Factsheet for PGSC0003DMT400007999

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400008001	Potato	cytosol	86.48	85.75
PGSC0003DMT400007992	Potato	cytosol, nucleus, peroxisome	78.59	77.07
PGSC0003DMT400007990	Potato	nucleus	45.63	75.0
PGSC0003DMT400055956	Potato	cytosol	28.73	57.3
PGSC0003DMT400018663	Potato	cytosol	56.62	55.68
PGSC0003DMT400007963	Potato	cytosol	56.06	54.37
PGSC0003DMT400018670	Potato	cytosol	50.42	51.29
PGSC0003DMT400007989	Potato	cytosol	52.39	51.24
PGSC0003DMT400018673	Potato	cytosol	40.0	50.71
GSMUA_AchrUn_...	Banana	cytosol, peroxisome	36.9	46.13
PGSC0003DMT400059406	Potato	peroxisome	30.7	44.67
GSMUA_AchrUn_...	Banana	cytosol, peroxisome	26.76	44.39
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	43.1	43.22
GSMUA_Achr11P...	Banana	cytosol	31.27	43.19
GSMUA_Achr11P...	Banana	cytosol	43.1	43.1
TraesCS4B01G374300.1	Wheat	cytosol	42.25	42.98
GSMUA_Achr11P...	Banana	cytosol	43.1	42.98
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	42.82	42.82
GSMUA_Achr11P...	Banana	plastid	41.41	42.73
Os01t0351800-01	Rice	cytosol	41.41	42.73
TraesCS4D01G363300.1	Wheat	cytosol	40.56	42.23
TraesCS4D01G363100.1	Wheat	cytosol	41.41	42.12
GSMUA_Achr5P20940_001	Banana	cytosol	42.54	42.06
TraesCS5A01G539900.1	Wheat	cytosol	37.46	41.82
EER95699	Sorghum	cytosol	41.69	41.69
TraesCS5A01G539800.1	Wheat	cytosol	40.85	41.67
TraesCS5A01G539700.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	40.28	41.57
TraesCS3D01G013500.1	Wheat	mitochondrion	19.72	41.42
TraesCS4D01G363200.1	Wheat	cytosol	40.56	41.38
Os10t0558900-01	Rice	cytosol	32.39	41.37
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	41.13	41.13
TraesCS4B01G374200.1	Wheat	cytosol	40.28	41.09
TraesCS3D01G529900.1	Wheat	cytosol	40.56	41.03
Zm00001d048547_P001	Maize	cytosol, peroxisome, plastid	41.13	40.9
Os10t0558200-00	Rice	cytosol	40.28	40.86
Os09t0354100-00	Rice	cytosol, peroxisome	32.96	40.77
Os10t0559500-01	Rice	cytosol	41.13	40.56
TraesCS3A01G524700.1	Wheat	cytosol	40.0	40.46
HORVU2Hr1G010950.3	Barley	cytoskeleton, cytosol, peroxisome	40.85	40.17
Os10t0558750-01	Rice	cytosol, nucleus, peroxisome	31.55	40.14
TraesCS2D01G064000.1	Wheat	cytosol	30.14	39.48
TraesCS2B01G077500.1	Wheat	cytoskeleton, cytosol, peroxisome	40.28	39.39
TraesCS2D01G063700.1	Wheat	cytoskeleton, cytosol, peroxisome	40.28	39.29
KXG34760	Sorghum	cytosol	39.72	39.28
EER91935	Sorghum	cytosol	39.72	39.17
Os01t0352100-01	Rice	cytosol	38.59	39.14
TraesCS2B01G077600.1	Wheat	cytosol	40.56	39.13
TraesCS2A01G065600.1	Wheat	cytoskeleton, cytosol, peroxisome	40.28	39.07
TraesCS2D01G063400.1	Wheat	cytosol	40.28	38.86
TraesCS2D01G063500.1	Wheat	cytosol	40.28	38.86
TraesCS2D01G063800.1	Wheat	cytoskeleton, cytosol, peroxisome	40.0	38.8
TraesCS3B01G440500.1	Wheat	cytosol	40.28	38.75
HORVU4Hr1G088340.42	Barley	cytosol	40.56	38.71
Zm00001d029218_P001	Maize	cytosol, peroxisome, plastid	33.52	38.64
EES15940	Sorghum	cytosol	38.87	38.55
TraesCS4D01G363000.1	Wheat	cytosol	38.87	38.55
HORVU2Hr1G010930.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	39.15	38.5
