Factsheet for TraesCSU01G044600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G013500.1	Wheat	mitochondrion	70.39	85.8
TraesCSU01G175100.1	Wheat	cytosol	94.66	60.19
VIT_02s0012g00440.t01	Wine grape	extracellular	27.67	43.51
TraesCS3B01G440500.1	Wheat	cytosol	77.18	43.09
TraesCS3A01G407800.1	Wheat	cytosol	77.18	43.09
TraesCS3A01G407900.1	Wheat	cytosol	76.21	42.66
HORVU3Hr1G091210.2	Barley	cytosol	75.24	41.67
Solyc08g062370.2.1	Tomato	cytoskeleton, cytosol, peroxisome	33.01	38.2
PGSC0003DMT400055956	Potato	cytosol	32.52	37.64
EES08209	Sorghum	cytosol	66.02	37.16
Os03t0856000-01	Rice	cytosol	62.14	35.36
KXG37089	Sorghum	cytosol	61.16	35.1
KXG37090	Sorghum	cytosol	61.16	34.81
Zm00001d012819_P001	Maize	cytosol	61.16	34.62
Bra010470.1-P	Field mustard	cytosol	42.72	32.96
KRH75184	Soybean	cytosol	37.38	30.92
KRG89247	Soybean	cytosol, peroxisome, plastid	34.95	30.51
PGSC0003DMT400059406	Potato	peroxisome	33.5	28.28
VIT_02s0012g00360.t01	Wine grape	cytosol	44.17	27.08
VIT_02s0012g00450.t01	Wine grape	cytosol, nucleus, peroxisome	45.15	26.35
VIT_02s0012g00390.t01	Wine grape	cytosol	44.17	25.78
Bra010469.1-P	Field mustard	cytosol	41.75	24.57
KRH43438	Soybean	nucleus	32.04	24.44
Bra026693.1-P	Field mustard	cytosol	42.23	24.3
Bra026695.1-P	Field mustard	cytosol, nucleus, peroxisome	39.81	24.12
AT1G17020.1	Thale cress	cytosol	41.75	24.02
VIT_02s0012g00320.t01	Wine grape	cytosol	31.55	23.81
AT4G25310.1	Thale cress	cytosol	40.78	23.8
Bra010472.1-P	Field mustard	cytosol	41.26	23.74
Bra019177.1-P	Field mustard	cytosol	40.78	23.73
VIT_02s0012g00400.t01	Wine grape	cytosol, peroxisome, plastid	39.81	23.7
AT4G25300.1	Thale cress	cytosol	40.78	23.6
Bra026008.1-P	Field mustard	cytosol, nucleus, peroxisome	39.32	23.48
AT1G17010.1	Thale cress	cytosol	40.78	23.27
Solyc02g071490.2.1	Tomato	cytosol	40.78	23.27
KRH21858	Soybean	cytosol	39.32	22.69
KRH13456	Soybean	cytosol	38.84	22.66
PGSC0003DMT400018663	Potato	cytosol	39.32	22.44
Solyc02g071440.2.1	Tomato	cytosol	37.86	22.29
Solyc02g071430.2.1	Tomato	cytosol	39.32	22.25
AT1G78550.1	Thale cress	cytosol, nucleus, peroxisome	38.35	22.19
PGSC0003DMT400007963	Potato	cytosol	39.32	22.13
VIT_02s0012g00350.t01	Wine grape	cytosol	36.89	21.97
KRG89246	Soybean	cytosol	38.35	21.88
KRH27437	Soybean	cytosol	37.86	21.79
Bra035046.1-P	Field mustard	cytosol	37.86	21.79
PGSC0003DMT400007989	Potato	cytosol	38.35	21.76
Solyc02g071360.2.1	Tomato	cytosol	38.35	21.76
Solyc02g071500.2.1	Tomato	cytosol	37.38	21.75
KRH75001	Soybean	cytosol	36.89	21.71
KRH58590	Soybean	cytosol	37.38	21.45
Solyc02g071470.2.1	Tomato	cytosol	37.38	21.39
KRH49750	Soybean	cytosol	36.41	21.37
KRH71023	Soybean	cytosol	36.89	21.23
KRH71028	Soybean	cytosol	37.38	21.15
PGSC0003DMT400007999	Potato	cytosol	36.41	21.13
KRH71025	Soybean	cytosol	36.41	21.07
KRH11118	Soybean	cytosol, nucleus, peroxisome, plastid	37.86	20.97
KRH27439	Soybean	cytosol	36.41	20.89
KRH42495	Soybean	cytosol	35.92	20.79
Solyc02g071380.2.1	Tomato	cytosol, nucleus, peroxisome	35.92	20.61
Solyc02g071450.2.1	Tomato	cytosol	35.92	20.56
Bra013884.1-P	Field mustard	cytosol	43.69	20.5
PGSC0003DMT400007992	Potato	cytosol, nucleus, peroxisome	35.92	20.44
PGSC0003DMT400008001	Potato	cytosol	35.44	20.39
Solyc02g071400.2.1	Tomato	cytosol	33.5	20.29
PGSC0003DMT400018670	Potato	cytosol	33.98	20.06
KRH49748	Soybean	cytosol	35.44	19.95
Solyc02g071480.2.1	Tomato	cytosol, nucleus, peroxisome	33.01	19.88
Solyc02g071410.2.1	Tomato	cytosol	34.47	19.72
KRH58593	Soybean	cytosol, peroxisome, plastid	34.47	19.56
VIT_02s0012g00410.t01	Wine grape	plastid	31.55	18.79
TraesCSU01G115000.1	Wheat	cytosol	30.58	18.21
PGSC0003DMT400018673	Potato	cytosol	23.79	17.5
KRH21128	Soybean	cytosol	23.3	17.45
TraesCSU01G102900.1	Wheat	cytosol	29.13	16.9
VIT_02s0012g00380.t01	Wine grape	cytosol	20.39	15.73
PGSC0003DMT400007990	Potato	nucleus	7.28	6.94
CDY69556	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCSU01G044600.1	EnsemblPlantsGene:TraesCSU01G044600	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF178	PFAM:PF03171	PFscan:PS51471	SEG:seg
SUPFAM:SSF51197	MapMan:50.1.13	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:35355927..35356714

