Factsheet for PGSC0003DMT400027666

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g067620.2.1	Tomato	nucleus	97.52	97.52
VIT_05s0020g01310.t01	Wine grape	cytosol	76.86	76.44
KRH37129	Soybean	cytosol	75.48	75.07
KRH12130	Soybean	cytosol	74.93	74.52
Bra031281.1-P	Field mustard	cytosol	70.25	70.25
CDY38615	Canola	cytosol	70.25	70.25
CDY44337	Canola	cytosol	70.25	70.25
AT3G21420.1	Thale cress	cytosol	69.97	69.78
Bra023884.1-P	Field mustard	cytosol, nucleus, peroxisome	69.42	69.42
CDY37294	Canola	cytosol, nucleus, peroxisome	69.15	69.15
CDY19267	Canola	cytosol	69.15	69.15
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	67.22	69.12
KRH02234	Soybean	cytosol	66.39	66.94
GSMUA_Achr11P...	Banana	cytosol	59.5	65.26
TraesCS3D01G450500.1	Wheat	cytosol	61.98	60.98
TraesCS3B01G497900.1	Wheat	cytosol	62.26	60.92
TraesCS3A01G457700.1	Wheat	cytosol	61.71	60.54
Zm00001d042192_P001	Maize	extracellular	59.78	59.29
EES04177	Sorghum	cytosol	60.06	58.92
Os01t0935400-00	Rice	cytosol	58.95	58.47
HORVU3Hr1G098580.2	Barley	plastid	62.26	49.34
PGSC0003DMT400007989	Potato	cytosol	40.22	40.22
PGSC0003DMT400018663	Potato	cytosol	39.12	39.34
PGSC0003DMT400055956	Potato	cytosol	19.28	39.33
PGSC0003DMT400008001	Potato	cytosol	38.57	39.11
PGSC0003DMT400007992	Potato	cytosol, nucleus, peroxisome	38.57	38.67
PGSC0003DMT400018673	Potato	cytosol	29.75	38.57
PGSC0003DMT400007999	Potato	cytosol	37.47	38.31
PGSC0003DMT400049384	Potato	cytosol	29.48	38.08
PGSC0003DMT400049392	Potato	cytosol	36.09	37.75
PGSC0003DMT400059406	Potato	peroxisome	25.34	37.7
PGSC0003DMT400018670	Potato	cytosol	35.81	37.25
PGSC0003DMT400007963	Potato	cytosol	37.19	36.89
PGSC0003DMT400073345	Potato	cytosol	34.44	35.21
PGSC0003DMT400007990	Potato	nucleus	20.66	34.72
PGSC0003DMT400044918	Potato	cytosol	19.83	31.3

Protein Annotations

EntrezGene:102591514	MapMan:11.9.1.5	Gene3D:2.60.120.330	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M1AQ10	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	EnsemblPlantsGene:PGSC0003DMG400010666	PGSC:PGSC0003DMG400010666	EnsemblPlants:PGSC0003DMT400027666	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF169	SUPFAM:SSF51197	UniParc:UPI0002958D3C	RefSeq:XP_006342742.1	:	:

Description

Flavonol synthase/flavanone 3-hydroxylase [Source:PGSC_GENE;Acc:PGSC0003DMG400010666]

Coordinates

chr1:+:59270758..59272699

Molecular Weight (calculated)

41299.9 Da

IEP (calculated)

5.855

GRAVY (calculated)

-0.250

Length

363 amino acids

Sequence
(BLAST)

001: MAPVPSFPVK VGHIDDVQEL KKIKPSSIPE RFVRDMIERP KLATATTPSS CNLNIPVVDL SKISNSQDFH NEIMKLSTSC EEWGFFQVIN HGIDLDLLEK
101: MEKISMEFFM LPLEEKQKYP MAPGTVQGYG QAFVFSEDQK LDWCNMFALG VEPHFIRNPK LWPTKPLDFS ETVDIYSREI RKLCKNLLKY IAMSLGLNED
201: IFEEMFGVAV QAVRMNYYPA CPRPDLVLGL SPHSDGSALT VLQQGICSSS VGLQILKDNV WVPVQPIPNA LVINIGDTIE VLTNGRYKSV EHRAVTHQEK
301: DRLSIVTFYA PSYEIELGPL AELVDENNPC KYKRYNHGEY SMHYVTNKLQ GKKTLEFAKI YDN

Best Arabidopsis Sequence Match ( AT3G21420.1 )
(BLAST)

001: MAPLPISSIR VGKIDDVQEL IKSKPNKVPE RFIREEYERG VVVSSLKTHH LHHQIPVIDL SKLSKPDNDD FFFEILKLSQ ACEDWGFFQV INHGIEVEVV
101: EDIEEVASEF FDMPLEEKKK YPMEPGTVQG YGQAFIFSED QKLDWCNMFA LGVHPPQIRN PKLWPSKPAR FSESLEGYSK EIRELCKRLL KYIAISLGLK
201: EERFEEMFGE AVQAVRMNYY PPCSSPDLVL GLSPHSDGSA LTVLQQSKNS CVGLQILKDN TWVPVKPLPN ALVINIGDTI EVLSNGKYKS VEHRAVTNRE
301: KERLTIVTFY APNYEVEIEP MSELVDDETN PCKYRSYNHG DYSYHYVSNK LQGKKSLDFA KILN

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LIF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.