TraesCS3D01G403000.1	Wheat	cytosol	40.0	38.48
TraesCS3B01G592000.1	Wheat	cytosol	40.85	38.26
TraesCS3A01G407800.1	Wheat	cytosol	39.72	38.21
TraesCS2A01G065500.1	Wheat	cytosol	39.44	38.15
Zm00001d041086_P001	Maize	cytosol	38.31	38.1
HORVU1Hr1G056210.5	Barley	cytosol	38.03	38.03
TraesCS2D01G063600.1	Wheat	cytosol	39.15	37.87
TraesCS1D01G222800.1	Wheat	cytosol	37.75	37.85
TraesCS3A01G477000.2	Wheat	cytosol	37.46	37.78
TraesCS2A01G065300.1	Wheat	cytosol	39.15	37.77
TraesCS2A01G065400.1	Wheat	cytosol	39.15	37.77
EER91934	Sorghum	cytosol	38.03	37.6
KXG37089	Sorghum	cytosol	38.03	37.6
TraesCS3A01G407900.1	Wheat	cytosol	38.87	37.5
PGSC0003DMT400027666	Potato	cytosol, nucleus, peroxisome	38.31	37.47
TraesCS2A01G065800.1	Wheat	cytosol	38.59	37.43
TraesCS2B01G077800.1	Wheat	cytosol	38.59	37.43
TraesCS2D01G064100.1	Wheat	cytosol	38.59	37.43
TraesCS1A01G221200.1	Wheat	cytosol	37.18	37.29
Os10t0558700-02	Rice	cytosol, nucleus, peroxisome	37.46	37.25
TraesCS3D01G471500.2	Wheat	cytosol	36.62	36.93
HORVU2Hr1G010960.1	Barley	cytosol, mitochondrion, peroxisome	37.18	36.87
HORVU3Hr1G091210.2	Barley	cytosol	38.59	36.83
Zm00001d040597_P001	Maize	cytosol	36.9	36.8
HORVU4Hr1G080610.2	Barley	cytosol	37.46	36.64
TraesCS4B01G335300.2	Wheat	cytosol	37.46	36.64
KXG32356	Sorghum	plastid	35.77	36.6
PGSC0003DMT400049392	Potato	cytosol	35.77	36.6
EES02838	Sorghum	cytosol	36.34	36.54
TraesCS1A01G331300.1	Wheat	cytosol	36.34	36.54
Zm00001d012819_P001	Maize	cytosol	37.46	36.54
OQU92296	Sorghum	cytosol	36.9	36.49
KXG37090	Sorghum	cytosol	37.18	36.46
TraesCSU01G044600.1	Wheat	mitochondrion	21.13	36.41
EES08209	Sorghum	cytosol	37.46	36.34
PGSC0003DMT400049384	Potato	cytosol	28.73	36.3
OQU92563	Sorghum	cytosol	38.03	36.29
TraesCS4B01G374100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.85	36.07
TraesCS1B01G234500.1	Wheat	plastid	26.76	35.98
Os03t0856000-01	Rice	cytosol	36.62	35.91
TraesCSU01G175100.1	Wheat	cytosol	32.39	35.49
Os03t0439500-01	Rice	cytosol	36.9	35.22
Zm00001d029636_P001	Maize	extracellular	35.21	34.72
EES12050	Sorghum	cytosol	34.37	34.46
TraesCS4D01G330600.1	Wheat	cytosol	35.21	34.34
Os10t0558400-00	Rice	cytosol, peroxisome	37.75	33.75
TraesCS5D01G468100.1	Wheat	cytosol	33.52	33.62
TraesCS1B01G345200.1	Wheat	cytosol	33.8	33.33
TraesCS3B01G520100.3	Wheat	cytosol	36.34	33.25
EES02842	Sorghum	cytosol	36.06	33.25
PGSC0003DMT400073345	Potato	cytosol	33.24	33.24
TraesCS5A01G457300.1	Wheat	cytosol	32.39	33.14
TraesCS1A01G331400.1	Wheat	cytosol, peroxisome, plastid	36.06	32.99
TraesCS5B01G466400.1	Wheat	cytosol	32.39	32.49
KXG19500	Sorghum	cytosol, endoplasmic reticulum, peroxisome	40.0	31.84
KXG39676	Sorghum	cytosol, endoplasmic reticulum, peroxisome	35.77	31.75
HORVU3Hr1G104290.2	Barley	plastid	36.62	30.52
OQU92565	Sorghum	mitochondrion, plastid	23.66	30.22
TraesCS1D01G333300.1	Wheat	cytosol	27.89	30.18
Os09t0353700-00	Rice	cytosol, peroxisome, plastid	33.52	29.31
HORVU1Hr1G077370.1	Barley	plastid	34.65	29.15
Zm00001d041087_P001	Maize	cytosol	35.49	26.36
PGSC0003DMT400044918	Potato	cytosol	16.06	24.78
GSMUA_AchrUn_...	Banana	mitochondrion	35.77	20.58

