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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, peroxisome
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc02g071440.2.1 Tomato cytosol 79.38 80.29
Solyc02g071470.2.1 Tomato cytosol 79.94 78.61
Solyc02g071450.2.1 Tomato cytosol 79.66 78.33
Solyc02g071410.2.1 Tomato cytosol 79.1 77.78
Solyc02g071480.2.1 Tomato cytosol, nucleus, peroxisome 71.47 73.98
Solyc02g071490.2.1 Tomato cytosol 66.67 65.37
VIT_10s0003g02420.t01 Wine grape cytosol 25.99 65.25
Solyc02g071380.2.1 Tomato cytosol, nucleus, peroxisome 53.95 53.2
Solyc02g071360.2.1 Tomato cytosol 53.11 51.79
Solyc02g071430.2.1 Tomato cytosol 53.11 51.65
VIT_10s0003g02430.t01 Wine grape cytosol, nucleus, peroxisome 68.93 49.59
Solyc02g071400.2.1 Tomato cytosol 45.2 47.06
GSMUA_AchrUn_... Banana cytosol, peroxisome 26.84 44.39
Solyc08g062370.2.1 Tomato cytoskeleton, cytosol, peroxisome 22.32 44.38
GSMUA_Achr11P... Banana plastid 42.94 44.19
GSMUA_AchrUn_... Banana cytosol, peroxisome 35.31 44.01
TraesCS4D01G363200.1 Wheat cytosol 42.37 43.1
TraesCS5A01G539800.1 Wheat cytosol 42.37 43.1
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 42.66 42.66
TraesCS3D01G013500.1 Wheat mitochondrion 20.34 42.6
TraesCS4B01G374200.1 Wheat cytosol 41.81 42.53
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 42.09 41.97
GSMUA_Achr11P... Banana cytosol 42.09 41.97
TraesCS3A01G407900.1 Wheat cytosol 43.22 41.58
TraesCS4B01G374300.1 Wheat cytosol 40.96 41.55
Os10t0558200-00 Rice cytosol 40.96 41.43
GSMUA_Achr11P... Banana cytosol 41.53 41.29
HORVU3Hr1G091210.2 Barley cytosol 43.22 41.13
Zm00001d040597_P001 Maize cytosol 41.24 41.01
TraesCS4D01G363100.1 Wheat cytosol 40.11 40.69
TraesCS3B01G440500.1 Wheat cytosol 42.37 40.65
TraesCS3D01G403000.1 Wheat cytosol 42.37 40.65
TraesCS4D01G363300.1 Wheat cytosol 38.98 40.47
Os01t0351800-01 Rice cytosol 39.27 40.41
GSMUA_Achr5P20940_001 Banana cytosol 40.96 40.39
TraesCS3A01G407800.1 Wheat cytosol 42.09 40.38
GSMUA_Achr11P... Banana cytosol 29.1 40.08
Os01t0352100-01 Rice cytosol 39.55 40.0
TraesCS4D01G363000.1 Wheat cytosol 40.4 39.94
TraesCS3D01G529900.1 Wheat cytosol 39.55 39.89
TraesCS5A01G539700.2 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole 38.7 39.83
HORVU4Hr1G088340.42 Barley cytosol 41.81 39.78
Zm00001d048547_P001 Maize cytosol, peroxisome, plastid 40.11 39.78
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 39.83 39.72
TraesCS5A01G539900.1 Wheat cytosol 35.59 39.62
EER91935 Sorghum cytosol 40.11 39.44
TraesCS1D01G222800.1 Wheat cytosol 39.27 39.27
Os10t0558900-01 Rice cytosol 30.79 39.21
EER95699 Sorghum cytosol 39.27 39.15
HORVU1Hr1G056210.5 Barley cytosol 39.27 39.15