Molecular Weight (calculated)

22711.4 Da

IEP (calculated)

8.806

GRAVY (calculated)

-0.187

Length

206 amino acids

Sequence
(BLAST)

001: MARRLSSRRS RHSTGFVNCL ANYSVEVQRV AGELLRAMAE NLGVRDHSDM TRLAASQAVR MNYYPPCPEA HVDRVLGLSP HSDAVALTLL LQVCPVPGLQ
101: INRNAGWVPV MPLPSALVVN VGDVVEVLTN GKYKSVEHRA VDNAREHRMS ITAFHSAKFG GTYGPLEEVV GDEEARYRTI NVNEYTKLML SGKLDGKNII
201: DAMKIN

Best Arabidopsis Sequence Match ( AT1G17020.1 )
(BLAST)

001: MEAKGAAQWS SILVPSVQEM VKEKTITTVP PRYVRSDQDK TEVDDDFDVK IEIPIIDMKR LCSSTTMDSE VEKLDFACKE WGFFQLVNHG IDSSFLDKVK
101: SEIQDFFNLP MEEKKKFWQR PDEIEGFGQA FVVSEDQKLD WADLFFHTVQ PVELRKPHLF PKLPLPFRDT LEMYSSEVQS VAKILIAKMA RALEIKPEEL
201: EKLFDDVDSV QSMRMNYYPP CPQPDQVIGL TPHSDSVGLT VLMQVNDVEG LQIKKDGKWV PVKPLPNAFI VNIGDVLEII TNGTYRSIEH RGVVNSEKER
301: LSIATFHNVG MYKEVGPAKS LVERQKVARF KRLTMKEYND GLFSRTLDGK AYLDALRI

Arabidopsis Description

SRG1Protein SRG1 [Source:UniProtKB/Swiss-Prot;Acc:Q39224]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.