Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 4
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
25464976
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400027666 | Potato | cytosol, nucleus, peroxisome | 97.52 | 97.52 |
| VIT_05s0020g01310.t01 | Wine grape | cytosol | 76.31 | 75.89 |
| KRH37129 | Soybean | cytosol | 75.21 | 74.79 |
| KRH12130 | Soybean | cytosol | 74.66 | 74.25 |
| Bra031281.1-P | Field mustard | cytosol | 70.25 | 70.25 |
| CDY38615 | Canola | cytosol | 70.25 | 70.25 |
| CDY44337 | Canola | cytosol | 70.25 | 70.25 |
| AT3G21420.1 | Thale cress | cytosol | 69.97 | 69.78 |
| Bra023884.1-P | Field mustard | cytosol, nucleus, peroxisome | 69.7 | 69.7 |
| CDY19267 | Canola | cytosol | 69.7 | 69.7 |
| CDY37294 | Canola | cytosol, nucleus, peroxisome | 69.42 | 69.42 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, peroxisome | 67.22 | 69.12 |
| KRH02234 | Soybean | cytosol | 65.84 | 66.39 |
| GSMUA_Achr11P... | Banana | cytosol | 59.5 | 65.26 |
| TraesCS3D01G450500.1 | Wheat | cytosol | 61.71 | 60.7 |
| TraesCS3B01G497900.1 | Wheat | cytosol | 61.98 | 60.65 |
| TraesCS3A01G457700.1 | Wheat | cytosol | 61.43 | 60.27 |
| Zm00001d042192_P001 | Maize | extracellular | 60.06 | 59.56 |
| Os01t0935400-00 | Rice | cytosol | 59.5 | 59.02 |
| EES04177 | Sorghum | cytosol | 60.06 | 58.92 |
| HORVU3Hr1G098580.2 | Barley | plastid | 61.98 | 49.13 |
| Solyc08g062370.2.1 | Tomato | cytoskeleton, cytosol, peroxisome | 19.83 | 40.45 |
| Solyc02g071440.2.1 | Tomato | cytosol | 38.84 | 40.29 |
| Solyc02g071500.2.1 | Tomato | cytosol | 39.12 | 40.11 |
| Solyc02g071360.2.1 | Tomato | cytosol | 39.67 | 39.67 |
| Solyc02g071490.2.1 | Tomato | cytosol | 39.39 | 39.61 |
| Solyc10g086780.1.1 | Tomato | cytosol | 33.33 | 39.03 |
| Solyc02g071380.2.1 | Tomato | cytosol, nucleus, peroxisome | 38.29 | 38.72 |
| Solyc02g071450.2.1 | Tomato | cytosol | 38.02 | 38.33 |
| Solyc02g071470.2.1 | Tomato | cytosol | 37.74 | 38.06 |
| Solyc10g076840.1.1 | Tomato | cytosol | 35.54 | 37.18 |
| Solyc02g071410.2.1 | Tomato | cytosol | 36.64 | 36.94 |
| Solyc02g071480.2.1 | Tomato | cytosol, nucleus, peroxisome | 34.44 | 36.55 |
| Solyc02g071430.2.1 | Tomato | cytosol | 36.64 | 36.54 |
| Solyc06g068270.2.1 | Tomato | nucleus | 33.61 | 34.37 |
| Solyc07g045040.2.1 | Tomato | cytosol | 33.06 | 34.09 |
| Solyc02g071400.2.1 | Tomato | cytosol | 31.68 | 33.82 |
Protein Annotations
| MapMan:11.9.1.5 | Gene3D:2.60.120.330 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPNS-like |
| InterPro:IPR005123 | InterPro:IPR027443 | UniProt:K4AX10 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF169 | SUPFAM:SSF51197 | EnsemblPlantsGene:Solyc01g067620.2 | EnsemblPlants:Solyc01g067620.2.1 |
| UniParc:UPI0002763162 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:+:76454195..76456121
Molecular Weight (calculated)
41400.1 Da
IEP (calculated)
6.249
GRAVY (calculated)
-0.271
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPVPSFPVK VGHIDDVQEL KKIKPSSIPE RFVRDMIERP KLATVTTPSS CSLNIPVVDL SRISNSQDFH NEIMKLSTSC EEWGFFQVIN HGIDLDLLEK
101: MEKIAMEFFM LPLEEKQKYP MAPGTVQGYG QAFVFSEDQK LDWCNMFALG VEPHFIRNPK LWPTKPLDFS ETVDIYSREI RKLCKKLLKY IAMSLGLNDD
201: IFEEMFGVAV QAVRMNYYPA CPRPDLVLGL SPHSDGSALT VLQQGKCSSS VGLQILKDNV WVPVQPIPNA LVINIGDTIE VLTNGRYKSV EHRAVTHQEK
301: DRLSIVTFYA PSYEIELGPL EELVDENNPC KYKRYNHGEY SMHYVTNKLQ GKKTLEFAKI YDK
101: MEKIAMEFFM LPLEEKQKYP MAPGTVQGYG QAFVFSEDQK LDWCNMFALG VEPHFIRNPK LWPTKPLDFS ETVDIYSREI RKLCKKLLKY IAMSLGLNDD
201: IFEEMFGVAV QAVRMNYYPA CPRPDLVLGL SPHSDGSALT VLQQGKCSSS VGLQILKDNV WVPVQPIPNA LVINIGDTIE VLTNGRYKSV EHRAVTHQEK
301: DRLSIVTFYA PSYEIELGPL EELVDENNPC KYKRYNHGEY SMHYVTNKLQ GKKTLEFAKI YDK
001: MAPLPISSIR VGKIDDVQEL IKSKPNKVPE RFIREEYERG VVVSSLKTHH LHHQIPVIDL SKLSKPDNDD FFFEILKLSQ ACEDWGFFQV INHGIEVEVV
101: EDIEEVASEF FDMPLEEKKK YPMEPGTVQG YGQAFIFSED QKLDWCNMFA LGVHPPQIRN PKLWPSKPAR FSESLEGYSK EIRELCKRLL KYIAISLGLK
201: EERFEEMFGE AVQAVRMNYY PPCSSPDLVL GLSPHSDGSA LTVLQQSKNS CVGLQILKDN TWVPVKPLPN ALVINIGDTI EVLSNGKYKS VEHRAVTNRE
301: KERLTIVTFY APNYEVEIEP MSELVDDETN PCKYRSYNHG DYSYHYVSNK LQGKKSLDFA KILN
101: EDIEEVASEF FDMPLEEKKK YPMEPGTVQG YGQAFIFSED QKLDWCNMFA LGVHPPQIRN PKLWPSKPAR FSESLEGYSK EIRELCKRLL KYIAISLGLK
201: EERFEEMFGE AVQAVRMNYY PPCSSPDLVL GLSPHSDGSA LTVLQQSKNS CVGLQILKDN TWVPVKPLPN ALVINIGDTI EVLSNGKYKS VEHRAVTNRE
301: KERLTIVTFY APNYEVEIEP MSELVDDETN PCKYRSYNHG DYSYHYVSNK LQGKKSLDFA KILN
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LIF4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.