Solyc01g067620.2.1 Tomato nucleus 40.11 39.12
TraesCS3A01G524700.1 Wheat cytosol 38.42 38.75
TraesCS2D01G064000.1 Wheat cytosol 29.66 38.75
Os10t0558750-01 Rice cytosol, nucleus, peroxisome 30.51 38.71
EES02838 Sorghum cytosol 38.42 38.53
TraesCS2B01G077800.1 Wheat cytosol 39.83 38.52
TraesCS2D01G063800.1 Wheat cytoskeleton, cytosol, peroxisome 39.83 38.52
HORVU2Hr1G010950.3 Barley cytoskeleton, cytosol, peroxisome 39.27 38.5
TraesCS1A01G221200.1 Wheat cytosol 38.42 38.42
Os10t0559500-01 Rice cytosol 38.98 38.33
TraesCS2D01G064100.1 Wheat cytosol 39.55 38.25
HORVU2Hr1G010930.2 Barley cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 38.98 38.23
Zm00001d041086_P001 Maize cytosol 38.42 38.1
TraesCS2A01G065800.1 Wheat cytosol 39.27 37.98
HORVU4Hr1G080610.2 Barley cytosol 38.7 37.74
EES15940 Sorghum cytosol 38.14 37.71
EES02842 Sorghum cytosol 40.96 37.66
KXG34760 Sorghum cytosol 38.14 37.6
Os10t0558700-02 Rice cytosol, nucleus, peroxisome 37.85 37.53
KXG32356 Sorghum plastid 36.72 37.46
TraesCSU01G044600.1 Wheat mitochondrion 21.75 37.38
Zm00001d029218_P001 Maize cytosol, peroxisome, plastid 32.49 37.34
TraesCS2D01G063400.1 Wheat cytosol 38.7 37.23
TraesCS1B01G234500.1 Wheat plastid 27.68 37.12
TraesCS2D01G063700.1 Wheat cytoskeleton, cytosol, peroxisome 38.14 37.09
Os03t0856000-01 Rice cytosol 37.85 37.02
TraesCS2B01G077500.1 Wheat cytoskeleton, cytosol, peroxisome 37.85 36.91
TraesCS2A01G065600.1 Wheat cytoskeleton, cytosol, peroxisome 38.14 36.89
OQU92563 Sorghum cytosol 38.7 36.83
KXG37090 Sorghum cytosol 37.57 36.74
TraesCSU01G175100.1 Wheat cytosol 33.62 36.73
TraesCS2A01G065400.1 Wheat cytosol 38.14 36.68
TraesCS2B01G077600.1 Wheat cytosol 38.14 36.68
TraesCS3B01G592000.1 Wheat cytosol 39.27 36.68
TraesCS4B01G335300.2 Wheat cytosol 37.57 36.64
TraesCS2A01G065500.1 Wheat cytosol 37.85 36.51
TraesCS2D01G063600.1 Wheat cytosol 37.85 36.51
EER91934 Sorghum cytosol 37.01 36.49
KXG37089 Sorghum cytosol 37.01 36.49
TraesCS2A01G065300.1 Wheat cytosol 37.57 36.14
TraesCS2D01G063500.1 Wheat cytosol 37.57 36.14
EES08209 Sorghum cytosol 37.29 36.07
Os10t0558400-00 Rice cytosol, peroxisome 40.4 36.02
HORVU2Hr1G010960.1 Barley cytosol, mitochondrion, peroxisome 36.16 35.75
Os09t0354100-00 Rice cytosol, peroxisome 28.81 35.54
Solyc10g086780.1.1 Tomato cytosol 31.07 35.48
Zm00001d012819_P001 Maize cytosol 36.44 35.44
TraesCS4D01G330600.1 Wheat cytosol 36.16 35.16
TraesCS4B01G374100.2 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 38.7 34.08
Solyc07g045040.2.1 Tomato cytosol 33.62 33.81
TraesCS3D01G471500.2 Wheat cytosol 32.77 32.95
TraesCS3A01G477000.2 Wheat cytosol 32.49 32.67
Solyc10g076840.1.1 Tomato cytosol 31.64 32.28
