Factsheet for TraesCS4B01G374100.2

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

peroxisome 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G539900.1	Wheat	cytosol	72.64	91.82
TraesCS4D01G363300.1	Wheat	cytosol	77.61	91.5
TraesCS4B01G374300.1	Wheat	cytosol	70.9	81.66
TraesCS4B01G374200.1	Wheat	cytosol	70.65	81.61
HORVU4Hr1G088340.42	Barley	cytosol	74.63	80.65
TraesCS3B01G592000.1	Wheat	cytosol	72.89	77.31
Os01t0351800-01	Rice	cytosol	58.21	68.02
Os01t0352100-01	Rice	cytosol	55.72	64.0
Zm00001d048547_P001	Maize	cytosol, peroxisome, plastid	55.72	62.75
EER95699	Sorghum	cytosol	54.98	62.25
GSMUA_Achr11P...	Banana	plastid	48.26	56.4
VIT_02s0012g00320.t01	Wine grape	cytosol	34.58	50.92
VIT_02s0012g00440.t01	Wine grape	extracellular	16.42	50.38
VIT_02s0012g00390.t01	Wine grape	cytosol	44.03	50.14
VIT_02s0012g00450.t01	Wine grape	cytosol, nucleus, peroxisome	43.03	49.01
VIT_02s0012g00400.t01	Wine grape	cytosol, peroxisome, plastid	42.04	48.84
VIT_02s0012g00360.t01	Wine grape	cytosol	40.3	48.21
Bra010470.1-P	Field mustard	cytosol	29.6	44.57
TraesCS2B01G077500.1	Wheat	cytoskeleton, cytosol, peroxisome	40.05	44.35
VIT_02s0012g00350.t01	Wine grape	cytosol	38.06	44.22
Bra026693.1-P	Field mustard	cytosol	39.3	44.13
KRH42495	Soybean	cytosol	39.05	44.1
KRH13456	Soybean	cytosol	38.56	43.91
TraesCS3B01G440500.1	Wheat	cytosol	40.3	43.9
Bra019177.1-P	Field mustard	cytosol	38.31	43.5
TraesCS1B01G234500.1	Wheat	plastid	28.36	43.18
AT4G25310.1	Thale cress	cytosol	37.81	43.06
AT1G17020.1	Thale cress	cytosol	38.31	43.02
Bra035046.1-P	Field mustard	cytosol	38.31	43.02
TraesCS2B01G077600.1	Wheat	cytosol	39.3	42.93
TraesCS2B01G077800.1	Wheat	cytosol	39.05	42.9
VIT_02s0012g00410.t01	Wine grape	plastid	36.82	42.77
Bra026695.1-P	Field mustard	cytosol, nucleus, peroxisome	36.07	42.65
TraesCS4B01G335300.2	Wheat	cytosol	38.31	42.42
AT1G17010.1	Thale cress	cytosol	38.06	42.38
Solyc02g071380.2.1	Tomato	cytosol, nucleus, peroxisome	37.81	42.34
KRH27437	Soybean	cytosol	37.56	42.18
PGSC0003DMT400008001	Potato	cytosol	37.56	42.18
KRH71023	Soybean	cytosol	37.31	41.9
AT1G78550.1	Thale cress	cytosol, nucleus, peroxisome	37.06	41.85
AT4G25300.1	Thale cress	cytosol	36.82	41.57
Bra026008.1-P	Field mustard	cytosol, nucleus, peroxisome	35.57	41.45
PGSC0003DMT400007992	Potato	cytosol, nucleus, peroxisome	37.31	41.44
KRH58590	Soybean	cytosol	36.82	41.23
Solyc02g071430.2.1	Tomato	cytosol	37.31	41.21
Solyc02g071490.2.1	Tomato	cytosol	36.82	41.0
KRH21858	Soybean	cytosol	36.32	40.9
PGSC0003DMT400007999	Potato	cytosol	36.07	40.85
VIT_02s0012g00380.t01	Wine grape	cytosol	27.11	40.82
KRH75001	Soybean	cytosol	35.32	40.57
KRH27439	Soybean	cytosol	36.07	40.39
Solyc02g071360.2.1	Tomato	cytosol	36.32	40.22
PGSC0003DMT400018663	Potato	cytosol	36.07	40.17
PGSC0003DMT400007989	Potato	cytosol	36.07	39.94
PGSC0003DMT400007963	Potato	cytosol	36.32	39.89
KRH71025	Soybean	cytosol	35.32	39.89
KRH75184	Soybean	cytosol	24.63	39.76
Bra010469.1-P	Field mustard	cytosol	34.58	39.71
Solyc02g071400.2.1	Tomato	cytosol	33.58	39.71
PGSC0003DMT400018673	Potato	cytosol	27.61	39.64
Bra010472.1-P	Field mustard	cytosol	34.83	39.11
KRH71028	Soybean	cytosol	35.32	39.01
PGSC0003DMT400018670	Potato	cytosol	33.83	38.97
KRH43438	Soybean	nucleus	26.12	38.89
Solyc02g071410.2.1	Tomato	cytosol	34.83	38.89
Solyc02g071450.2.1	Tomato	cytosol	34.83	38.89
Solyc02g071500.2.1	Tomato	cytosol	34.08	38.7
Solyc02g071440.2.1	Tomato	cytosol	33.58	38.57
TraesCS3B01G497900.1	Wheat	cytosol	35.57	38.54
PGSC0003DMT400007990	Potato	nucleus	20.65	38.43
Solyc08g062370.2.1	Tomato	cytoskeleton, cytosol, peroxisome	16.92	38.2
KRG89247	Soybean	cytosol, peroxisome, plastid	22.14	37.71
PGSC0003DMT400055956	Potato	cytosol	16.67	37.64
KRH49750	Soybean	cytosol	32.84	37.61
Solyc02g071470.2.1	Tomato	cytosol	33.58	37.5
KRG89246	Soybean	cytosol	33.58	37.4
KRH49748	Soybean	cytosol	33.83	37.16
TraesCS1B01G345200.1	Wheat	cytosol	33.08	36.94
Solyc02g071480.2.1	Tomato	cytosol, nucleus, peroxisome	31.09	36.55
PGSC0003DMT400059406	Potato	peroxisome	21.89	36.07
KRH11118	Soybean	cytosol, nucleus, peroxisome, plastid	32.84	35.48
TraesCS5B01G466400.1	Wheat	cytosol	31.09	35.31
KRH21128	Soybean	cytosol	24.13	35.27
KRH58593	Soybean	cytosol, peroxisome, plastid	31.34	34.71
TraesCS3B01G520100.3	Wheat	cytosol	33.33	34.54
TraesCS1B01G332300.1	Wheat	cytosol	28.36	32.95
TraesCS5B01G224800.1	Wheat	cytosol, nucleus, peroxisome	25.37	32.8
TraesCS7B01G041900.1	Wheat	cytosol	29.1	32.77
TraesCS7B01G042000.1	Wheat	cytosol	20.65	31.68
TraesCS7B01G042400.2	Wheat	cytosol	27.86	31.55
TraesCS1B01G332200.1	Wheat	cytosol	27.61	31.36
Bra013884.1-P	Field mustard	cytosol	34.08	31.21
TraesCS5B01G224900.1	Wheat	cytosol	27.36	30.9
TraesCS7B01G042500.1	Wheat	cytosol	27.61	30.58
TraesCS7B01G042100.2	Wheat	cytosol	26.87	30.42
TraesCS6B01G351600.1	Wheat	cytosol	24.88	30.21
TraesCS6B01G145400.1	Wheat	cytosol	26.12	30.17
TraesCS6B01G412800.1	Wheat	cytosol	26.12	29.49
TraesCS7B01G042300.1	Wheat	cytosol	25.37	28.65
TraesCS6B01G412700.1	Wheat	cytosol	24.38	27.61
TraesCS5B01G282100.1	Wheat	golgi	25.12	27.45
TraesCS7B01G041600.1	Wheat	cytosol	24.63	26.47
TraesCS7B01G042200.3	Wheat	peroxisome	22.39	24.59