Protein Annotations

EntrezGene:102602863	Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0ZTW5	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	EnsemblPlantsGene:PGSC0003DMG400003094	PGSC:PGSC0003DMG400003094	EnsemblPlants:PGSC0003DMT400007999	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF168	SUPFAM:SSF51197	UniParc:UPI0002962437	RefSeq:XP_006355630.1	:	:

Description

Leucoanthocyanidin dioxygenase [Source:PGSC_GENE;Acc:PGSC0003DMG400003094]

Coordinates

chr2:-:30619425..30622178

Molecular Weight (calculated)

40465.0 Da

IEP (calculated)

5.760

GRAVY (calculated)

-0.355

Length

355 amino acids

Sequence
(BLAST)

001: MAMETHTGDQ LQVNYKKVPS VQEMAKTKLV TIPSRYIRDN QDPSIASSNY KEVPVIDMQR LINDSMNLEL NKLHIAAKEW GFFQLINHGV NFSMMEKMKD
101: EIKKLFNLPL EEKKKFEQSS GELDGFGQLF VVSDEQKLDW ADLFVLKTAP TYLRRPIFSK LPLSLRETIE EYSKEVNELS MKVLEMLGKA LGIDEEEVKS
201: VFEEGMQSMK MNYYPPCPQP EKVMGLCPHS DSSGLTILLQ VNEIEGLQIK KDGIWIPILP LPNAFVVNVG DALEIFSNGI YKSIEHRSVV NSERERMSVA
301: TFQNPRLDGE LGPANSLINA HNPPKFKKIG VAEFYKGYLT REFVGKSYVD TMKIN

Best Arabidopsis Sequence Match ( AT1G17020.1 )
(BLAST)

001: MEAKGAAQWS SILVPSVQEM VKEKTITTVP PRYVRSDQDK TEVDDDFDVK IEIPIIDMKR LCSSTTMDSE VEKLDFACKE WGFFQLVNHG IDSSFLDKVK
101: SEIQDFFNLP MEEKKKFWQR PDEIEGFGQA FVVSEDQKLD WADLFFHTVQ PVELRKPHLF PKLPLPFRDT LEMYSSEVQS VAKILIAKMA RALEIKPEEL
201: EKLFDDVDSV QSMRMNYYPP CPQPDQVIGL TPHSDSVGLT VLMQVNDVEG LQIKKDGKWV PVKPLPNAFI VNIGDVLEII TNGTYRSIEH RGVVNSEKER
301: LSIATFHNVG MYKEVGPAKS LVERQKVARF KRLTMKEYND GLFSRTLDGK AYLDALRI

Arabidopsis Description

SRG1Protein SRG1 [Source:UniProtKB/Swiss-Prot;Acc:Q39224]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.