Solyc06g068270.2.1 Tomato nucleus 31.92 31.83
EES12050 Sorghum cytosol 31.64 31.64
OQU92296 Sorghum cytosol 31.92 31.48
Os03t0439500-01 Rice cytosol 33.05 31.45
TraesCS5D01G468100.1 Wheat cytosol 31.36 31.36
TraesCS5B01G466400.1 Wheat cytosol 31.07 31.07
TraesCS5A01G457300.1 Wheat cytosol 30.23 30.84
KXG19500 Sorghum cytosol, endoplasmic reticulum, peroxisome 38.7 30.72
TraesCS1B01G345200.1 Wheat cytosol 31.07 30.56
TraesCS1A01G331300.1 Wheat cytosol 30.23 30.31
KXG39676 Sorghum cytosol, endoplasmic reticulum, peroxisome 33.33 29.5
Zm00001d029636_P001 Maize extracellular 29.66 29.17
TraesCS3B01G520100.3 Wheat cytosol 31.92 29.12
TraesCS1A01G331400.1 Wheat cytosol, peroxisome, plastid 31.36 28.61
OQU92565 Sorghum mitochondrion, plastid 22.32 28.42
HORVU3Hr1G104290.2 Barley plastid 32.77 27.23
TraesCS1D01G333300.1 Wheat cytosol 24.58 26.52
Zm00001d041087_P001 Maize cytosol 35.59 26.36
Os09t0353700-00 Rice cytosol, peroxisome, plastid 29.94 26.11
HORVU1Hr1G077370.1 Barley plastid 30.23 25.36
GSMUA_AchrUn_... Banana mitochondrion 35.59 20.42
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13InterPro:DIOX_NGO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114InterPro:IPNS-like
InterPro:IPR005123InterPro:IPR027443UniProt:K4B8C6InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226
PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF130SUPFAM:SSF51197EnsemblPlantsGene:Solyc02g071500.2EnsemblPlants:Solyc02g071500.2.1
UniParc:UPI0002768E10:::::
Description
No Description!
Coordinates
chr2:-:40908709..40910849
Molecular Weight (calculated)
40510.9 Da
IEP (calculated)
5.489
GRAVY (calculated)
-0.313
Length
354 amino acids
Sequence
(BLAST)
001: MESTPVKMNF GKSLLVPSVQ ELSKQRLTNI PARYVRSEQE PPVINAGEAV PVIDLQKLIS GDSMDSELQK LHFACQQWGF LQVINHGVTP SLLEDFKREV
101: IEFFGLPMEE KKKLWQQEDN HEGFGQLFVV SEEQKLDWSD MFYITTLPSH IRQMDLFQKL HSKLREIMEA YCNEIKNLAM IILCQLAKAL RMDEKEMREL
201: FSDGVQSIRM NYYPPCPAPE KTIGFSPHSD ADALTVLFQL NETAGLQVRK DGVWVTVKPL PNALIVNIGD IMEIVSNGVY RSIEHRAIVN SNKERLSVAT
301: FYSSNLDSEL GPAQSLTGPN NPPIFRRVPV DKYFKDFFAR KLDGKSYIDF MKEE
Best Arabidopsis Sequence Match ( AT1G17020.1 )
(BLAST)
001: MEAKGAAQWS SILVPSVQEM VKEKTITTVP PRYVRSDQDK TEVDDDFDVK IEIPIIDMKR LCSSTTMDSE VEKLDFACKE WGFFQLVNHG IDSSFLDKVK
101: SEIQDFFNLP MEEKKKFWQR PDEIEGFGQA FVVSEDQKLD WADLFFHTVQ PVELRKPHLF PKLPLPFRDT LEMYSSEVQS VAKILIAKMA RALEIKPEEL
201: EKLFDDVDSV QSMRMNYYPP CPQPDQVIGL TPHSDSVGLT VLMQVNDVEG LQIKKDGKWV PVKPLPNAFI VNIGDVLEII TNGTYRSIEH RGVVNSEKER
301: LSIATFHNVG MYKEVGPAKS LVERQKVARF KRLTMKEYND GLFSRTLDGK AYLDALRI
Arabidopsis Description
SRG1Protein SRG1 [Source:UniProtKB/Swiss-Prot;Acc:Q39224]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.