 41.85
PGSC0003DMT400018673 Potato cytosol 31.45 41.79
KRH27437 Soybean cytosol 40.05 41.62
PGSC0003DMT400018663 Potato cytosol 40.32 41.55
Solyc02g071430.2.1 Tomato cytosol 40.59 41.48
KRH43438 Soybean nucleus 30.11 41.48
Bra026695.1-P Field mustard cytosol, nucleus, peroxisome 37.9 41.47
Solyc02g071450.2.1 Tomato cytosol 40.05 41.39
Bra035046.1-P Field mustard cytosol 39.78 41.34
KRH71025 Soybean cytosol 39.52 41.29
VIT_02s0012g00380.t01 Wine grape cytosol 29.57 41.2
Solyc02g071490.2.1 Tomato cytosol 39.78 41.0
Bra026008.1-P Field mustard cytosol, nucleus, peroxisome 37.9 40.87
Solyc02g071410.2.1 Tomato cytosol 39.52 40.83
PGSC0003DMT400007963 Potato cytosol 40.05 40.71
KRH27439 Soybean cytosol 38.98 40.39
VIT_02s0012g00410.t01 Wine grape plastid 37.37 40.17
Solyc02g071480.2.1 Tomato cytosol, nucleus, peroxisome 36.83 40.06
Solyc08g062370.2.1 Tomato cytoskeleton, cytosol, peroxisome 19.09 39.89
CDY69556 Canola cytosol 4.03 39.47
KRH71028 Soybean cytosol 38.44 39.29
KRH75001 Soybean cytosol 36.83 39.14
PGSC0003DMT400055956 Potato cytosol 18.55 38.76
PGSC0003DMT400007992 Potato cytosol, nucleus, peroxisome 37.63 38.67
PGSC0003DMT400007999 Potato cytosol 36.83 38.59
KRG89247 Soybean cytosol, peroxisome, plastid 24.46 38.56
PGSC0003DMT400018670 Potato cytosol 36.02 38.4
PGSC0003DMT400008001 Potato cytosol 36.56 37.99
Solyc02g071400.2.1 Tomato cytosol 34.68 37.94
Solyc02g071380.2.1 Tomato cytosol, nucleus, peroxisome 36.56 37.88
KRH21128 Soybean cytosol 27.69 37.45
KRH49750 Soybean cytosol 34.95 37.04
PGSC0003DMT400059406 Potato peroxisome 24.19 36.89
KRH11118 Soybean cytosol, nucleus, peroxisome, plastid 36.83 36.83
KRH58593 Soybean cytosol, peroxisome, plastid 35.48 36.36
KRG89246 Soybean cytosol 35.22 36.29
HORVU3Hr1G098580.2 Barley plastid 44.35 36.03
KRH49748 Soybean cytosol 35.22 35.79
HORVU7Hr1G028840.5 Barley cytosol 33.33 34.93
Bra013884.1-P Field mustard cytosol 40.86 34.62
HORVU7Hr1G009310.3 Barley cytosol 31.99 34.29
HORVU7Hr1G009320.1 Barley cytosol 24.73 33.95
HORVU6Hr1G088470.1 Barley cytosol 32.53 33.89
HORVU6Hr1G088540.1 Barley cytosol 32.53 33.89
PGSC0003DMT400007990 Potato nucleus 19.62 33.8
HORVU7Hr1G028870.3 Barley cytosol 32.26 33.61
HORVU1Hr1G066370.1 Barley cytosol, peroxisome 29.84 33.53
HORVU6Hr1G078640.9 Barley cytosol, peroxisome 30.38 33.53
HORVU7Hr1G010150.1 Barley cytosol, endoplasmic reticulum, peroxisome 31.99 33.43
HORVU7Hr1G028850.1 Barley cytosol 31.99 33.33
HORVU7Hr1G009140.4 Barley cytosol, peroxisome 31.99 33.15
HORVU7Hr1G009200.1 Barley cytosol, peroxisome 16.4 32.62
HORVU1Hr1G077370.1 Barley plastid 36.83 32.46
HORVU3Hr1G104290.2 Barley plastid 37.1 32.39
HORVU6Hr1G088440.1 Barley cytosol 30.65 32.02
HORVU7Hr1G021490.3 Barley cytosol, peroxisome 27.15 31.96
HORVU0Hr1G019590.1 Barley peroxisome 21.51 31.87
HORVU6Hr1G088420.2 Barley cytosol, peroxisome 30.38 31.65
HORVU5Hr1G075760.1 Barley cytosol 31.18 31.52
HORVU7Hr1G028880.10 Barley plastid 31.99 30.67
HORVU7Hr1G028710.2 Barley cytosol 30.11 29.95
HORVU5Hr1G124390.1 Barley cytosol 22.04 27.06
HORVU5Hr1G065620.7 Barley plastid 26.61 26.98
HORVU2Hr1G096500.1 Barley cytosol 13.17 23.9
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13UniProt:A0A287M9A4InterPro:DIOX_NGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114
EnsemblPlantsGene:HORVU3Hr1G091210EnsemblPlants:HORVU3Hr1G091210.2InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171PFAM:PF14226PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF178SUPFAM:SSF51197
UniParc:UPI000B465F82SEG:seg::::
Description
No Description!
Coordinates
chrchr3H:-:634860822..634862557
Molecular Weight (calculated)
40961.9 Da
IEP (calculated)
4.785
GRAVY (calculated)
-0.283
Length
372 amino acids
Sequence
(BLAST)
001: MMDDPKPRNL GGSLPVPNVQ DLAGRPDELA VTPTLLRRYV RAQPNTVDLR PDAPAGEEQE HVPVVDLRRL LGPDEDGLAG GRDEEAARLR SACEDWGFFQ
101: VVNHGIPEET LEEMKRSVMG FFALPLAEKA ALAQEPGEIE GYGQAFVVSE EQTLDWADMF FLLTQPPSYR DLRLWPSKPS TFRNCLEKYC TEVQRVAGEL
201: LGAMAENLGV KDHASMTRLA AAQAVRMNYY PPCPEAHVDS VLGLSPHSDA VGLTLLLQVS QVPGLQIRRK GGWVPVAPLP GALVVNVGDV VEVSTNGRYR
301: SVEHRAVVNA REERMSIATF HSGKFGTMYG PLEEVVGDEE PRYRSVSVEE YVKLVVSSKL DGKNIMDAMK IS
Best Arabidopsis Sequence Match ( AT1G17010.1 )
(BLAST)
001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.