Factsheet for Zm00001d040597_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02838	Sorghum	cytosol	86.52	87.25
KXG32356	Sorghum	plastid	78.65	80.69
Zm00001d029218_P001	Maize	cytosol, peroxisome, plastid	49.72	57.47
GSMUA_AchrUn_...	Banana	cytosol, peroxisome	42.7	53.52
GSMUA_Achr11P...	Banana	cytosol	52.81	52.96
GSMUA_Achr11P...	Banana	cytosol	38.2	52.92
GSMUA_Achr5P20940_001	Banana	cytosol	53.09	52.65
GSMUA_AchrUn_...	Banana	cytosol, peroxisome	31.46	52.34
GSMUA_Achr11P...	Banana	cytosol	52.25	52.25
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	51.4	51.69
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	50.84	50.99
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	50.84	50.99
Zm00001d012819_P001	Maize	cytosol	51.97	50.82
VIT_02s0012g00320.t01	Wine grape	cytosol	37.36	48.72
VIT_02s0012g00450.t01	Wine grape	cytosol, nucleus, peroxisome	47.47	47.88
Zm00001d048547_P001	Maize	cytosol, peroxisome, plastid	46.63	46.5
VIT_02s0012g00390.t01	Wine grape	cytosol	45.51	45.89
Bra010470.1-P	Field mustard	cytosol	33.99	45.32
VIT_02s0012g00360.t01	Wine grape	cytosol	42.7	45.24
VIT_02s0012g00400.t01	Wine grape	cytosol, peroxisome, plastid	43.82	45.09
VIT_02s0012g00440.t01	Wine grape	extracellular	16.57	45.04
KRH71023	Soybean	cytosol	44.1	43.85
PGSC0003DMT400007989	Potato	cytosol	44.66	43.8
Bra026693.1-P	Field mustard	cytosol	43.82	43.58
AT4G25310.1	Thale cress	cytosol	42.98	43.34
Bra019177.1-P	Field mustard	cytosol	42.98	43.22
Bra010472.1-P	Field mustard	cytosol	43.26	43.02
AT1G17020.1	Thale cress	cytosol	43.26	43.02
KRH27437	Soybean	cytosol	43.26	43.02
KRH75184	Soybean	cytosol	30.06	42.97
KRH75001	Soybean	cytosol	42.13	42.86
VIT_02s0012g00350.t01	Wine grape	cytosol	41.57	42.77
Solyc02g071360.2.1	Tomato	cytosol	43.54	42.7
KRH71025	Soybean	cytosol	42.42	42.42
Solyc02g071430.2.1	Tomato	cytosol	43.26	42.31
KRH43438	Soybean	nucleus	32.02	42.22
Zm00001d029636_P001	Maize	extracellular	42.7	42.22
KRH13456	Soybean	cytosol	41.85	42.21
KRH21858	Soybean	cytosol	42.13	42.02
AT1G17010.1	Thale cress	cytosol	42.13	41.55
KRH27439	Soybean	cytosol	41.85	41.5
Solyc02g071440.2.1	Tomato	cytosol	40.73	41.43
Bra035046.1-P	Field mustard	cytosol	41.57	41.34
AT4G25300.1	Thale cress	cytosol	41.29	41.29
AT1G78550.1	Thale cress	cytosol, nucleus, peroxisome	41.29	41.29
Solyc02g071500.2.1	Tomato	cytosol	41.01	41.24
KRH58590	Soybean	cytosol	41.57	41.23
KRH71028	Soybean	cytosol	42.13	41.21
VIT_02s0012g00410.t01	Wine grape	plastid	39.89	41.04
KRH42495	Soybean	cytosol	41.01	41.01
PGSC0003DMT400007963	Potato	cytosol	42.13	40.98
Zm00001d041086_P001	Maize	cytosol	41.01	40.9
Bra026695.1-P	Field mustard	cytosol, nucleus, peroxisome	39.04	40.88
Bra026008.1-P	Field mustard	cytosol, nucleus, peroxisome	39.04	40.29
Solyc02g071380.2.1	Tomato	cytosol, nucleus, peroxisome	40.45	40.11
Bra010469.1-P	Field mustard	cytosol	39.04	39.71
PGSC0003DMT400008001	Potato	cytosol	39.89	39.66
VIT_02s0012g00380.t01	Wine grape	cytosol	29.49	39.33
PGSC0003DMT400018673	Potato	cytosol	30.9	39.29
Solyc02g071410.2.1	Tomato	cytosol	39.33	38.89
PGSC0003DMT400007992	Potato	cytosol, nucleus, peroxisome	39.33	38.67
Solyc02g071470.2.1	Tomato	cytosol	39.04	38.61
Solyc02g071400.2.1	Tomato	cytosol	36.52	38.24
Solyc02g071450.2.1	Tomato	cytosol	38.2	37.78
PGSC0003DMT400018663	Potato	cytosol	38.2	37.67
Solyc02g071490.2.1	Tomato	cytosol	38.2	37.67
PGSC0003DMT400055956	Potato	cytosol	18.82	37.64
KRH21128	Soybean	cytosol	28.93	37.45
Solyc02g071480.2.1	Tomato	cytosol, nucleus, peroxisome	35.96	37.43
PGSC0003DMT400007999	Potato	cytosol	36.8	36.9
Solyc08g062370.2.1	Tomato	cytoskeleton, cytosol, peroxisome	18.26	36.52
KRH58593	Soybean	cytosol, peroxisome, plastid	37.08	36.36
Zm00001d042192_P001	Maize	extracellular	37.08	36.07
KRH49750	Soybean	cytosol	35.39	35.9
KRH11118	Soybean	cytosol, nucleus, peroxisome, plastid	37.36	35.75
KRG89246	Soybean	cytosol	36.24	35.73
PGSC0003DMT400007990	Potato	nucleus	21.63	35.65
PGSC0003DMT400018670	Potato	cytosol	34.83	35.53
KRG89247	Soybean	cytosol, peroxisome, plastid	23.31	35.17
KRH49748	Soybean	cytosol	35.39	34.43
PGSC0003DMT400059406	Potato	peroxisome	23.6	34.43
Zm00001d030548_P001	Maize	extracellular	32.87	33.14
Zm00001d045141_P001	Maize	cytosol	25.84	32.86
Zm00001d037487_P001	Maize	cytosol	32.3	31.86
Bra013884.1-P	Field mustard	cytosol	38.48	31.21
Zm00001d045145_P001	Maize	peroxisome	31.18	31.09
Zm00001d041087_P001	Maize	cytosol	37.64	28.03
GSMUA_AchrUn_...	Banana	mitochondrion	43.54	25.12

