Factsheet for Zm00001d042192_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04177	Sorghum	cytosol	87.98	87.03
TraesCS3D01G450500.1	Wheat	cytosol	78.69	78.05
TraesCS3B01G497900.1	Wheat	cytosol	78.69	77.63
TraesCS3A01G457700.1	Wheat	cytosol	77.6	76.76
Os01t0935400-00	Rice	cytosol	74.59	74.59
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	64.75	67.14
GSMUA_Achr11P...	Banana	cytosol	57.38	63.44
HORVU3Hr1G098580.2	Barley	plastid	78.69	62.88
VIT_05s0020g01310.t01	Wine grape	cytosol	60.93	61.1
Solyc01g067620.2.1	Tomato	nucleus	59.56	60.06
PGSC0003DMT400027666	Potato	cytosol, nucleus, peroxisome	59.29	59.78
KRH12130	Soybean	cytosol	59.02	59.18
KRH37129	Soybean	cytosol	59.02	59.18
CDY44337	Canola	cytosol	56.83	57.3
CDY38615	Canola	cytosol	56.83	57.3
Bra031281.1-P	Field mustard	cytosol	56.83	57.3
AT3G21420.1	Thale cress	cytosol	56.83	57.14
Bra023884.1-P	Field mustard	cytosol, nucleus, peroxisome	56.56	57.02
CDY19267	Canola	cytosol	56.56	57.02
CDY37294	Canola	cytosol, nucleus, peroxisome	56.28	56.75
KRH02234	Soybean	cytosol	52.46	53.33
Zm00001d012819_P001	Maize	cytosol	42.35	42.58
Zm00001d029218_P001	Maize	cytosol, peroxisome, plastid	35.25	41.88
Zm00001d045145_P001	Maize	peroxisome	38.25	39.22
Zm00001d041086_P001	Maize	cytosol	37.98	38.94
Zm00001d048547_P001	Maize	cytosol, peroxisome, plastid	36.61	37.53
Zm00001d030548_P001	Maize	extracellular	36.07	37.39
Zm00001d040597_P001	Maize	cytosol	36.07	37.08
Zm00001d045141_P001	Maize	cytosol	26.78	35.0
Zm00001d037487_P001	Maize	cytosol	33.33	33.8
Zm00001d029636_P001	Maize	extracellular	31.97	32.5
Zm00001d041087_P001	Maize	cytosol	36.34	27.82

Protein Annotations

MapMan:11.9.1.5	Gene3D:2.60.120.330	UniProt:A0A1D6N231	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	GO:GO:1901601	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	ProteinID:ONM34775.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF169	SUPFAM:SSF51197	UniParc:UPI0008441E3E	EnsemblPlantsGene:Zm00001d042192	EnsemblPlants:Zm00001d042192_P001
EnsemblPlants:Zm00001d042192_T001	SEG:seg	:	:	:	:

Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Coordinates

chr3:+:155540894..155542431

Molecular Weight (calculated)

40382.8 Da

IEP (calculated)

4.637

GRAVY (calculated)

-0.264

Length

366 amino acids

Sequence
(BLAST)

001: MAAAEIKIGQ VDDVQELHRT GLQTVPDRYI RDGDDRPDGD NVCAVAHIPV IDVAELQRDD VGLDKLRLAC EEWGFFQVVN HGIAHELLDE MERLAREFFM
101: LPLEEKEKYP MAPGGIQGYG HAFVFSEDQK LDWCNMLALG VEPASIRQPR LWPTAPAGFG ETLETYSAEV GELCRRLLAR IAETLGLAPA TFADMFGEAV
201: QAVRMNFYPP CPRPDLVMGL SAHSDGSAVT VLQQDAGCAG LQVRGKGGAW VPVHPVPHAL VVNIGDTLEV LTNGRYKSVE HRAVANGEQD RLSVVTFYAP
301: AYDVELGPLP EFVTDEAPCR YRRFNHGEYS RHYVTSRLEG KKTLEFAKID PLAGEHDGTA PEETST

Best Arabidopsis Sequence Match ( AT3G21420.1 )
(BLAST)

001: MAPLPISSIR VGKIDDVQEL IKSKPNKVPE RFIREEYERG VVVSSLKTHH LHHQIPVIDL SKLSKPDNDD FFFEILKLSQ ACEDWGFFQV INHGIEVEVV
101: EDIEEVASEF FDMPLEEKKK YPMEPGTVQG YGQAFIFSED QKLDWCNMFA LGVHPPQIRN PKLWPSKPAR FSESLEGYSK EIRELCKRLL KYIAISLGLK
201: EERFEEMFGE AVQAVRMNYY PPCSSPDLVL GLSPHSDGSA LTVLQQSKNS CVGLQILKDN TWVPVKPLPN ALVINIGDTI EVLSNGKYKS VEHRAVTNRE
301: KERLTIVTFY APNYEVEIEP MSELVDDETN PCKYRSYNHG DYSYHYVSNK LQGKKSLDFA KILN

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LIF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.