Factsheet for GSMUA_Achr11P05740_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

plastid 1
peroxisome 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	67.71	72.21
Solyc01g067620.2.1	Tomato	nucleus	69.12	67.22
PGSC0003DMT400027666	Potato	cytosol, nucleus, peroxisome	69.12	67.22
VIT_05s0020g01310.t01	Wine grape	cytosol	69.12	66.85
KRH37129	Soybean	cytosol	67.71	65.48
TraesCS3D01G450500.1	Wheat	cytosol	68.27	65.31
Zm00001d042192_P001	Maize	extracellular	67.14	64.75
TraesCS3B01G497900.1	Wheat	cytosol	67.99	64.69
KRH12130	Soybean	cytosol	66.86	64.66
TraesCS3A01G457700.1	Wheat	cytosol	67.71	64.59
Os01t0935400-00	Rice	cytosol	66.57	64.21
EES04177	Sorghum	cytosol	66.57	63.51
CDY44337	Canola	cytosol	64.59	62.81
AT3G21420.1	Thale cress	cytosol	64.59	62.64
Bra023884.1-P	Field mustard	cytosol, nucleus, peroxisome	64.31	62.53
Bra031281.1-P	Field mustard	cytosol	64.31	62.53
CDY38615	Canola	cytosol	64.31	62.53
CDY19267	Canola	cytosol	64.02	62.26
CDY37294	Canola	cytosol, nucleus, peroxisome	64.02	62.26
KRH02234	Soybean	cytosol	59.21	58.06
HORVU3Hr1G098580.2	Barley	plastid	67.71	52.18
GSMUA_AchrUn_...	Banana	cytosol, peroxisome	35.69	44.37
GSMUA_AchrUn_...	Banana	cytosol, peroxisome	26.06	42.99
GSMUA_Achr11P...	Banana	cytosol	42.78	42.42
GSMUA_Achr5P20940_001	Banana	cytosol	43.06	42.34
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	42.21	42.09
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	42.21	41.97
GSMUA_Achr11P...	Banana	cytosol	30.31	41.63
GSMUA_Achr11P...	Banana	cytosol	41.64	41.41
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	40.23	40.0
GSMUA_Achr11P...	Banana	plastid	37.96	38.95
GSMUA_AchrUn_...	Banana	mitochondrion	35.69	20.42

Protein Annotations

MapMan:11.9.1.5	Gene3D:2.60.120.330	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr11G05740_001
EnsemblPlants:GSMUA_Achr11P05740_001	EnsemblPlants:GSMUA_Achr11T05740_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0RPQ4
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF169
SUPFAM:SSF51197	UniParc:UPI0002954725	:	:	:	:

Description

Putative Protein SRG1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G05740_001]

Coordinates

chr11:-:4271904..4273226

Molecular Weight (calculated)

40190.3 Da

IEP (calculated)

6.716

GRAVY (calculated)

-0.304

Length

353 amino acids

Sequence
(BLAST)

001: MRIGEVEDIQ ELRRARPTAV PERYVRDTNE RPALSTILPS SLSVPVIDLS KLVCGTKRQS QEEMAKLTAA CEEWGFFQVI NHGIEKELLE TMERVAKEFF
101: MLPLEEKEKY PMAPGTIQGY GHAFVFSEDQ KLDWCNMLAL GVEPAFIRKP HLWPTNPANL SYTLEKYSKS IRRLCQILLM FISRSLGLSP NYFDEMFGVA
201: VQAVRMNYYP PCSRPDLVLG LSPHSDGSAL TVLQQDTASV GLQILKDNAW VPVHPIAEAL VINIGDTIEV LTNGRYRSVE HRAVTNKETD RLSVVTFYAP
301: SYDVELGPVP ELVNDQQPCR YRRFNHGEYS RHYVTNKLQG KKTLEFAKIQ TSY

Best Arabidopsis Sequence Match ( AT3G21420.1 )
(BLAST)

001: MAPLPISSIR VGKIDDVQEL IKSKPNKVPE RFIREEYERG VVVSSLKTHH LHHQIPVIDL SKLSKPDNDD FFFEILKLSQ ACEDWGFFQV INHGIEVEVV
101: EDIEEVASEF FDMPLEEKKK YPMEPGTVQG YGQAFIFSED QKLDWCNMFA LGVHPPQIRN PKLWPSKPAR FSESLEGYSK EIRELCKRLL KYIAISLGLK
201: EERFEEMFGE AVQAVRMNYY PPCSSPDLVL GLSPHSDGSA LTVLQQSKNS CVGLQILKDN TWVPVKPLPN ALVINIGDTI EVLSNGKYKS VEHRAVTNRE
301: KERLTIVTFY APNYEVEIEP MSELVDDETN PCKYRSYNHG DYSYHYVSNK LQGKKSLDFA KILN

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LIF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.