Factsheet for TraesCS1B01G332200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G320000.1	Wheat	cytosol	93.22	93.22
HORVU1Hr1G066370.1	Barley	cytosol, peroxisome	83.9	89.73
TraesCS1D01G319700.1	Wheat	cytosol	90.11	88.12
TraesCS1B01G332300.1	Wheat	cytosol	84.18	86.13
TraesCS7B01G041900.1	Wheat	cytosol	69.77	69.19
Zm00001d045145_P001	Maize	peroxisome	58.76	58.26
EER87956	Sorghum	peroxisome	59.04	57.58
TraesCS7B01G042000.1	Wheat	cytosol	41.24	55.73
TraesCS5B01G224800.1	Wheat	cytosol, nucleus, peroxisome	46.61	53.05
TraesCS7B01G042400.2	Wheat	cytosol	51.69	51.55
TraesCS7B01G042100.2	Wheat	cytosol	50.0	49.86
Bra002299.1-P	Field mustard	cytosol	21.47	49.67
TraesCS7B01G042300.1	Wheat	cytosol	49.44	49.16
TraesCS6B01G145400.1	Wheat	cytosol	48.02	48.85
TraesCS6B01G351600.1	Wheat	cytosol	45.2	48.34
TraesCS5B01G224900.1	Wheat	cytosol	48.31	48.03
Bra022690.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	30.51	48.0
CDY28799	Canola	cytoskeleton, cytosol, peroxisome	30.51	48.0
TraesCS6B01G412800.1	Wheat	cytosol	46.05	45.79
TraesCS7B01G042500.1	Wheat	cytosol	45.76	44.63
TraesCS6B01G412700.1	Wheat	cytosol	44.35	44.23
KRH60778	Soybean	cytosol, nucleus, peroxisome	44.07	43.82
TraesCS5B01G282100.1	Wheat	golgi	44.92	43.21
PGSC0003DMT400049392	Potato	cytosol	41.81	42.65
Solyc10g086780.1.1	Tomato	cytosol	37.29	42.58
PGSC0003DMT400049384	Potato	cytosol	33.33	41.99
VIT_11s0118g00400.t01	Wine grape	peroxisome	32.49	41.97
Bra002298.1-P	Field mustard	cytosol	41.24	41.95
AT5G54000.2	Thale cress	cytosol	41.24	41.83
CDX92465	Canola	cytosol	41.24	41.83
AT5G20550.1	Thale cress	cytosol	41.24	41.83
CDY63243	Canola	mitochondrion	17.8	41.72
CDY56860	Canola	cytosol	40.68	41.5
PGSC0003DMT400073345	Potato	cytosol	41.53	41.41
TraesCS7B01G042200.3	Wheat	peroxisome	42.66	41.26
AT5G20400.1	Thale cress	cytosol	40.4	41.09
VIT_11s0118g00360.t01	Wine grape	cytosol	46.05	40.95
Solyc06g068270.2.1	Tomato	nucleus	40.96	40.85
CDY51847	Canola	cytosol	40.11	40.8
KRH03607	Soybean	cytosol, peroxisome, plastid	40.4	40.74
Solyc10g076840.1.1	Tomato	cytosol	39.55	40.35
Bra006559.1-P	Field mustard	cytosol	39.83	40.29
TraesCS7B01G041600.1	Wheat	cytosol	42.09	39.84
CDY71604	Canola	cytosol	39.27	39.83
AT1G49390.1	Thale cress	cytosol	38.7	39.37
Solyc07g045040.2.1	Tomato	cytosol	38.7	38.92
VIT_09s0002g08090.t01	Wine grape	cytosol, nucleus, peroxisome	38.42	38.64
KRH51466	Soybean	peroxisome	35.03	38.15
VIT_11s0118g00390.t01	Wine grape	cytosol, nucleus, peroxisome	38.14	37.92
VIT_11s0118g00370.t01	Wine grape	plastid	33.62	36.96
KRH23597	Soybean	cytosol, peroxisome	33.9	35.29
TraesCS3B01G497900.1	Wheat	cytosol	36.44	34.77
TraesCS3B01G440500.1	Wheat	cytosol	34.18	32.79
TraesCS4B01G374200.1	Wheat	cytosol	32.2	32.76
TraesCS4B01G374300.1	Wheat	cytosol	31.92	32.38
TraesCS2B01G077500.1	Wheat	cytoskeleton, cytosol, peroxisome	33.05	32.23
TraesCS2B01G077600.1	Wheat	cytosol	33.05	31.79
TraesCS2B01G077800.1	Wheat	cytosol	32.77	31.69
TraesCS1B01G234500.1	Wheat	plastid	23.45	31.44
TraesCS4B01G335300.2	Wheat	cytosol	30.79	30.03
TraesCS3B01G592000.1	Wheat	cytosol	31.92	29.82
PGSC0003DMT400044918	Potato	cytosol	18.93	29.13
TraesCS4B01G374100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	31.36	27.61
TraesCS5B01G466400.1	Wheat	cytosol	27.4	27.4
TraesCS1B01G345200.1	Wheat	cytosol	26.27	25.83
TraesCS3B01G520100.3	Wheat	cytosol	28.25	25.77

Protein Annotations

EnsemblPlants:TraesCS1B01G332200.1	EnsemblPlantsGene:TraesCS1B01G332200	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF373	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:50.1.13	:	:

Description

No Description!

Coordinates

chr1B:+:558284433..558285857

Molecular Weight (calculated)

40206.1 Da

IEP (calculated)

5.657

GRAVY (calculated)

-0.350

Length

354 amino acids

Sequence
(BLAST)

001: MGRKGTFQMP VQELAGALST PDVPAQYIAR AHEDQQLAAV VVAPVLVIDL VRLSKHGDDT SDEAAKLWSA IESWGLFMVS NHGVDAVMDN MMAASREFFG
101: QPLKEKQRYT NLNGGERFQF EGYGNDRVNS PDQIRDWTDR LYLKVEPEDE RSIALWPARP ETFRNALHEY TKKCGEVKND VLRAMAKLLE LDDDDYFVEH
201: FGEKPLTDVR CSYYPVCPRP ELVFGLKPHS DATVVTVLMV HDRVGGLQVL KDGVWWDVPI VPHTLLMIIG DQTEIMSNGI FKSPVHRVVT NTKKERLSVA
301: LDYYVDPERE IEPSAQLVNE KRPALYSKVK VKDYFARSYN AFTQGKMVID TVKI

Best Arabidopsis Sequence Match ( AT1G49390.1 )
(BLAST)

001: MEKPKFKTVQ EVVAAGQGLP ERYLHAPTGE GESQPLNGAV PEMDIPAIDL SLLFSSSVDG QEEMKKLHSA LSTWGVVQVM NHGITEAFLD KIYKLTKQFF
101: ALPTEEKHKC ARETGNIQGY GNDMILSDNQ VLDWIDRLFL TTYPEDKRQL KFWPQVPVGF SETLDEYTMK QRVLIEKFFK AMARSLELEE NCFLEMYGEN
201: AVMNSRFNFF PPCPRPDKVI GIKPHADGSA ITLLLPDKDV EGLQFLKDGK WYKAPIVPDT ILITLGDQME IMSNGIYKSP VHRVVTNREK ERISVATFCV
301: PGLDKEIHPA DGLVTEARPR LYKTVTKYVD LHYKYYQQGR RTIEAALI

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XIA5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.