Protein Annotations

EntrezGene:100501344	Gene3D:2.60.120.330	MapMan:50.1.13	EMBL:BT085094	UniProt:C4J2P7	InterPro:DIOX_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	ProteinID:ONM31620.1
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF204
SUPFAM:SSF51197	UniParc:UPI000189D1C1	EnsemblPlantsGene:Zm00001d040597	EnsemblPlants:Zm00001d040597_P001	EnsemblPlants:Zm00001d040597_T001	:

Description

Protein SRG1

Coordinates

chr3:-:52325138..52326913

Molecular Weight (calculated)

39825.8 Da

IEP (calculated)

6.292

GRAVY (calculated)

-0.221

Length

356 amino acids

Sequence
(BLAST)

001: MAHAKAGASL PVPNVQALAQ TWHGSGEPVP FRYVRTEEIV AGEVVAGCAI PVVDLSRLLD PRSSEEELAN LGSACQHWGF FQLINHGVPD EVIQDTKKDM
101: VEFFKLPVEA KKVHAQVPGG IEGYGQAFVF SETQKLDWAD MIYLMISPKE SRDLRFWPTR PPSFRDSIER YSAETAKVTA CLLRFMAKDL GVEPERLLEE
201: FRGLPQSMRT TYYPPCRLAA DVLGLSPHTD ATGLTLLLHV NDVQGLQIRR DGKWLAVDPL DGALVVSIGD ILEILSNGRY RSIEHRAIVH PDKERISAAM
301: FHQTCPNTTV GPLQELVERD SGGARYRSMD YMDFMKGFFA AKLDGRRSHM DALRIY

Best Arabidopsis Sequence Match ( AT1G17020.1 )
(BLAST)

001: MEAKGAAQWS SILVPSVQEM VKEKTITTVP PRYVRSDQDK TEVDDDFDVK IEIPIIDMKR LCSSTTMDSE VEKLDFACKE WGFFQLVNHG IDSSFLDKVK
101: SEIQDFFNLP MEEKKKFWQR PDEIEGFGQA FVVSEDQKLD WADLFFHTVQ PVELRKPHLF PKLPLPFRDT LEMYSSEVQS VAKILIAKMA RALEIKPEEL
201: EKLFDDVDSV QSMRMNYYPP CPQPDQVIGL TPHSDSVGLT VLMQVNDVEG LQIKKDGKWV PVKPLPNAFI VNIGDVLEII TNGTYRSIEH RGVVNSEKER
301: LSIATFHNVG MYKEVGPAKS LVERQKVARF KRLTMKEYND GLFSRTLDGK AYLDALRI

Arabidopsis Description

SRG1Protein SRG1 [Source:UniProtKB/Swiss-Prot;Acc:Q39224]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.