Protein Annotations

EnsemblPlants:TraesCS4B01G374100.2	EnsemblPlantsGene:TraesCS4B01G374100	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF360	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SUPFAM:SSF51197	MapMan:50.1.13	:	:	:

Description

No Description!

Coordinates

chr4B:+:658167816..658169659

Molecular Weight (calculated)

45492.9 Da

IEP (calculated)

7.134

GRAVY (calculated)

-0.234

Length

402 amino acids

Sequence
(BLAST)

001: MLLLRKEKTS WFVVFCDYMW TGFLNVKVLD ASVPASRCVK RCEVDRRLGT ILKEQEMASL PVPSVQAMVA ATGGADVPPR YLRPAEAVAG DSEAHIPIID
101: YQRLLLELEL DRHGEESARL HGACQDWGFF QLINHSVPDD VVEGMKASIQ QFFQLPMETK KQFAMERGQL EGYGQLFVFS EDQKLDWADI LYLYTQPHES
201: RNTKLWPDQP ANFRSMLDRY SGAVKDVSDS LLATMAKNLG LKREAIADKC IRGVQSVRMN YYPPCAQAEK VVGLSPHSDA GLLTLVLQVN HVQGLQIKRN
301: NRWLPVKPVP GAFIVNIGDM FEVFTNGRYK SIEHRAVVDP KEERLSVAAF HLPNIHAIIS PLKEIAAHED DGYKTLDHGS FMKLFYTTKL EGKSFLERLK
401: LN

Best Arabidopsis Sequence Match ( AT1G17010.1 )
(BLAST)

001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.